RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 PHLPP1O60346 1717 aa15.35■□□□□ 0.05
PFDN5-201ENST00000243040 NEUROD1Q13562 356 aa15.35■□□□□ 0.05
PFDN5-201ENST00000243040 SLAIN2Q9P270 581 aa15.35■□□□□ 0.05
PFDN5-201ENST00000243040 STK26Q9P289 416 aa15.35■□□□□ 0.05
PFDN5-201ENST00000243040 CLSPNQ9HAW4 1339 aa15.34■□□□□ 0.05
PFDN5-201ENST00000243040 COL16A1Q07092 1604 aaPredicted RBP15.33■□□□□ 0.04
PFDN5-201ENST00000243040 HSPA1LP34931 641 aa15.33■□□□□ 0.04
PFDN5-201ENST00000243040 WAPLQ7Z5K2 1190 aa15.32■□□□□ 0.04
PFDN5-201ENST00000243040 TONSLQ96HA7 1378 aa15.32■□□□□ 0.04
PFDN5-201ENST00000243040 C1orf167Q5SNV9 1468 aa15.32■□□□□ 0.04
PFDN5-201ENST00000243040 RGPD8O14715 1765 aaPredicted RBP15.29■□□□□ 0.04
PFDN5-201ENST00000243040 KIF1AQ12756 1690 aa15.29■□□□□ 0.04
PFDN5-201ENST00000243040 PRAM1Q96QH2 718 aa15.29■□□□□ 0.04
PFDN5-201ENST00000243040 TRAK1Q9UPV9 953 aa15.29■□□□□ 0.04
PFDN5-201ENST00000243040 QRICH2Q9H0J4 1663 aa15.28■□□□□ 0.04
PFDN5-201ENST00000243040 RALGAPBQ86X10 1494 aa15.28■□□□□ 0.04
PFDN5-201ENST00000243040 BRINP3Q76B58 766 aa15.28■□□□□ 0.04
PFDN5-201ENST00000243040 USP32Q8NFA0 1604 aa15.28■□□□□ 0.04
PFDN5-201ENST00000243040 GPRASP1Q5JY77 1395 aa15.27■□□□□ 0.04
PFDN5-201ENST00000243040 NBPF1Q3BBV0 1214 aa15.27■□□□□ 0.04
PFDN5-201ENST00000243040 SHPRHQ149N8 1683 aa15.27■□□□□ 0.03
PFDN5-201ENST00000243040 POGKQ9P215 609 aa15.26■□□□□ 0.03
PFDN5-201ENST00000243040 ITSN1Q15811 1721 aa15.26■□□□□ 0.03
PFDN5-201ENST00000243040 TULP4Q9NRJ4 1543 aa15.25■□□□□ 0.03
PFDN5-201ENST00000243040 ANKARQ7Z5J8 1434 aa15.25■□□□□ 0.03
PFDN5-201ENST00000243040 ROCK2O75116 1388 aaKnown RBP15.24■□□□□ 0.03
PFDN5-201ENST00000243040 MED1Q15648 1581 aaPredicted RBP15.24■□□□□ 0.03
PFDN5-201ENST00000243040 NBPF8Q3BBV2 869 aa15.24■□□□□ 0.03
PFDN5-201ENST00000243040 EIF3AQ14152 1382 aaKnown RBP15.24■□□□□ 0.03
PFDN5-201ENST00000243040 TOPAZ1Q8N9V7 1692 aa15.23■□□□□ 0.03
PFDN5-201ENST00000243040 SAFB2Q14151 953 aaKnown RBP eCLIP15.23■□□□□ 0.03
PFDN5-201ENST00000243040 TIMELESSQ9UNS1 1208 aa15.21■□□□□ 0.03
PFDN5-201ENST00000243040 JCADQ9P266 1359 aa15.21■□□□□ 0.02
PFDN5-201ENST00000243040 ORAI2Q96SN7 254 aa15.2■□□□□ 0.02
PFDN5-201ENST00000243040 ATP7BP35670 1465 aa15.2■□□□□ 0.02
PFDN5-201ENST00000243040 PXDNQ92626 1479 aa15.2■□□□□ 0.02
PFDN5-201ENST00000243040 MINK1Q8N4C8 1332 aaPredicted RBP15.19■□□□□ 0.02
PFDN5-201ENST00000243040 CENPJQ9HC77 1338 aaPredicted RBP15.19■□□□□ 0.02
PFDN5-201ENST00000243040 COL22A1Q8NFW1 1626 aaPredicted RBP15.18■□□□□ 0.02
PFDN5-201ENST00000243040 WASLO00401 505 aaPredicted RBP15.18■□□□□ 0.02
PFDN5-201ENST00000243040 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
PFDN5-201ENST00000243040 ESCO1Q5FWF5 840 aa15.17■□□□□ 0.02
PFDN5-201ENST00000243040 CCER1Q8TC90 406 aaPredicted RBP15.17■□□□□ 0.02
PFDN5-201ENST00000243040 HIRIP3Q9BW71 556 aaPredicted RBP15.17■□□□□ 0.02
PFDN5-201ENST00000243040 NPHP3Q7Z494 1330 aa15.17■□□□□ 0.02
PFDN5-201ENST00000243040 SBNO2Q9Y2G9 1366 aa15.16■□□□□ 0.02
PFDN5-201ENST00000243040 NUTM2FA1L443 756 aa15.16■□□□□ 0.02
PFDN5-201ENST00000243040 TRPM3Q9HCF6 1732 aaPredicted RBP15.15■□□□□ 0.02
PFDN5-201ENST00000243040 PRR36Q9H6K5 1346 aa15.15■□□□□ 0.02
PFDN5-201ENST00000243040 DDX17Q92841 729 aaKnown RBP15.14■□□□□ 0.01
PFDN5-201ENST00000243040 CARD11Q9BXL7 1154 aa15.14■□□□□ 0.01
PFDN5-201ENST00000243040 PNPLA6Q8IY17 1366 aa15.13■□□□□ 0.01
PFDN5-201ENST00000243040 LRRC59Q96AG4 307 aaKnown RBP15.13■□□□□ 0.01
PFDN5-201ENST00000243040 PHF8Q9UPP1 1060 aa15.13■□□□□ 0.01
PFDN5-201ENST00000243040 SPATA31A6Q5VVP1 1343 aa15.13■□□□□ 0.01
PFDN5-201ENST00000243040 LRP6O75581 1613 aa15.12■□□□□ 0.01
PFDN5-201ENST00000243040 ALS2Q96Q42 1657 aa15.12■□□□□ 0.01
PFDN5-201ENST00000243040 FOXO3O43524 673 aa15.11■□□□□ 0.01
PFDN5-201ENST00000243040 CDK19Q9BWU1 502 aa15.11■□□□□ 0.01
PFDN5-201ENST00000243040 ABCA3Q99758 1704 aa15.11■□□□□ 0.01
PFDN5-201ENST00000243040 MARF1Q9Y4F3 1742 aaKnown RBP15.1■□□□□ 0.01
PFDN5-201ENST00000243040 NUDT16Q96DE0 195 aaKnown RBP15.09■□□□□ 0.01
PFDN5-201ENST00000243040 SBNO1A3KN83 1393 aa15.09■□□□□ 0.01
PFDN5-201ENST00000243040 DISP3Q9P2K9 1392 aa15.09■□□□□ 0.01
PFDN5-201ENST00000243040 TNS3Q68CZ2 1445 aa15.09■□□□□ 0.01
PFDN5-201ENST00000243040 EVC2Q86UK5 1308 aa15.08■□□□□ 0
PFDN5-201ENST00000243040 POLR3AO14802 1390 aaPredicted RBP15.08■□□□□ 0
PFDN5-201ENST00000243040 AKAP12Q02952 1782 aa15.08■□□□□ 0
PFDN5-201ENST00000243040 CRYBG1Q9Y4K1 1723 aa15.07■□□□□ 0
PFDN5-201ENST00000243040 KRT28Q7Z3Y7 464 aa15.06■□□□□ 0
PFDN5-201ENST00000243040 PMFBP1Q8TBY8 1022 aa15.06■□□□□ 0
PFDN5-201ENST00000243040 CCDC61Q9Y6R9 512 aa15.06■□□□□ 0
PFDN5-201ENST00000243040 SPATA31A3Q5VYP0 1347 aa15.06■□□□□ 0
PFDN5-201ENST00000243040 PPIP5K1Q6PFW1 1433 aa15.06■□□□□ 0
PFDN5-201ENST00000243040 PLEKHG3A1L390 1219 aa15.05■□□□□ -0
PFDN5-201ENST00000243040 SRPK2P78362 688 aaKnown RBP15.05■□□□□ -0
PFDN5-201ENST00000243040 XPCQ01831 940 aaPredicted RBP15.05■□□□□ -0
PFDN5-201ENST00000243040 PSME1Q06323 249 aa15.05■□□□□ -0
PFDN5-201ENST00000243040 USP47Q96K76 1375 aa15.05■□□□□ -0
PFDN5-201ENST00000243040 ATAD2Q6PL18 1390 aa15.04■□□□□ -0
PFDN5-201ENST00000243040 MON2Q7Z3U7 1717 aa15.03■□□□□ -0
PFDN5-201ENST00000243040 NRKQ7Z2Y5 1582 aa15.03■□□□□ -0
PFDN5-201ENST00000243040 ARHGEF10O15013 1369 aa15.03■□□□□ -0
PFDN5-201ENST00000243040 CABP2Q9NPB3 220 aa15.03■□□□□ -0
PFDN5-201ENST00000243040 ACEP12821 1306 aa15.02■□□□□ -0
PFDN5-201ENST00000243040 NGDNQ8NEJ9 315 aaKnown RBP15.02■□□□□ -0
PFDN5-201ENST00000243040 TESK2Q96S53 571 aa15.02■□□□□ -0
PFDN5-201ENST00000243040 PHRF1Q9P1Y6 1649 aaKnown RBP15.02□□□□□ -0.01
PFDN5-201ENST00000243040 BRD4O60885 1362 aaPredicted RBP15.01□□□□□ -0.01
PFDN5-201ENST00000243040 ST20-MTHFSA0A0A6YYL1 179 aa15.01□□□□□ -0.01
PFDN5-201ENST00000243040 PHF23Q9BUL5 403 aaPredicted RBP15.01□□□□□ -0.01
PFDN5-201ENST00000243040 SLC24A1O60721 1099 aa15□□□□□ -0.01
PFDN5-201ENST00000243040 PUS7Q96PZ0 661 aaKnown RBP15□□□□□ -0.01
PFDN5-201ENST00000243040 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.99□□□□□ -0.01
PFDN5-201ENST00000243040 USP6P35125 1406 aa14.99□□□□□ -0.01
PFDN5-201ENST00000243040 NUTM2BA6NNL0 878 aaPredicted RBP14.98□□□□□ -0.01
PFDN5-201ENST00000243040 NUTM2EB1AL46 878 aaPredicted RBP14.98□□□□□ -0.01
PFDN5-201ENST00000243040 NUTM2AQ8IVF1 878 aaPredicted RBP14.98□□□□□ -0.01
PFDN5-201ENST00000243040 RGS17Q9UGC6 210 aaPredicted RBP14.98□□□□□ -0.01
PFDN5-201ENST00000243040 PIK3C2AO00443 1686 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms