RNA–Protein interactions for RNA: ENST00000245923.8

RTN2-201, Transcript of reticulon 2, humanhuman

TSL 1 (best) BASIC

Gene RTN2, Length 2,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-201ENST00000245923 C20orf194Q5TEA3 1177 aa34.51■■■■□ 3.11
RTN2-201ENST00000245923 NKTRP30414 1462 aaKnown RBP34.5■■■■□ 3.11
RTN2-201ENST00000245923 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.47■■■■□ 3.11
RTN2-201ENST00000245923 CGNL1Q0VF96 1302 aa34.47■■■■□ 3.11
RTN2-201ENST00000245923 ANKRD36BQ8N2N9 1353 aa34.47■■■■□ 3.11
RTN2-201ENST00000245923 E9PSI1 815 aa34.47■■■■□ 3.11
RTN2-201ENST00000245923 MS4A1P11836 297 aa34.47■■■■□ 3.11
RTN2-201ENST00000245923 SPINK5Q9NQ38 1064 aaPredicted RBP34.46■■■■□ 3.11
RTN2-201ENST00000245923 NSD2O96028 1365 aa34.43■■■■□ 3.1
RTN2-201ENST00000245923 CYB5RLQ6IPT4 315 aa34.42■■■■□ 3.1
RTN2-201ENST00000245923 DIP2BQ9P265 1576 aa34.41■■■■□ 3.1
RTN2-201ENST00000245923 ANP32AP39687 249 aaKnown RBP34.41■■■■□ 3.1
RTN2-201ENST00000245923 REREQ9P2R6 1566 aa34.39■■■■□ 3.1
RTN2-201ENST00000245923 NINLQ9Y2I6 1382 aa34.38■■■■□ 3.09
RTN2-201ENST00000245923 KDM2BQ8NHM5 1336 aa34.37■■■■□ 3.09
RTN2-201ENST00000245923 PTPRMP28827 1452 aa34.37■■■■□ 3.09
RTN2-201ENST00000245923 NOP58Q9Y2X3 529 aaKnown RBP34.37■■■■□ 3.09
RTN2-201ENST00000245923 IQSEC2Q5JU85 1478 aa34.36■■■■□ 3.09
RTN2-201ENST00000245923 TNNT2P45379 298 aaPredicted RBP34.36■■■■□ 3.09
RTN2-201ENST00000245923 RIMBP3CA6NJZ7 1639 aa34.36■■■■□ 3.09
RTN2-201ENST00000245923 RIMBP3BA6NNM3 1639 aa34.36■■■■□ 3.09
RTN2-201ENST00000245923 RIMBP3Q9UFD9 1639 aa34.36■■■■□ 3.09
RTN2-201ENST00000245923 DMRT2Q9Y5R5 561 aa34.35■■■■□ 3.09
RTN2-201ENST00000245923 WWC1Q8IX03 1113 aa34.35■■■■□ 3.09
RTN2-201ENST00000245923 RUNDC1Q96C34 613 aa34.35■■■■□ 3.09
RTN2-201ENST00000245923 PDE4AP27815 886 aa34.34■■■■□ 3.09
RTN2-201ENST00000245923 CABP2Q9NPB3 220 aa34.34■■■■□ 3.09
RTN2-201ENST00000245923 IPO9Q96P70 1041 aaKnown RBP34.34■■■■□ 3.09
RTN2-201ENST00000245923 CLTCQ00610 1675 aaKnown RBP34.34■■■■□ 3.09
RTN2-201ENST00000245923 MTHFSP49914 203 aa34.33■■■■□ 3.09
RTN2-201ENST00000245923 AGLP35573 1532 aa34.33■■■■□ 3.09
RTN2-201ENST00000245923 BACH2Q9BYV9 841 aa34.33■■■■□ 3.09
RTN2-201ENST00000245923 FAM69CQ0P6D2 419 aa34.32■■■■□ 3.08
RTN2-201ENST00000245923 CFAP53Q96M91 514 aa34.32■■■■□ 3.08
RTN2-201ENST00000245923 CENPQQ7L2Z9 268 aaPredicted RBP34.3■■■■□ 3.08
RTN2-201ENST00000245923 YTHDC2Q9H6S0 1430 aaKnown RBP34.3■■■■□ 3.08
RTN2-201ENST00000245923 STK26Q9P289 416 aa34.29■■■■□ 3.08
RTN2-201ENST00000245923 ABCC11Q96J66 1382 aa34.29■■■■□ 3.08
RTN2-201ENST00000245923 FBXO31Q5XUX0 539 aaPredicted RBP34.29■■■■□ 3.08
RTN2-201ENST00000245923 PHF23Q9BUL5 403 aaPredicted RBP34.29■■■■□ 3.08
RTN2-201ENST00000245923 TSPOAP1O95153 1857 aa34.28■■■■□ 3.08
RTN2-201ENST00000245923 ALKQ9UM73 1620 aa34.28■■■■□ 3.08
RTN2-201ENST00000245923 PPP6R1Q9UPN7 881 aa34.28■■■■□ 3.08
RTN2-201ENST00000245923 SAFB2Q14151 953 aaKnown RBP eCLIP34.27■■■■□ 3.08
RTN2-201ENST00000245923 A0A1W2PP64 1363 aa34.27■■■■□ 3.08
RTN2-201ENST00000245923 ATAD2Q6PL18 1390 aa34.26■■■■□ 3.07
RTN2-201ENST00000245923 BCAR3O75815 825 aa34.25■■■■□ 3.07
RTN2-201ENST00000245923 NCBP3Q53F19 620 aaKnown RBP34.24■■■■□ 3.07
RTN2-201ENST00000245923 TCP11L2Q8N4U5 519 aa34.24■■■■□ 3.07
RTN2-201ENST00000245923 ANKRD26Q9UPS8 1709 aa34.24■■■■□ 3.07
RTN2-201ENST00000245923 PAK3O75914 559 aaPredicted RBP34.23■■■■□ 3.07
RTN2-201ENST00000245923 SRPK2P78362 688 aaKnown RBP34.23■■■■□ 3.07
RTN2-201ENST00000245923 CCDC27Q2M243 656 aa34.21■■■■□ 3.07
RTN2-201ENST00000245923 PRAM1Q96QH2 718 aa34.21■■■■□ 3.07
RTN2-201ENST00000245923 WDR63Q8IWG1 891 aa34.2■■■■□ 3.07
RTN2-201ENST00000245923 MED14O60244 1454 aa34.19■■■■□ 3.06
RTN2-201ENST00000245923 SPATA31D1Q6ZQQ2 1576 aa34.19■■■■□ 3.06
RTN2-201ENST00000245923 CD163L1Q9NR16 1453 aa34.18■■■■□ 3.06
RTN2-201ENST00000245923 ADGRB2O60241 1585 aa34.18■■■■□ 3.06
RTN2-201ENST00000245923 PDE3AQ14432 1141 aa34.18■■■■□ 3.06
RTN2-201ENST00000245923 POGKQ9P215 609 aa34.17■■■■□ 3.06
RTN2-201ENST00000245923 SKAP1Q86WV1 359 aa34.16■■■■□ 3.06
RTN2-201ENST00000245923 RRP7AQ9Y3A4 280 aaKnown RBP34.16■■■■□ 3.06
RTN2-201ENST00000245923 MINK1Q8N4C8 1332 aaPredicted RBP34.16■■■■□ 3.06
RTN2-201ENST00000245923 TERF2IPQ9NYB0 399 aa34.15■■■■□ 3.06
RTN2-201ENST00000245923 ZBTB47Q9UFB7 747 aaPredicted RBP34.15■■■■□ 3.06
RTN2-201ENST00000245923 NEUROD2Q15784 382 aa34.15■■■■□ 3.06
RTN2-201ENST00000245923 SENP3Q9H4L4 574 aaPredicted RBP34.15■■■■□ 3.06
RTN2-201ENST00000245923 ARHGEF40Q8TER5 1519 aa34.14■■■■□ 3.06
RTN2-201ENST00000245923 A2ML1A8K2U0 1454 aa34.14■■■■□ 3.06
RTN2-201ENST00000245923 STAG3Q9UJ98 1225 aa34.13■■■■□ 3.05
RTN2-201ENST00000245923 NLRP1Q9C000 1473 aa34.13■■■■□ 3.05
RTN2-201ENST00000245923 DLC1Q96QB1 1528 aa34.13■■■■□ 3.05
RTN2-201ENST00000245923 COL3A1P02461 1466 aaPredicted RBP34.11■■■■□ 3.05
RTN2-201ENST00000245923 SETD1AO15047 1707 aaKnown RBP34.11■■■■□ 3.05
RTN2-201ENST00000245923 U2AF1L5P0DN76 240 aaPredicted RBP34.1■■■■□ 3.05
RTN2-201ENST00000245923 U2AF1Q01081 240 aaKnown RBP eCLIP34.1■■■■□ 3.05
RTN2-201ENST00000245923 FYB1O15117 783 aa34.08■■■■□ 3.05
RTN2-201ENST00000245923 GGNBP2Q9H3C7 697 aa34.08■■■■□ 3.05
RTN2-201ENST00000245923 NPM2Q86SE8 214 aaKnown RBP34.07■■■■□ 3.04
RTN2-201ENST00000245923 KIF20BQ96Q89 1820 aa34.07■■■■□ 3.04
RTN2-201ENST00000245923 RARSP54136 660 aaKnown RBP34.06■■■■□ 3.04
RTN2-201ENST00000245923 CDK19Q9BWU1 502 aa34.06■■■■□ 3.04
RTN2-201ENST00000245923 RIMS2Q9UQ26 1411 aa34.05■■■■□ 3.04
RTN2-201ENST00000245923 HDGFL2Q7Z4V5 671 aaPredicted RBP34.04■■■■□ 3.04
RTN2-201ENST00000245923 CANXP27824 592 aaKnown RBP34.01■■■■□ 3.04
RTN2-201ENST00000245923 MYH16Q9H6N6 1097 aa34.01■■■■□ 3.04
RTN2-201ENST00000245923 PLEKHF1Q96S99 279 aa34■■■■□ 3.03
RTN2-201ENST00000245923 PANK1Q8TE04 598 aa33.98■■■■□ 3.03
RTN2-201ENST00000245923 CLUAP1Q96AJ1 413 aa33.97■■■■□ 3.03
RTN2-201ENST00000245923 CABP1Q9NZU7 370 aa33.97■■■■□ 3.03
RTN2-201ENST00000245923 PNPLA6Q8IY17 1366 aa33.97■■■■□ 3.03
RTN2-201ENST00000245923 ATP7BP35670 1465 aa33.96■■■■□ 3.03
RTN2-201ENST00000245923 NRXN3Q9Y4C0 1643 aa33.96■■■■□ 3.03
RTN2-201ENST00000245923 AAMPQ13685 434 aa33.96■■■■□ 3.03
RTN2-201ENST00000245923 COG6Q9Y2V7 657 aa33.96■■■■□ 3.03
RTN2-201ENST00000245923 FAM161AQ3B820 660 aa33.95■■■■□ 3.03
RTN2-201ENST00000245923 KIF13AQ9H1H9 1805 aa33.93■■■■□ 3.02
RTN2-201ENST00000245923 U2SURPO15042 1029 aaKnown RBP33.93■■■■□ 3.02
RTN2-201ENST00000245923 IGHDP01880 384 aa33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms