RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ZFYVE9O95405 1425 aa25.63■■□□□ 1.69
CDC42EP1-201ENST00000249014 EVC2Q86UK5 1308 aa25.63■■□□□ 1.69
CDC42EP1-201ENST00000249014 DMRT2Q9Y5R5 561 aa25.62■■□□□ 1.69
CDC42EP1-201ENST00000249014 NKTRP30414 1462 aaKnown RBP25.61■■□□□ 1.69
CDC42EP1-201ENST00000249014 PUS7Q96PZ0 661 aaKnown RBP25.61■■□□□ 1.69
CDC42EP1-201ENST00000249014 SENP3Q9H4L4 574 aaPredicted RBP25.6■■□□□ 1.69
CDC42EP1-201ENST00000249014 CGNL1Q0VF96 1302 aa25.59■■□□□ 1.69
CDC42EP1-201ENST00000249014 E9PSI1 815 aa25.58■■□□□ 1.69
CDC42EP1-201ENST00000249014 ANKRD36BQ8N2N9 1353 aa25.58■■□□□ 1.69
CDC42EP1-201ENST00000249014 SAFB2Q14151 953 aaKnown RBP eCLIP25.58■■□□□ 1.68
CDC42EP1-201ENST00000249014 NGEFQ8N5V2 710 aa25.58■■□□□ 1.68
CDC42EP1-201ENST00000249014 CABP2Q9NPB3 220 aa25.58■■□□□ 1.68
CDC42EP1-201ENST00000249014 SKAP1Q86WV1 359 aa25.56■■□□□ 1.68
CDC42EP1-201ENST00000249014 ANP32AP39687 249 aaKnown RBP25.55■■□□□ 1.68
CDC42EP1-201ENST00000249014 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.55■■□□□ 1.68
CDC42EP1-201ENST00000249014 STK26Q9P289 416 aa25.55■■□□□ 1.68
CDC42EP1-201ENST00000249014 KDM2BQ8NHM5 1336 aa25.55■■□□□ 1.68
CDC42EP1-201ENST00000249014 FBXO31Q5XUX0 539 aaPredicted RBP25.55■■□□□ 1.68
CDC42EP1-201ENST00000249014 NOP58Q9Y2X3 529 aaKnown RBP25.55■■□□□ 1.68
CDC42EP1-201ENST00000249014 MS4A1P11836 297 aa25.54■■□□□ 1.68
CDC42EP1-201ENST00000249014 PDE4AP27815 886 aa25.54■■□□□ 1.68
CDC42EP1-201ENST00000249014 MTHFSP49914 203 aa25.54■■□□□ 1.68
CDC42EP1-201ENST00000249014 WWC1Q8IX03 1113 aa25.54■■□□□ 1.68
CDC42EP1-201ENST00000249014 DIP2BQ9P265 1576 aa25.54■■□□□ 1.68
CDC42EP1-201ENST00000249014 PAK3O75914 559 aaPredicted RBP25.53■■□□□ 1.68
CDC42EP1-201ENST00000249014 FAM69CQ0P6D2 419 aa25.53■■□□□ 1.68
CDC42EP1-201ENST00000249014 TSPOAP1O95153 1857 aa25.53■■□□□ 1.68
CDC42EP1-201ENST00000249014 PTPRMP28827 1452 aa25.52■■□□□ 1.68
CDC42EP1-201ENST00000249014 BCAR3O75815 825 aa25.52■■□□□ 1.68
CDC42EP1-201ENST00000249014 IQSEC2Q5JU85 1478 aa25.52■■□□□ 1.68
CDC42EP1-201ENST00000249014 RIMBP3CA6NJZ7 1639 aa25.52■■□□□ 1.68
CDC42EP1-201ENST00000249014 RIMBP3BA6NNM3 1639 aa25.52■■□□□ 1.68
CDC42EP1-201ENST00000249014 RIMBP3Q9UFD9 1639 aa25.52■■□□□ 1.68
CDC42EP1-201ENST00000249014 IPO9Q96P70 1041 aaKnown RBP25.52■■□□□ 1.68
CDC42EP1-201ENST00000249014 BACH2Q9BYV9 841 aa25.51■■□□□ 1.67
CDC42EP1-201ENST00000249014 RUNDC1Q96C34 613 aa25.5■■□□□ 1.67
CDC42EP1-201ENST00000249014 NSD2O96028 1365 aa25.5■■□□□ 1.67
CDC42EP1-201ENST00000249014 A0A1W2PP64 1363 aa25.48■■□□□ 1.67
CDC42EP1-201ENST00000249014 RRP7AQ9Y3A4 280 aaKnown RBP25.48■■□□□ 1.67
CDC42EP1-201ENST00000249014 NEUROD2Q15784 382 aa25.48■■□□□ 1.67
CDC42EP1-201ENST00000249014 TCP11L2Q8N4U5 519 aa25.47■■□□□ 1.67
CDC42EP1-201ENST00000249014 YTHDC2Q9H6S0 1430 aaKnown RBP25.47■■□□□ 1.67
CDC42EP1-201ENST00000249014 SRPK2P78362 688 aaKnown RBP25.46■■□□□ 1.67
CDC42EP1-201ENST00000249014 ALKQ9UM73 1620 aa25.45■■□□□ 1.67
CDC42EP1-201ENST00000249014 CENPQQ7L2Z9 268 aaPredicted RBP25.45■■□□□ 1.67
CDC42EP1-201ENST00000249014 CFAP53Q96M91 514 aa25.45■■□□□ 1.67
CDC42EP1-201ENST00000249014 PRAM1Q96QH2 718 aa25.45■■□□□ 1.67
CDC42EP1-201ENST00000249014 ABCC11Q96J66 1382 aa25.45■■□□□ 1.66
CDC42EP1-201ENST00000249014 CLTCQ00610 1675 aaKnown RBP25.45■■□□□ 1.66
CDC42EP1-201ENST00000249014 PHF23Q9BUL5 403 aaPredicted RBP25.45■■□□□ 1.66
CDC42EP1-201ENST00000249014 NINLQ9Y2I6 1382 aa25.44■■□□□ 1.66
CDC42EP1-201ENST00000249014 MINK1Q8N4C8 1332 aaPredicted RBP25.44■■□□□ 1.66
CDC42EP1-201ENST00000249014 REREQ9P2R6 1566 aa25.44■■□□□ 1.66
CDC42EP1-201ENST00000249014 NPM2Q86SE8 214 aaKnown RBP25.41■■□□□ 1.66
CDC42EP1-201ENST00000249014 AGLP35573 1532 aa25.41■■□□□ 1.66
CDC42EP1-201ENST00000249014 CD163L1Q9NR16 1453 aa25.41■■□□□ 1.66
CDC42EP1-201ENST00000249014 POGKQ9P215 609 aa25.4■■□□□ 1.66
CDC42EP1-201ENST00000249014 ATAD2Q6PL18 1390 aa25.4■■□□□ 1.66
CDC42EP1-201ENST00000249014 ANKRD26Q9UPS8 1709 aa25.39■■□□□ 1.65
CDC42EP1-201ENST00000249014 GGNBP2Q9H3C7 697 aa25.38■■□□□ 1.65
CDC42EP1-201ENST00000249014 ZBTB47Q9UFB7 747 aaPredicted RBP25.38■■□□□ 1.65
CDC42EP1-201ENST00000249014 STAG3Q9UJ98 1225 aa25.38■■□□□ 1.65
CDC42EP1-201ENST00000249014 U2AF1L5P0DN76 240 aaPredicted RBP25.37■■□□□ 1.65
CDC42EP1-201ENST00000249014 U2AF1Q01081 240 aaKnown RBP eCLIP25.37■■□□□ 1.65
CDC42EP1-201ENST00000249014 CCDC27Q2M243 656 aa25.37■■□□□ 1.65
CDC42EP1-201ENST00000249014 WDR63Q8IWG1 891 aa25.37■■□□□ 1.65
CDC42EP1-201ENST00000249014 ADGRB2O60241 1585 aa25.36■■□□□ 1.65
CDC42EP1-201ENST00000249014 NLRP1Q9C000 1473 aa25.35■■□□□ 1.65
CDC42EP1-201ENST00000249014 ARHGEF40Q8TER5 1519 aa25.35■■□□□ 1.65
CDC42EP1-201ENST00000249014 PDE3AQ14432 1141 aa25.35■■□□□ 1.65
CDC42EP1-201ENST00000249014 A2ML1A8K2U0 1454 aa25.35■■□□□ 1.65
CDC42EP1-201ENST00000249014 SPATA31D1Q6ZQQ2 1576 aa25.35■■□□□ 1.65
CDC42EP1-201ENST00000249014 FYB1O15117 783 aa25.34■■□□□ 1.65
CDC42EP1-201ENST00000249014 TERF2IPQ9NYB0 399 aa25.34■■□□□ 1.65
CDC42EP1-201ENST00000249014 PPP6R1Q9UPN7 881 aa25.34■■□□□ 1.65
CDC42EP1-201ENST00000249014 COL3A1P02461 1466 aaPredicted RBP25.33■■□□□ 1.65
CDC42EP1-201ENST00000249014 SETD1AO15047 1707 aaKnown RBP25.33■■□□□ 1.64
CDC42EP1-201ENST00000249014 CDK19Q9BWU1 502 aa25.32■■□□□ 1.64
CDC42EP1-201ENST00000249014 RARSP54136 660 aaKnown RBP25.32■■□□□ 1.64
CDC42EP1-201ENST00000249014 MED14O60244 1454 aa25.32■■□□□ 1.64
CDC42EP1-201ENST00000249014 PANK1Q8TE04 598 aa25.31■■□□□ 1.64
CDC42EP1-201ENST00000249014 CANXP27824 592 aaKnown RBP25.29■■□□□ 1.64
CDC42EP1-201ENST00000249014 NCBP3Q53F19 620 aaKnown RBP25.29■■□□□ 1.64
CDC42EP1-201ENST00000249014 MLECQ14165 292 aa25.29■■□□□ 1.64
CDC42EP1-201ENST00000249014 COG6Q9Y2V7 657 aa25.29■■□□□ 1.64
CDC42EP1-201ENST00000249014 KIF20BQ96Q89 1820 aa25.29■■□□□ 1.64
CDC42EP1-201ENST00000249014 RIMS2Q9UQ26 1411 aa25.28■■□□□ 1.64
CDC42EP1-201ENST00000249014 IGHDP01880 384 aa25.28■■□□□ 1.64
CDC42EP1-201ENST00000249014 FRAT1Q92837 279 aaPredicted RBP25.28■■□□□ 1.64
CDC42EP1-201ENST00000249014 PLEKHF1Q96S99 279 aa25.28■■□□□ 1.64
CDC42EP1-201ENST00000249014 CABP1Q9NZU7 370 aa25.28■■□□□ 1.64
CDC42EP1-201ENST00000249014 DLC1Q96QB1 1528 aa25.27■■□□□ 1.64
CDC42EP1-201ENST00000249014 U2SURPO15042 1029 aaKnown RBP25.27■■□□□ 1.64
CDC42EP1-201ENST00000249014 HDGFL2Q7Z4V5 671 aaPredicted RBP25.26■■□□□ 1.63
CDC42EP1-201ENST00000249014 WAPLQ7Z5K2 1190 aa25.26■■□□□ 1.63
CDC42EP1-201ENST00000249014 NBR1Q14596 966 aa25.25■■□□□ 1.63
CDC42EP1-201ENST00000249014 CLUAP1Q96AJ1 413 aa25.25■■□□□ 1.63
CDC42EP1-201ENST00000249014 RGS3P49796 1198 aa25.24■■□□□ 1.63
CDC42EP1-201ENST00000249014 C8orf34Q49A92 452 aa25.24■■□□□ 1.63
CDC42EP1-201ENST00000249014 BCL2L13Q9BXK5 485 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms