RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 BCAR3O75815 825 aa5.86□□□□□ -1.47
RAP1B-201ENST00000250559 MSNP26038 577 aaKnown RBP5.86□□□□□ -1.47
RAP1B-201ENST00000250559 MTHFSP49914 203 aa5.86□□□□□ -1.47
RAP1B-201ENST00000250559 PLB1Q6P1J6 1458 aa5.86□□□□□ -1.47
RAP1B-201ENST00000250559 CHRNA2Q15822 529 aa5.86□□□□□ -1.47
RAP1B-201ENST00000250559 CTDP1Q9Y5B0 961 aaPredicted RBP5.86□□□□□ -1.47
RAP1B-201ENST00000250559 C11orf95C9JLR9 678 aaPredicted RBP5.86□□□□□ -1.47
RAP1B-201ENST00000250559 PRDM11Q9NQV5 511 aa5.85□□□□□ -1.47
RAP1B-201ENST00000250559 SUPT6HQ7KZ85 1726 aaKnown RBP5.85□□□□□ -1.47
RAP1B-201ENST00000250559 ERICH6BQ5W0A0 696 aa5.85□□□□□ -1.47
RAP1B-201ENST00000250559 KIAA1211Q6ZU35 1233 aa5.85□□□□□ -1.47
RAP1B-201ENST00000250559 RUNDC1Q96C34 613 aa5.85□□□□□ -1.47
RAP1B-201ENST00000250559 EFCAB5A4FU69 1503 aa5.85□□□□□ -1.47
RAP1B-201ENST00000250559 RBM26Q5T8P6 1007 aaKnown RBP5.85□□□□□ -1.47
RAP1B-201ENST00000250559 ADAMTS8Q9UP79 889 aa5.85□□□□□ -1.47
RAP1B-201ENST00000250559 CABLES1Q8TDN4 633 aa5.85□□□□□ -1.47
RAP1B-201ENST00000250559 TOMM22Q9NS69 142 aa5.85□□□□□ -1.47
RAP1B-201ENST00000250559 PPP6R1Q9UPN7 881 aa5.85□□□□□ -1.47
RAP1B-201ENST00000250559 PRAM1Q96QH2 718 aa5.85□□□□□ -1.47
RAP1B-201ENST00000250559 ILDR1Q86SU0 546 aaPredicted RBP5.84□□□□□ -1.47
RAP1B-201ENST00000250559 RBM5P52756 815 aaKnown RBP eCLIP5.84□□□□□ -1.47
RAP1B-201ENST00000250559 C1orf141Q5JVX7 400 aa5.84□□□□□ -1.47
RAP1B-201ENST00000250559 EP400NLQ6ZTU2 488 aa5.84□□□□□ -1.47
RAP1B-201ENST00000250559 SKAP1Q86WV1 359 aa5.84□□□□□ -1.47
RAP1B-201ENST00000250559 SCAPERQ9BY12 1400 aa5.84□□□□□ -1.47
RAP1B-201ENST00000250559 C1orf115Q9H7X2 142 aa5.84□□□□□ -1.47
RAP1B-201ENST00000250559 ZNF622Q969S3 477 aaKnown RBP eCLIP5.84□□□□□ -1.48
RAP1B-201ENST00000250559 ZRANB1Q9UGI0 708 aa5.84□□□□□ -1.48
RAP1B-201ENST00000250559 AIMP1Q12904 312 aaKnown RBP5.84□□□□□ -1.48
RAP1B-201ENST00000250559 LNPKQ9C0E8 428 aa5.84□□□□□ -1.48
RAP1B-201ENST00000250559 WDR78Q5VTH9 848 aa5.83□□□□□ -1.48
RAP1B-201ENST00000250559 DZIP1LQ8IYY4 767 aaKnown RBP5.83□□□□□ -1.48
RAP1B-201ENST00000250559 IQGAP2Q13576 1575 aa5.83□□□□□ -1.48
RAP1B-201ENST00000250559 FOXO3O43524 673 aa5.83□□□□□ -1.48
RAP1B-201ENST00000250559 DDX17Q92841 729 aaKnown RBP5.83□□□□□ -1.48
RAP1B-201ENST00000250559 C9orf84Q5VXU9 1444 aa5.83□□□□□ -1.48
RAP1B-201ENST00000250559 TEFQ10587 303 aa5.83□□□□□ -1.48
RAP1B-201ENST00000250559 ZKSCAN2Q63HK3 967 aa5.83□□□□□ -1.48
RAP1B-201ENST00000250559 KCNA4P22459 653 aa5.83□□□□□ -1.48
RAP1B-201ENST00000250559 STK11IPQ8N1F8 1099 aa5.83□□□□□ -1.48
RAP1B-201ENST00000250559 ERBINQ96RT1 1412 aa5.83□□□□□ -1.48
RAP1B-201ENST00000250559 IFT140Q96RY7 1462 aa5.83□□□□□ -1.48
RAP1B-201ENST00000250559 GOLGA6L3A6NEY3 463 aa5.83□□□□□ -1.48
RAP1B-201ENST00000250559 HMMRO75330 724 aa5.82□□□□□ -1.48
RAP1B-201ENST00000250559 SLC12A5Q9H2X9 1139 aa5.82□□□□□ -1.48
RAP1B-201ENST00000250559 NLRP6P59044 892 aa5.82□□□□□ -1.48
RAP1B-201ENST00000250559 FKBP5Q13451 457 aaPredicted RBP5.82□□□□□ -1.48
RAP1B-201ENST00000250559 HFM1A2PYH4 1435 aa5.82□□□□□ -1.48
RAP1B-201ENST00000250559 CAMSAP2Q08AD1 1489 aa5.82□□□□□ -1.48
RAP1B-201ENST00000250559 EPRSP07814 1512 aaKnown RBP5.82□□□□□ -1.48
RAP1B-201ENST00000250559 TSR2Q969E8 191 aaKnown RBP5.82□□□□□ -1.48
RAP1B-201ENST00000250559 TRIM34Q9BYJ4 488 aa5.82□□□□□ -1.48
RAP1B-201ENST00000250559 BIN2Q9UBW5 565 aaPredicted RBP5.82□□□□□ -1.48
RAP1B-201ENST00000250559 KDM4AO75164 1064 aa5.82□□□□□ -1.48
RAP1B-201ENST00000250559 ZNF608Q9ULD9 1512 aaPredicted RBP5.82□□□□□ -1.48
RAP1B-201ENST00000250559 KIAA1107Q9UPP5 1409 aa5.82□□□□□ -1.48
RAP1B-201ENST00000250559 NUTM1Q86Y26 1132 aa5.82□□□□□ -1.48
RAP1B-201ENST00000250559 PPP2R1AP30153 589 aa5.82□□□□□ -1.48
RAP1B-201ENST00000250559 NBPF14Q5TI25 921 aa5.82□□□□□ -1.48
RAP1B-201ENST00000250559 MSL1Q68DK7 614 aa5.82□□□□□ -1.48
RAP1B-201ENST00000250559 PTPN23Q9H3S7 1636 aa5.82□□□□□ -1.48
RAP1B-201ENST00000250559 EXOSC9Q06265 439 aaKnown RBP5.82□□□□□ -1.48
RAP1B-201ENST00000250559 LMOD3Q0VAK6 560 aa5.82□□□□□ -1.48
RAP1B-201ENST00000250559 GOLGA6L6A8MZA4 724 aa5.81□□□□□ -1.48
RAP1B-201ENST00000250559 RRS1Q15050 365 aaKnown RBP5.81□□□□□ -1.48
RAP1B-201ENST00000250559 KIF14Q15058 1648 aa5.81□□□□□ -1.48
RAP1B-201ENST00000250559 TCP11L2Q8N4U5 519 aa5.81□□□□□ -1.48
RAP1B-201ENST00000250559 C9orf78Q9NZ63 289 aaPredicted RBP5.81□□□□□ -1.48
RAP1B-201ENST00000250559 URB2Q14146 1524 aaKnown RBP5.81□□□□□ -1.48
RAP1B-201ENST00000250559 DMRT2Q9Y5R5 561 aa5.81□□□□□ -1.48
RAP1B-201ENST00000250559 MAP4K4O95819 1239 aaPredicted RBP5.81□□□□□ -1.48
RAP1B-201ENST00000250559 TTC5Q8N0Z6 440 aa5.81□□□□□ -1.48
RAP1B-201ENST00000250559 PRKG1Q13976 671 aa5.81□□□□□ -1.48
RAP1B-201ENST00000250559 THEMISQ8N1K5 641 aaPredicted RBP5.81□□□□□ -1.48
RAP1B-201ENST00000250559 GBP4Q96PP9 640 aa5.81□□□□□ -1.48
RAP1B-201ENST00000250559 FOSBP53539 338 aa5.81□□□□□ -1.48
RAP1B-201ENST00000250559 FBXO31Q5XUX0 539 aaPredicted RBP5.81□□□□□ -1.48
RAP1B-201ENST00000250559 CREBRFQ8IUR6 639 aa5.81□□□□□ -1.48
RAP1B-201ENST00000250559 DDX19BQ9UMR2 479 aa5.81□□□□□ -1.48
RAP1B-201ENST00000250559 BEGAINQ9BUH8 593 aa5.81□□□□□ -1.48
RAP1B-201ENST00000250559 PRKAR2BP31323 418 aa5.81□□□□□ -1.48
RAP1B-201ENST00000250559 CCDC85AQ96PX6 553 aaPredicted RBP5.81□□□□□ -1.48
RAP1B-201ENST00000250559 TROQ12816 1431 aaPredicted RBP5.81□□□□□ -1.48
RAP1B-201ENST00000250559 ABTB2Q8N961 1025 aa5.8□□□□□ -1.48
RAP1B-201ENST00000250559 BIVM-ERCC5R4GMW8 1640 aa5.8□□□□□ -1.48
RAP1B-201ENST00000250559 L1TD1Q5T7N2 865 aaKnown RBP5.8□□□□□ -1.48
RAP1B-201ENST00000250559 PODXL2Q9NZ53 605 aa5.8□□□□□ -1.48
RAP1B-201ENST00000250559 TSPYL4Q9UJ04 414 aa5.8□□□□□ -1.48
RAP1B-201ENST00000250559 RAPGEF4Q8WZA2 1011 aa5.8□□□□□ -1.48
RAP1B-201ENST00000250559 CSPG5O95196 566 aa5.8□□□□□ -1.48
RAP1B-201ENST00000250559 ABCC5O15440 1437 aa5.8□□□□□ -1.48
RAP1B-201ENST00000250559 MIA2Q96PC5 1412 aa5.8□□□□□ -1.48
RAP1B-201ENST00000250559 DDX49Q9Y6V7 483 aaKnown RBP5.8□□□□□ -1.48
RAP1B-201ENST00000250559 GSE1Q14687 1217 aa5.8□□□□□ -1.48
RAP1B-201ENST00000250559 EAPPQ56P03 285 aaPredicted RBP5.8□□□□□ -1.48
RAP1B-201ENST00000250559 CDK19Q9BWU1 502 aa5.79□□□□□ -1.48
RAP1B-201ENST00000250559 BRD4O60885 1362 aaPredicted RBP5.79□□□□□ -1.48
RAP1B-201ENST00000250559 CA8P35219 290 aa5.79□□□□□ -1.48
RAP1B-201ENST00000250559 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.79□□□□□ -1.48
RAP1B-201ENST00000250559 NAIPQ13075 1403 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms