RNA–Protein interactions for RNA: ENST00000252244.3

KRT1-201, Transcript of keratin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT1, Length 2,451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1-201ENST00000252244 TMEM131LA2VDJ0 1609 aa25.8■■□□□ 1.72
KRT1-201ENST00000252244 CRBNQ96SW2 442 aa25.8■■□□□ 1.72
KRT1-201ENST00000252244 POLR3AO14802 1390 aaPredicted RBP25.79■■□□□ 1.72
KRT1-201ENST00000252244 SLFN5Q08AF3 891 aa25.78■■□□□ 1.72
KRT1-201ENST00000252244 ZFYVE9O95405 1425 aa25.78■■□□□ 1.72
KRT1-201ENST00000252244 CABP2Q9NPB3 220 aa25.78■■□□□ 1.72
KRT1-201ENST00000252244 C20orf194Q5TEA3 1177 aa25.77■■□□□ 1.72
KRT1-201ENST00000252244 SPINK5Q9NQ38 1064 aaPredicted RBP25.76■■□□□ 1.71
KRT1-201ENST00000252244 CGNL1Q0VF96 1302 aa25.74■■□□□ 1.71
KRT1-201ENST00000252244 USP32Q8NFA0 1604 aa25.73■■□□□ 1.71
KRT1-201ENST00000252244 PUS7Q96PZ0 661 aaKnown RBP25.73■■□□□ 1.71
KRT1-201ENST00000252244 SHPRHQ149N8 1683 aa25.72■■□□□ 1.71
KRT1-201ENST00000252244 TRMT2AQ8IZ69 625 aaKnown RBP25.72■■□□□ 1.71
KRT1-201ENST00000252244 ANKRD36BQ8N2N9 1353 aa25.72■■□□□ 1.71
KRT1-201ENST00000252244 DMRT2Q9Y5R5 561 aa25.71■■□□□ 1.71
KRT1-201ENST00000252244 MTHFSP49914 203 aa25.69■■□□□ 1.7
KRT1-201ENST00000252244 SRPK2P78362 688 aaKnown RBP25.68■■□□□ 1.7
KRT1-201ENST00000252244 STAG3Q9UJ98 1225 aa25.68■■□□□ 1.7
KRT1-201ENST00000252244 PTPRMP28827 1452 aa25.67■■□□□ 1.7
KRT1-201ENST00000252244 PRAM1Q96QH2 718 aa25.66■■□□□ 1.7
KRT1-201ENST00000252244 MINK1Q8N4C8 1332 aaPredicted RBP25.66■■□□□ 1.7
KRT1-201ENST00000252244 NKTRP30414 1462 aaKnown RBP25.66■■□□□ 1.7
KRT1-201ENST00000252244 E9PSI1 815 aa25.66■■□□□ 1.7
KRT1-201ENST00000252244 CLTCQ00610 1675 aaKnown RBP25.65■■□□□ 1.7
KRT1-201ENST00000252244 YTHDC2Q9H6S0 1430 aaKnown RBP25.65■■□□□ 1.7
KRT1-201ENST00000252244 MLECQ14165 292 aa25.64■■□□□ 1.69
KRT1-201ENST00000252244 POGKQ9P215 609 aa25.64■■□□□ 1.69
KRT1-201ENST00000252244 NGEFQ8N5V2 710 aa25.63■■□□□ 1.69
KRT1-201ENST00000252244 REREQ9P2R6 1566 aa25.63■■□□□ 1.69
KRT1-201ENST00000252244 NEUROD2Q15784 382 aa25.63■■□□□ 1.69
KRT1-201ENST00000252244 WWC1Q8IX03 1113 aa25.63■■□□□ 1.69
KRT1-201ENST00000252244 A0A1W2PP64 1363 aa25.63■■□□□ 1.69
KRT1-201ENST00000252244 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.62■■□□□ 1.69
KRT1-201ENST00000252244 AGLP35573 1532 aa25.62■■□□□ 1.69
KRT1-201ENST00000252244 ALKQ9UM73 1620 aa25.62■■□□□ 1.69
KRT1-201ENST00000252244 ERICH6Q7L0X2 663 aa25.62■■□□□ 1.69
KRT1-201ENST00000252244 RRP7AQ9Y3A4 280 aaKnown RBP25.62■■□□□ 1.69
KRT1-201ENST00000252244 NSD2O96028 1365 aa25.61■■□□□ 1.69
KRT1-201ENST00000252244 TCERG1O14776 1098 aaKnown RBP25.61■■□□□ 1.69
KRT1-201ENST00000252244 RUNDC1Q96C34 613 aa25.61■■□□□ 1.69
KRT1-201ENST00000252244 CFAP53Q96M91 514 aa25.61■■□□□ 1.69
KRT1-201ENST00000252244 BCAR3O75815 825 aa25.59■■□□□ 1.69
KRT1-201ENST00000252244 SKAP1Q86WV1 359 aa25.59■■□□□ 1.69
KRT1-201ENST00000252244 TCP11L2Q8N4U5 519 aa25.58■■□□□ 1.69
KRT1-201ENST00000252244 PPP6R1Q9UPN7 881 aa25.58■■□□□ 1.69
KRT1-201ENST00000252244 ABCC11Q96J66 1382 aa25.58■■□□□ 1.68
KRT1-201ENST00000252244 NINLQ9Y2I6 1382 aa25.58■■□□□ 1.68
KRT1-201ENST00000252244 GGNBP2Q9H3C7 697 aa25.56■■□□□ 1.68
KRT1-201ENST00000252244 ATAD2Q6PL18 1390 aa25.56■■□□□ 1.68
KRT1-201ENST00000252244 IQSEC2Q5JU85 1478 aa25.56■■□□□ 1.68
KRT1-201ENST00000252244 A2ML1A8K2U0 1454 aa25.55■■□□□ 1.68
KRT1-201ENST00000252244 SPATA31D1Q6ZQQ2 1576 aa25.53■■□□□ 1.68
KRT1-201ENST00000252244 CDK19Q9BWU1 502 aa25.53■■□□□ 1.68
KRT1-201ENST00000252244 TERF2IPQ9NYB0 399 aa25.53■■□□□ 1.68
KRT1-201ENST00000252244 U2AF1L5P0DN76 240 aaPredicted RBP25.52■■□□□ 1.68
KRT1-201ENST00000252244 ANP32AP39687 249 aaKnown RBP25.52■■□□□ 1.68
KRT1-201ENST00000252244 U2AF1Q01081 240 aaKnown RBP eCLIP25.52■■□□□ 1.68
KRT1-201ENST00000252244 CD163L1Q9NR16 1453 aa25.52■■□□□ 1.68
KRT1-201ENST00000252244 KDM2BQ8NHM5 1336 aa25.52■■□□□ 1.68
KRT1-201ENST00000252244 PDE4AP27815 886 aa25.52■■□□□ 1.68
KRT1-201ENST00000252244 MS4A1P11836 297 aa25.51■■□□□ 1.67
KRT1-201ENST00000252244 RIMS2Q9UQ26 1411 aa25.51■■□□□ 1.67
KRT1-201ENST00000252244 FYB1O15117 783 aa25.49■■□□□ 1.67
KRT1-201ENST00000252244 PHF23Q9BUL5 403 aaPredicted RBP25.49■■□□□ 1.67
KRT1-201ENST00000252244 ARHGEF40Q8TER5 1519 aa25.49■■□□□ 1.67
KRT1-201ENST00000252244 WAPLQ7Z5K2 1190 aa25.49■■□□□ 1.67
KRT1-201ENST00000252244 KIF13AQ9H1H9 1805 aa25.48■■□□□ 1.67
KRT1-201ENST00000252244 BACH2Q9BYV9 841 aa25.47■■□□□ 1.67
KRT1-201ENST00000252244 CABP1Q9NZU7 370 aa25.47■■□□□ 1.67
KRT1-201ENST00000252244 CENPQQ7L2Z9 268 aaPredicted RBP25.47■■□□□ 1.67
KRT1-201ENST00000252244 NOP58Q9Y2X3 529 aaKnown RBP25.46■■□□□ 1.67
KRT1-201ENST00000252244 HDGFL2Q7Z4V5 671 aaPredicted RBP25.46■■□□□ 1.67
KRT1-201ENST00000252244 NLRP1Q9C000 1473 aa25.45■■□□□ 1.67
KRT1-201ENST00000252244 SETD1AO15047 1707 aaKnown RBP25.45■■□□□ 1.66
KRT1-201ENST00000252244 ANKRD26Q9UPS8 1709 aa25.45■■□□□ 1.66
KRT1-201ENST00000252244 PAK3O75914 559 aaPredicted RBP25.45■■□□□ 1.66
KRT1-201ENST00000252244 WDR63Q8IWG1 891 aa25.45■■□□□ 1.66
KRT1-201ENST00000252244 IPO9Q96P70 1041 aaKnown RBP25.44■■□□□ 1.66
KRT1-201ENST00000252244 U2SURPO15042 1029 aaKnown RBP25.44■■□□□ 1.66
KRT1-201ENST00000252244 NPM2Q86SE8 214 aaKnown RBP25.43■■□□□ 1.66
KRT1-201ENST00000252244 CCDC27Q2M243 656 aa25.43■■□□□ 1.66
KRT1-201ENST00000252244 ESF1Q9H501 851 aaKnown RBP25.42■■□□□ 1.66
KRT1-201ENST00000252244 CANXP27824 592 aaKnown RBP25.42■■□□□ 1.66
KRT1-201ENST00000252244 DLC1Q96QB1 1528 aa25.41■■□□□ 1.66
KRT1-201ENST00000252244 COL3A1P02461 1466 aaPredicted RBP25.41■■□□□ 1.66
KRT1-201ENST00000252244 ZMYM3Q14202 1370 aa25.41■■□□□ 1.66
KRT1-201ENST00000252244 MED14O60244 1454 aa25.4■■□□□ 1.66
KRT1-201ENST00000252244 ADGRB2O60241 1585 aa25.4■■□□□ 1.66
KRT1-201ENST00000252244 PANK1Q8TE04 598 aa25.39■■□□□ 1.66
KRT1-201ENST00000252244 FRAT1Q92837 279 aaPredicted RBP25.39■■□□□ 1.66
KRT1-201ENST00000252244 RARSP54136 660 aaKnown RBP25.39■■□□□ 1.65
KRT1-201ENST00000252244 PDE3AQ14432 1141 aa25.39■■□□□ 1.65
KRT1-201ENST00000252244 KIF20BQ96Q89 1820 aa25.38■■□□□ 1.65
KRT1-201ENST00000252244 NRXN3Q9Y4C0 1643 aa25.38■■□□□ 1.65
KRT1-201ENST00000252244 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.38■■□□□ 1.65
KRT1-201ENST00000252244 PLEKHF1Q96S99 279 aa25.37■■□□□ 1.65
KRT1-201ENST00000252244 METP08581 1390 aa25.37■■□□□ 1.65
KRT1-201ENST00000252244 COG6Q9Y2V7 657 aa25.36■■□□□ 1.65
KRT1-201ENST00000252244 BCL2L13Q9BXK5 485 aa25.35■■□□□ 1.65
KRT1-201ENST00000252244 NCBP3Q53F19 620 aaKnown RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms