RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 C1orf167Q5SNV9 1468 aa36.25■■■■□ 3.39
LSM7-201ENST00000252622 NEUROD1Q13562 356 aa36.25■■■■□ 3.39
LSM7-201ENST00000252622 COL16A1Q07092 1604 aaPredicted RBP36.21■■■■□ 3.39
LSM7-201ENST00000252622 PRAM1Q96QH2 718 aa36.2■■■■□ 3.39
LSM7-201ENST00000252622 TRAK1Q9UPV9 953 aa36.18■■■■□ 3.38
LSM7-201ENST00000252622 NHSL1Q5SYE7 1610 aa36.17■■■■□ 3.38
LSM7-201ENST00000252622 MED1Q15648 1581 aaPredicted RBP36.15■■■■□ 3.38
LSM7-201ENST00000252622 PCGF6Q9BYE7 350 aa36.15■■■■□ 3.38
LSM7-201ENST00000252622 POGKQ9P215 609 aa36.15■■■■□ 3.38
LSM7-201ENST00000252622 FMN2Q9NZ56 1722 aa36.14■■■■□ 3.38
LSM7-201ENST00000252622 ARHGEF28Q8N1W1 1705 aaKnown RBP36.12■■■■□ 3.37
LSM7-201ENST00000252622 ADGRB2O60241 1585 aa36.12■■■■□ 3.37
LSM7-201ENST00000252622 DISP3Q9P2K9 1392 aa36.11■■■■□ 3.37
LSM7-201ENST00000252622 SAFB2Q14151 953 aaKnown RBP eCLIP36.1■■■■□ 3.37
LSM7-201ENST00000252622 JCADQ9P266 1359 aa36.1■■■■□ 3.37
LSM7-201ENST00000252622 NBPF1Q3BBV0 1214 aa36.08■■■■□ 3.37
LSM7-201ENST00000252622 ORAI2Q96SN7 254 aa36.08■■■■□ 3.37
LSM7-201ENST00000252622 TONSLQ96HA7 1378 aa36.06■■■■□ 3.36
LSM7-201ENST00000252622 TRPM1Q7Z4N2 1603 aa36.05■■■■□ 3.36
LSM7-201ENST00000252622 ESCO1Q5FWF5 840 aa36.01■■■■□ 3.36
LSM7-201ENST00000252622 SHPRHQ149N8 1683 aa36■■■■□ 3.35
LSM7-201ENST00000252622 NUTM2FA1L443 756 aa36■■■■□ 3.35
LSM7-201ENST00000252622 DDX17Q92841 729 aaKnown RBP35.99■■■■□ 3.35
LSM7-201ENST00000252622 MINK1Q8N4C8 1332 aaPredicted RBP35.98■■■■□ 3.35
LSM7-201ENST00000252622 ANKARQ7Z5J8 1434 aa35.98■■■■□ 3.35
LSM7-201ENST00000252622 KIF1AQ12756 1690 aa35.97■■■■□ 3.35
LSM7-201ENST00000252622 SOS2Q07890 1332 aaPredicted RBP35.96■■■■□ 3.35
LSM7-201ENST00000252622 EIF3AQ14152 1382 aaKnown RBP35.96■■■■□ 3.35
LSM7-201ENST00000252622 LRRC59Q96AG4 307 aaKnown RBP35.95■■■■□ 3.35
LSM7-201ENST00000252622 HIRIP3Q9BW71 556 aaPredicted RBP35.95■■■■□ 3.35
LSM7-201ENST00000252622 SPATA31A6Q5VVP1 1343 aa35.94■■■■□ 3.34
LSM7-201ENST00000252622 NPHP3Q7Z494 1330 aa35.94■■■■□ 3.34
LSM7-201ENST00000252622 ROCK2O75116 1388 aaKnown RBP35.93■■■■□ 3.34
LSM7-201ENST00000252622 CLSPNQ9HAW4 1339 aa35.93■■■■□ 3.34
LSM7-201ENST00000252622 NBPF8Q3BBV2 869 aa35.93■■■■□ 3.34
LSM7-201ENST00000252622 USP32Q8NFA0 1604 aa35.92■■■■□ 3.34
LSM7-201ENST00000252622 TULP4Q9NRJ4 1543 aa35.92■■■■□ 3.34
LSM7-201ENST00000252622 WASLO00401 505 aaPredicted RBP35.91■■■■□ 3.34
LSM7-201ENST00000252622 GPRASP1Q5JY77 1395 aa35.9■■■■□ 3.34
LSM7-201ENST00000252622 PXDNQ92626 1479 aa35.9■■■■□ 3.34
LSM7-201ENST00000252622 RGPD8O14715 1765 aaPredicted RBP35.89■■■■□ 3.34
LSM7-201ENST00000252622 CENPJQ9HC77 1338 aaPredicted RBP35.87■■■■□ 3.33
LSM7-201ENST00000252622 PNPLA6Q8IY17 1366 aa35.87■■■■□ 3.33
LSM7-201ENST00000252622 FOXO3O43524 673 aa35.86■■■■□ 3.33
LSM7-201ENST00000252622 PHF23Q9BUL5 403 aaPredicted RBP35.86■■■■□ 3.33
LSM7-201ENST00000252622 PHF8Q9UPP1 1060 aa35.86■■■■□ 3.33
LSM7-201ENST00000252622 RALGAPBQ86X10 1494 aa35.86■■■■□ 3.33
LSM7-201ENST00000252622 LRP6O75581 1613 aa35.84■■■■□ 3.33
LSM7-201ENST00000252622 PRR36Q9H6K5 1346 aa35.83■■■■□ 3.33
LSM7-201ENST00000252622 QRICH2Q9H0J4 1663 aa35.81■■■■□ 3.32
LSM7-201ENST00000252622 ATP7BP35670 1465 aa35.8■■■■□ 3.32
LSM7-201ENST00000252622 XPCQ01831 940 aaPredicted RBP35.76■■■■□ 3.32
LSM7-201ENST00000252622 CDK19Q9BWU1 502 aa35.76■■■■□ 3.32
LSM7-201ENST00000252622 COL22A1Q8NFW1 1626 aaPredicted RBP35.75■■■■□ 3.31
LSM7-201ENST00000252622 ITSN1Q15811 1721 aa35.75■■■■□ 3.31
LSM7-201ENST00000252622 TIMELESSQ9UNS1 1208 aa35.75■■■■□ 3.31
LSM7-201ENST00000252622 KRT28Q7Z3Y7 464 aa35.73■■■■□ 3.31
LSM7-201ENST00000252622 CARD11Q9BXL7 1154 aa35.73■■■■□ 3.31
LSM7-201ENST00000252622 PMFBP1Q8TBY8 1022 aa35.72■■■■□ 3.31
LSM7-201ENST00000252622 NUDT16Q96DE0 195 aaKnown RBP35.72■■■■□ 3.31
LSM7-201ENST00000252622 NUTM2BA6NNL0 878 aaPredicted RBP35.7■■■■□ 3.31
LSM7-201ENST00000252622 NUTM2EB1AL46 878 aaPredicted RBP35.7■■■■□ 3.31
LSM7-201ENST00000252622 ILDR2Q71H61 639 aa35.7■■■■□ 3.31
LSM7-201ENST00000252622 NUTM2AQ8IVF1 878 aaPredicted RBP35.7■■■■□ 3.31
LSM7-201ENST00000252622 TOPAZ1Q8N9V7 1692 aa35.7■■■■□ 3.31
LSM7-201ENST00000252622 SPATA31A3Q5VYP0 1347 aa35.69■■■■□ 3.3
LSM7-201ENST00000252622 PSME1Q06323 249 aa35.69■■■■□ 3.3
LSM7-201ENST00000252622 MEX3CQ5U5Q3 659 aaKnown RBP35.69■■■■□ 3.3
LSM7-201ENST00000252622 RGS17Q9UGC6 210 aaPredicted RBP35.69■■■■□ 3.3
LSM7-201ENST00000252622 SBNO1A3KN83 1393 aa35.68■■■■□ 3.3
LSM7-201ENST00000252622 TNS3Q68CZ2 1445 aa35.67■■■■□ 3.3
LSM7-201ENST00000252622 CCER1Q8TC90 406 aaPredicted RBP35.67■■■■□ 3.3
LSM7-201ENST00000252622 CCDC61Q9Y6R9 512 aa35.65■■■■□ 3.3
LSM7-201ENST00000252622 SBNO2Q9Y2G9 1366 aa35.64■■■■□ 3.3
LSM7-201ENST00000252622 SRPK2P78362 688 aaKnown RBP35.63■■■■□ 3.29
LSM7-201ENST00000252622 TRPM3Q9HCF6 1732 aaPredicted RBP35.62■■■■□ 3.29
LSM7-201ENST00000252622 EVC2Q86UK5 1308 aa35.61■■■■□ 3.29
LSM7-201ENST00000252622 NGDNQ8NEJ9 315 aaKnown RBP35.61■■■■□ 3.29
LSM7-201ENST00000252622 CABP2Q9NPB3 220 aa35.59■■■■□ 3.29
LSM7-201ENST00000252622 POLR3AO14802 1390 aaPredicted RBP35.59■■■■□ 3.29
LSM7-201ENST00000252622 PLEKHG3A1L390 1219 aa35.58■■■■□ 3.29
LSM7-201ENST00000252622 ARHGEF10O15013 1369 aa35.58■■■■□ 3.29
LSM7-201ENST00000252622 PPIP5K1Q6PFW1 1433 aa35.56■■■■□ 3.28
LSM7-201ENST00000252622 ADAMTS2O95450 1211 aa35.53■■■■□ 3.28
LSM7-201ENST00000252622 ACEP12821 1306 aa35.53■■■■□ 3.28
LSM7-201ENST00000252622 ALS2Q96Q42 1657 aa35.52■■■■□ 3.28
LSM7-201ENST00000252622 ZNF772Q68DY9 489 aaPredicted RBP35.52■■■■□ 3.28
LSM7-201ENST00000252622 POTEAQ6S8J7 498 aa35.52■■■■□ 3.28
LSM7-201ENST00000252622 C8orf37Q96NL8 207 aa35.51■■■■□ 3.28
LSM7-201ENST00000252622 AFF2P51816 1311 aa35.49■■■■□ 3.27
LSM7-201ENST00000252622 LMOD2Q6P5Q4 547 aa35.48■■■■□ 3.27
LSM7-201ENST00000252622 ATAD2Q6PL18 1390 aa35.47■■■■□ 3.27
LSM7-201ENST00000252622 MARF1Q9Y4F3 1742 aaKnown RBP35.46■■■■□ 3.27
LSM7-201ENST00000252622 ABCA3Q99758 1704 aa35.45■■■■□ 3.27
LSM7-201ENST00000252622 CABP1Q9NZU7 370 aa35.44■■■■□ 3.26
LSM7-201ENST00000252622 NGLY1Q96IV0 654 aa35.43■■■■□ 3.26
LSM7-201ENST00000252622 USP47Q96K76 1375 aa35.42■■■■□ 3.26
LSM7-201ENST00000252622 PAK3O75914 559 aaPredicted RBP35.42■■■■□ 3.26
LSM7-201ENST00000252622 BRD4O60885 1362 aaPredicted RBP35.41■■■■□ 3.26
LSM7-201ENST00000252622 ST20-MTHFSA0A0A6YYL1 179 aa35.41■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms