RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 MORC1Q86VD1 984 aa21.3■■□□□ 1
UBE3D-201ENST00000237186 TULP4Q9NRJ4 1543 aa21.3■■□□□ 1
UBE3D-201ENST00000237186 ANKRD36BQ8N2N9 1353 aa21.3■■□□□ 1
UBE3D-201ENST00000237186 ARHGEF28Q8N1W1 1705 aaKnown RBP21.3■■□□□ 1
UBE3D-201ENST00000237186 NSD2O96028 1365 aa21.29■■□□□ 1
UBE3D-201ENST00000237186 NINLQ9Y2I6 1382 aa21.29■■□□□ 1
UBE3D-201ENST00000237186 CGNL1Q0VF96 1302 aa21.29■■□□□ 1
UBE3D-201ENST00000237186 APAF1O14727 1248 aa21.28■■□□□ 1
UBE3D-201ENST00000237186 FBXO31Q5XUX0 539 aaPredicted RBP21.27■■□□□ 1
UBE3D-201ENST00000237186 CCDC146Q8IYE0 955 aa21.26■□□□□ 0.99
UBE3D-201ENST00000237186 MLECQ14165 292 aa21.25■□□□□ 0.99
UBE3D-201ENST00000237186 E9PSI1 815 aa21.24■□□□□ 0.99
UBE3D-201ENST00000237186 MSH5O43196 834 aa21.24■□□□□ 0.99
UBE3D-201ENST00000237186 PLIN1O60240 522 aa21.24■□□□□ 0.99
UBE3D-201ENST00000237186 PTPRMP28827 1452 aa21.23■□□□□ 0.99
UBE3D-201ENST00000237186 NCBP3Q53F19 620 aaKnown RBP21.22■□□□□ 0.99
UBE3D-201ENST00000237186 YTHDC2Q9H6S0 1430 aaKnown RBP21.22■□□□□ 0.99
UBE3D-201ENST00000237186 CLTCQ00610 1675 aaKnown RBP21.22■□□□□ 0.99
UBE3D-201ENST00000237186 CRBNQ96SW2 442 aa21.22■□□□□ 0.99
UBE3D-201ENST00000237186 CABP2Q9NPB3 220 aa21.21■□□□□ 0.99
UBE3D-201ENST00000237186 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.2■□□□□ 0.98
UBE3D-201ENST00000237186 ATAD2Q6PL18 1390 aa21.2■□□□□ 0.98
UBE3D-201ENST00000237186 NKTRP30414 1462 aaKnown RBP21.2■□□□□ 0.98
UBE3D-201ENST00000237186 TCERG1O14776 1098 aaKnown RBP21.2■□□□□ 0.98
UBE3D-201ENST00000237186 TRHP20396 242 aaPredicted RBP21.2■□□□□ 0.98
UBE3D-201ENST00000237186 AEBP2Q6ZN18 517 aaPredicted RBP21.2■□□□□ 0.98
UBE3D-201ENST00000237186 SPINK5Q9NQ38 1064 aaPredicted RBP21.2■□□□□ 0.98
UBE3D-201ENST00000237186 ABCC11Q96J66 1382 aa21.19■□□□□ 0.98
UBE3D-201ENST00000237186 SPATA31D1Q6ZQQ2 1576 aa21.18■□□□□ 0.98
UBE3D-201ENST00000237186 MTHFSP49914 203 aa21.18■□□□□ 0.98
UBE3D-201ENST00000237186 RUNDC1Q96C34 613 aa21.18■□□□□ 0.98
UBE3D-201ENST00000237186 STK26Q9P289 416 aa21.18■□□□□ 0.98
UBE3D-201ENST00000237186 CFAP53Q96M91 514 aa21.18■□□□□ 0.98
UBE3D-201ENST00000237186 PHF23Q9BUL5 403 aaPredicted RBP21.18■□□□□ 0.98
UBE3D-201ENST00000237186 WWC1Q8IX03 1113 aa21.17■□□□□ 0.98
UBE3D-201ENST00000237186 ALKQ9UM73 1620 aa21.17■□□□□ 0.98
UBE3D-201ENST00000237186 C20orf194Q5TEA3 1177 aa21.16■□□□□ 0.98
UBE3D-201ENST00000237186 PRAM1Q96QH2 718 aa21.16■□□□□ 0.98
UBE3D-201ENST00000237186 A2ML1A8K2U0 1454 aa21.16■□□□□ 0.98
UBE3D-201ENST00000237186 SHPRHQ149N8 1683 aa21.16■□□□□ 0.98
UBE3D-201ENST00000237186 MYO5BQ9ULV0 1848 aa21.16■□□□□ 0.98
UBE3D-201ENST00000237186 A0A1W2PP64 1363 aa21.15■□□□□ 0.98
UBE3D-201ENST00000237186 ESF1Q9H501 851 aaKnown RBP21.15■□□□□ 0.98
UBE3D-201ENST00000237186 MS4A1P11836 297 aa21.15■□□□□ 0.98
UBE3D-201ENST00000237186 SRPK2P78362 688 aaKnown RBP21.15■□□□□ 0.98
UBE3D-201ENST00000237186 STAG3Q9UJ98 1225 aa21.15■□□□□ 0.98
UBE3D-201ENST00000237186 TNNT2P45379 298 aaPredicted RBP21.14■□□□□ 0.97
UBE3D-201ENST00000237186 SAFB2Q14151 953 aaKnown RBP eCLIP21.14■□□□□ 0.97
UBE3D-201ENST00000237186 CCDC27Q2M243 656 aa21.14■□□□□ 0.97
UBE3D-201ENST00000237186 POGKQ9P215 609 aa21.14■□□□□ 0.97
UBE3D-201ENST00000237186 MED14O60244 1454 aa21.14■□□□□ 0.97
UBE3D-201ENST00000237186 TERF2IPQ9NYB0 399 aa21.13■□□□□ 0.97
UBE3D-201ENST00000237186 IQSEC2Q5JU85 1478 aa21.13■□□□□ 0.97
UBE3D-201ENST00000237186 DMRT2Q9Y5R5 561 aa21.12■□□□□ 0.97
UBE3D-201ENST00000237186 DLC1Q96QB1 1528 aa21.12■□□□□ 0.97
UBE3D-201ENST00000237186 WDR63Q8IWG1 891 aa21.11■□□□□ 0.97
UBE3D-201ENST00000237186 ZMYM3Q14202 1370 aa21.1■□□□□ 0.97
UBE3D-201ENST00000237186 MINK1Q8N4C8 1332 aaPredicted RBP21.1■□□□□ 0.97
UBE3D-201ENST00000237186 KDM2BQ8NHM5 1336 aa21.1■□□□□ 0.97
UBE3D-201ENST00000237186 CD163L1Q9NR16 1453 aa21.1■□□□□ 0.97
UBE3D-201ENST00000237186 TCP11L2Q8N4U5 519 aa21.1■□□□□ 0.97
UBE3D-201ENST00000237186 RIMS2Q9UQ26 1411 aa21.1■□□□□ 0.97
UBE3D-201ENST00000237186 CDK19Q9BWU1 502 aa21.08■□□□□ 0.97
UBE3D-201ENST00000237186 FYB1O15117 783 aa21.07■□□□□ 0.96
UBE3D-201ENST00000237186 NLRP1Q9C000 1473 aa21.07■□□□□ 0.96
UBE3D-201ENST00000237186 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.07■□□□□ 0.96
UBE3D-201ENST00000237186 CENPQQ7L2Z9 268 aaPredicted RBP21.06■□□□□ 0.96
UBE3D-201ENST00000237186 PDE3AQ14432 1141 aa21.05■□□□□ 0.96
UBE3D-201ENST00000237186 HDGFL2Q7Z4V5 671 aaPredicted RBP21.05■□□□□ 0.96
UBE3D-201ENST00000237186 BCAR3O75815 825 aa21.04■□□□□ 0.96
UBE3D-201ENST00000237186 DNAJC5Q9H3Z4 198 aa21.04■□□□□ 0.96
UBE3D-201ENST00000237186 GGNBP2Q9H3C7 697 aa21.03■□□□□ 0.96
UBE3D-201ENST00000237186 PDE4AP27815 886 aa21.03■□□□□ 0.96
UBE3D-201ENST00000237186 BACH2Q9BYV9 841 aa21.03■□□□□ 0.96
UBE3D-201ENST00000237186 COL3A1P02461 1466 aaPredicted RBP21.02■□□□□ 0.96
UBE3D-201ENST00000237186 U2AF1L5P0DN76 240 aaPredicted RBP21.02■□□□□ 0.96
UBE3D-201ENST00000237186 U2AF1Q01081 240 aaKnown RBP eCLIP21.02■□□□□ 0.96
UBE3D-201ENST00000237186 SIRT1Q96EB6 747 aa21.02■□□□□ 0.96
UBE3D-201ENST00000237186 SENP3Q9H4L4 574 aaPredicted RBP21.02■□□□□ 0.96
UBE3D-201ENST00000237186 CABP1Q9NZU7 370 aa21.02■□□□□ 0.96
UBE3D-201ENST00000237186 PNPLA6Q8IY17 1366 aa21.02■□□□□ 0.95
UBE3D-201ENST00000237186 ANP32AP39687 249 aaKnown RBP21.01■□□□□ 0.95
UBE3D-201ENST00000237186 RRP7AQ9Y3A4 280 aaKnown RBP21.01■□□□□ 0.95
UBE3D-201ENST00000237186 SETD1AO15047 1707 aaKnown RBP21■□□□□ 0.95
UBE3D-201ENST00000237186 HDGFP51858 240 aaKnown RBP21■□□□□ 0.95
UBE3D-201ENST00000237186 ADGRB2O60241 1585 aa21■□□□□ 0.95
UBE3D-201ENST00000237186 NEUROD2Q15784 382 aa20.99■□□□□ 0.95
UBE3D-201ENST00000237186 PLEKHF1Q96S99 279 aa20.99■□□□□ 0.95
UBE3D-201ENST00000237186 ATP7BP35670 1465 aa20.99■□□□□ 0.95
UBE3D-201ENST00000237186 ERICH6Q7L0X2 663 aa20.98■□□□□ 0.95
UBE3D-201ENST00000237186 WAPLQ7Z5K2 1190 aa20.98■□□□□ 0.95
UBE3D-201ENST00000237186 TNRQ92752 1358 aa20.98■□□□□ 0.95
UBE3D-201ENST00000237186 IPO9Q96P70 1041 aaKnown RBP20.98■□□□□ 0.95
UBE3D-201ENST00000237186 RARSP54136 660 aaKnown RBP20.97■□□□□ 0.95
UBE3D-201ENST00000237186 MYH16Q9H6N6 1097 aa20.97■□□□□ 0.95
UBE3D-201ENST00000237186 ANKRD26Q9UPS8 1709 aa20.96■□□□□ 0.95
UBE3D-201ENST00000237186 NOP58Q9Y2X3 529 aaKnown RBP20.96■□□□□ 0.95
UBE3D-201ENST00000237186 TECPR2O15040 1411 aa20.95■□□□□ 0.94
UBE3D-201ENST00000237186 FAM135BQ49AJ0 1406 aa20.95■□□□□ 0.94
UBE3D-201ENST00000237186 NRXN3Q9Y4C0 1643 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms