RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 KNSTRNQ9Y448 316 aa16.38■□□□□ 0.21
COLGALT1-201ENST00000252599 C10orf67Q8IYJ2 551 aa16.38■□□□□ 0.21
COLGALT1-201ENST00000252599 CEP83Q9Y592 693 aa16.37■□□□□ 0.21
COLGALT1-201ENST00000252599 ANKRD30AQ9BXX3 1397 aa16.37■□□□□ 0.21
COLGALT1-201ENST00000252599 PTPRGP23470 1445 aa16.37■□□□□ 0.21
COLGALT1-201ENST00000252599 AFAP1Q8N556 730 aa16.37■□□□□ 0.21
COLGALT1-201ENST00000252599 PPP6R1Q9UPN7 881 aa16.37■□□□□ 0.21
COLGALT1-201ENST00000252599 BIRC2Q13490 618 aa16.37■□□□□ 0.21
COLGALT1-201ENST00000252599 CCDC146Q8IYE0 955 aa16.37■□□□□ 0.21
COLGALT1-201ENST00000252599 FAM212AQ96EL1 285 aa16.37■□□□□ 0.21
COLGALT1-201ENST00000252599 U2AF2P26368 475 aaKnown RBP eCLIP16.36■□□□□ 0.21
COLGALT1-201ENST00000252599 MCM4P33991 863 aa16.36■□□□□ 0.21
COLGALT1-201ENST00000252599 FAM161AQ3B820 660 aa16.35■□□□□ 0.21
COLGALT1-201ENST00000252599 GEMIN8Q9NWZ8 242 aaKnown RBP16.35■□□□□ 0.21
COLGALT1-201ENST00000252599 VGFO15240 615 aaPredicted RBP16.35■□□□□ 0.21
COLGALT1-201ENST00000252599 GTF2F1P35269 517 aaKnown RBP eCLIP16.35■□□□□ 0.212e-8■■■■■ 31.9
COLGALT1-201ENST00000252599 HMGN5P82970 282 aaKnown RBP16.35■□□□□ 0.21
COLGALT1-201ENST00000252599 LRCH2Q5VUJ6 765 aa16.35■□□□□ 0.21
COLGALT1-201ENST00000252599 H0YHG0 523 aa16.34■□□□□ 0.21
COLGALT1-201ENST00000252599 SARNPP82979 210 aaKnown RBP16.34■□□□□ 0.21
COLGALT1-201ENST00000252599 PPP2R5AQ15172 486 aa16.34■□□□□ 0.21
COLGALT1-201ENST00000252599 PANK3Q9H999 370 aa16.34■□□□□ 0.21
COLGALT1-201ENST00000252599 MAP2K1Q02750 393 aaPredicted RBP16.34■□□□□ 0.21
COLGALT1-201ENST00000252599 EGFL6Q8IUX8 553 aa16.34■□□□□ 0.21
COLGALT1-201ENST00000252599 DDX11L8A8MPP1 907 aa16.33■□□□□ 0.21
COLGALT1-201ENST00000252599 RASSF4Q9H2L5 321 aa16.32■□□□□ 0.2
COLGALT1-201ENST00000252599 ESF1Q9H501 851 aaKnown RBP16.32■□□□□ 0.2
COLGALT1-201ENST00000252599 EFCAB2Q5VUJ9 269 aa16.32■□□□□ 0.2
COLGALT1-201ENST00000252599 ABCA10Q8WWZ4 1543 aa16.31■□□□□ 0.2
COLGALT1-201ENST00000252599 CCDC172P0C7W6 258 aa16.31■□□□□ 0.2
COLGALT1-201ENST00000252599 PSEN1P49768 467 aa16.31■□□□□ 0.2
COLGALT1-201ENST00000252599 SATB1Q01826 763 aa16.31■□□□□ 0.2
COLGALT1-201ENST00000252599 GBP4Q96PP9 640 aa16.31■□□□□ 0.2
COLGALT1-201ENST00000252599 PAIP2Q9BPZ3 127 aaKnown RBP16.31■□□□□ 0.2
COLGALT1-201ENST00000252599 PRDM16Q9HAZ2 1276 aa16.31■□□□□ 0.2
COLGALT1-201ENST00000252599 DNMBPQ6XZF7 1577 aa16.3■□□□□ 0.2
COLGALT1-201ENST00000252599 CARD10Q9BWT7 1032 aa16.3■□□□□ 0.2
COLGALT1-201ENST00000252599 DDX49Q9Y6V7 483 aaKnown RBP16.3■□□□□ 0.2
COLGALT1-201ENST00000252599 TERF1P54274 439 aa16.3■□□□□ 0.2
COLGALT1-201ENST00000252599 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
COLGALT1-201ENST00000252599 ATP2B3Q16720 1220 aa16.29■□□□□ 0.2
COLGALT1-201ENST00000252599 NOM1Q5C9Z4 860 aaKnown RBP16.29■□□□□ 0.2
COLGALT1-201ENST00000252599 TTLL5Q6EMB2 1281 aa16.29■□□□□ 0.2
COLGALT1-201ENST00000252599 RNF217Q8TC41 542 aa16.29■□□□□ 0.2
COLGALT1-201ENST00000252599 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
COLGALT1-201ENST00000252599 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
COLGALT1-201ENST00000252599 PLB1Q6P1J6 1458 aa16.28■□□□□ 0.2
COLGALT1-201ENST00000252599 TMF1P82094 1093 aa16.28■□□□□ 0.2
COLGALT1-201ENST00000252599 KTN1Q86UP2 1357 aaKnown RBP16.28■□□□□ 0.2
COLGALT1-201ENST00000252599 PNISRQ8TF01 805 aaKnown RBP16.27■□□□□ 0.2
COLGALT1-201ENST00000252599 NOL10Q9BSC4 688 aaKnown RBP16.27■□□□□ 0.2
COLGALT1-201ENST00000252599 EFCC1Q9HA90 598 aa16.27■□□□□ 0.2
COLGALT1-201ENST00000252599 POLD1P28340 1107 aa16.27■□□□□ 0.19
COLGALT1-201ENST00000252599 NLRP13Q86W25 1043 aa16.27■□□□□ 0.19
COLGALT1-201ENST00000252599 SLC26A8Q96RN1 970 aa16.27■□□□□ 0.19
COLGALT1-201ENST00000252599 ZNF853P0CG23 659 aa16.27■□□□□ 0.19
COLGALT1-201ENST00000252599 SPAG9O60271 1321 aaKnown RBP16.26■□□□□ 0.19
COLGALT1-201ENST00000252599 RRP1P56182 461 aaKnown RBP16.26■□□□□ 0.19
COLGALT1-201ENST00000252599 SETQ01105 290 aaPredicted RBP16.26■□□□□ 0.19
COLGALT1-201ENST00000252599 JARID2Q92833 1246 aaPredicted RBP16.26■□□□□ 0.19
COLGALT1-201ENST00000252599 CRBNQ96SW2 442 aa16.26■□□□□ 0.19
COLGALT1-201ENST00000252599 TRAK1Q9UPV9 953 aa16.26■□□□□ 0.19
COLGALT1-201ENST00000252599 MMP14P50281 582 aa16.26■□□□□ 0.19
COLGALT1-201ENST00000252599 CYB5RLQ6IPT4 315 aa16.26■□□□□ 0.19
COLGALT1-201ENST00000252599 RBM28Q9NW13 759 aaKnown RBP16.26■□□□□ 0.19
COLGALT1-201ENST00000252599 ANKRD30BQ9BXX2 1392 aa16.25■□□□□ 0.19
COLGALT1-201ENST00000252599 PTPN23Q9H3S7 1636 aa16.25■□□□□ 0.19
COLGALT1-201ENST00000252599 CT47A1Q5JQC4 288 aaPredicted RBP16.25■□□□□ 0.19
COLGALT1-201ENST00000252599 NCAPGQ9BPX3 1015 aa16.25■□□□□ 0.19
COLGALT1-201ENST00000252599 SH3BP1Q9Y3L3 701 aa16.25■□□□□ 0.19
COLGALT1-201ENST00000252599 EFCAB5A4FU69 1503 aa16.25■□□□□ 0.19
COLGALT1-201ENST00000252599 EPRSP07814 1512 aaKnown RBP16.25■□□□□ 0.19
COLGALT1-201ENST00000252599 TERF2IPQ9NYB0 399 aa16.25■□□□□ 0.19
COLGALT1-201ENST00000252599 CTR9Q6PD62 1173 aa16.24■□□□□ 0.19
COLGALT1-201ENST00000252599 MYBBP1AQ9BQG0 1328 aaKnown RBP16.24■□□□□ 0.19
COLGALT1-201ENST00000252599 MAP3K1Q13233 1512 aa16.24■□□□□ 0.19
COLGALT1-201ENST00000252599 SART3Q15020 963 aaKnown RBP16.24■□□□□ 0.19
COLGALT1-201ENST00000252599 E2F4Q16254 413 aa16.24■□□□□ 0.19
COLGALT1-201ENST00000252599 HSP90AB1P08238 724 aaKnown RBP16.23■□□□□ 0.19
COLGALT1-201ENST00000252599 CCDC97Q96F63 343 aaPredicted RBP16.23■□□□□ 0.19
COLGALT1-201ENST00000252599 KIF15Q9NS87 1388 aa16.23■□□□□ 0.19
COLGALT1-201ENST00000252599 RPAINQ86UA6 219 aa16.23■□□□□ 0.19
COLGALT1-201ENST00000252599 ANKRD50Q9ULJ7 1429 aa16.23■□□□□ 0.19
COLGALT1-201ENST00000252599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.23■□□□□ 0.193e-7■■□□□ 13.5
COLGALT1-201ENST00000252599 HSCBQ8IWL3 235 aa16.23■□□□□ 0.19
COLGALT1-201ENST00000252599 TEX35Q5T0J7 233 aa16.22■□□□□ 0.19
COLGALT1-201ENST00000252599 CASC1Q6TDU7 716 aa16.22■□□□□ 0.19
COLGALT1-201ENST00000252599 PRPF38AQ8NAV1 312 aaKnown RBP16.22■□□□□ 0.19
COLGALT1-201ENST00000252599 RNF214Q8ND24 703 aa16.22■□□□□ 0.19
COLGALT1-201ENST00000252599 CHMP5Q9NZZ3 219 aa16.22■□□□□ 0.19
COLGALT1-201ENST00000252599 DNAJC21Q5F1R6 531 aaKnown RBP16.22■□□□□ 0.19
COLGALT1-201ENST00000252599 ISY1Q9ULR0 285 aaKnown RBP16.22■□□□□ 0.19
COLGALT1-201ENST00000252599 RRP7AQ9Y3A4 280 aaKnown RBP16.22■□□□□ 0.19
COLGALT1-201ENST00000252599 DAPK1P53355 1430 aa16.22■□□□□ 0.19
COLGALT1-201ENST00000252599 NUTM2FA1L443 756 aa16.21■□□□□ 0.19
COLGALT1-201ENST00000252599 CT47B1P0C2W7 299 aaPredicted RBP16.21■□□□□ 0.19
COLGALT1-201ENST00000252599 YY1AP1Q9H869 796 aa16.21■□□□□ 0.19
COLGALT1-201ENST00000252599 KAT6BQ8WYB5 2073 aa16.21■□□□□ 0.19
COLGALT1-201ENST00000252599 IRF6O14896 467 aa16.21■□□□□ 0.19
COLGALT1-201ENST00000252599 DIAPH3Q9NSV4 1193 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms