RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 CABP2Q9NPB3 220 aa25.56■■□□□ 1.68
SNX17-201ENST00000233575 FAM135BQ49AJ0 1406 aa25.55■■□□□ 1.68
SNX17-201ENST00000233575 NCKAP5LQ9HCH0 1330 aa25.55■■□□□ 1.68
SNX17-201ENST00000233575 AMOTL2Q9Y2J4 779 aa25.54■■□□□ 1.68
SNX17-201ENST00000233575 SIRT1Q96EB6 747 aa25.53■■□□□ 1.68
SNX17-201ENST00000233575 NPHP4O75161 1426 aaPredicted RBP25.52■■□□□ 1.68
SNX17-201ENST00000233575 XRN1Q8IZH2 1706 aaKnown RBP25.51■■□□□ 1.67
SNX17-201ENST00000233575 SRPK2P78362 688 aaKnown RBP25.51■■□□□ 1.67
SNX17-201ENST00000233575 SLC12A5Q9H2X9 1139 aa25.5■■□□□ 1.67
SNX17-201ENST00000233575 HSPA2P54652 639 aa25.49■■□□□ 1.67
SNX17-201ENST00000233575 TMC1Q8TDI8 760 aa25.49■■□□□ 1.67
SNX17-201ENST00000233575 CDK19Q9BWU1 502 aa25.49■■□□□ 1.67
SNX17-201ENST00000233575 CCER2I3L3R5 266 aa25.48■■□□□ 1.67
SNX17-201ENST00000233575 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.48■■□□□ 1.67
SNX17-201ENST00000233575 PUS7Q96PZ0 661 aaKnown RBP25.47■■□□□ 1.67
SNX17-201ENST00000233575 PIK3R4Q99570 1358 aa25.47■■□□□ 1.67
SNX17-201ENST00000233575 KCNA6P17658 529 aa25.46■■□□□ 1.67
SNX17-201ENST00000233575 PTCH1Q13635 1447 aa25.46■■□□□ 1.67
SNX17-201ENST00000233575 LMTK3Q96Q04 1460 aa25.45■■□□□ 1.67
SNX17-201ENST00000233575 CHD2O14647 1828 aaKnown RBP25.45■■□□□ 1.66
SNX17-201ENST00000233575 YTHDC1Q96MU7 727 aaKnown RBP25.44■■□□□ 1.66
SNX17-201ENST00000233575 CARD14Q9BXL6 1004 aa25.44■■□□□ 1.66
SNX17-201ENST00000233575 CCDC184Q52MB2 194 aa25.43■■□□□ 1.66
SNX17-201ENST00000233575 WASLO00401 505 aaPredicted RBP25.42■■□□□ 1.66
SNX17-201ENST00000233575 CC2D1BQ5T0F9 858 aaKnown RBP25.42■■□□□ 1.66
SNX17-201ENST00000233575 KNSTRNQ9Y448 316 aa25.41■■□□□ 1.66
SNX17-201ENST00000233575 ATAD2Q6PL18 1390 aa25.41■■□□□ 1.66
SNX17-201ENST00000233575 KTN1Q86UP2 1357 aaKnown RBP25.4■■□□□ 1.66
SNX17-201ENST00000233575 ADGRB2O60241 1585 aa25.39■■□□□ 1.66
SNX17-201ENST00000233575 AMER1Q5JTC6 1135 aaPredicted RBP25.39■■□□□ 1.66
SNX17-201ENST00000233575 PARD3Q8TEW0 1356 aa25.38■■□□□ 1.65
SNX17-201ENST00000233575 NSD3Q9BZ95 1437 aa25.36■■□□□ 1.65
SNX17-201ENST00000233575 ANKRD36BQ8N2N9 1353 aa25.36■■□□□ 1.65
SNX17-201ENST00000233575 CD163L1Q9NR16 1453 aa25.35■■□□□ 1.65
SNX17-201ENST00000233575 RALBP1Q15311 655 aa25.35■■□□□ 1.65
SNX17-201ENST00000233575 CABP1Q9NZU7 370 aa25.35■■□□□ 1.65
SNX17-201ENST00000233575 A0A1W2PP64 1363 aa25.34■■□□□ 1.65
SNX17-201ENST00000233575 NINLQ9Y2I6 1382 aa25.34■■□□□ 1.65
SNX17-201ENST00000233575 RBM33Q96EV2 1170 aaKnown RBP25.34■■□□□ 1.65
SNX17-201ENST00000233575 PRR36Q9H6K5 1346 aa25.33■■□□□ 1.65
SNX17-201ENST00000233575 ATP7BP35670 1465 aa25.32■■□□□ 1.64
SNX17-201ENST00000233575 STRCQ7RTU9 1775 aa25.32■■□□□ 1.64
SNX17-201ENST00000233575 NUDT16Q96DE0 195 aaKnown RBP25.32■■□□□ 1.64
SNX17-201ENST00000233575 NUTM2FA1L443 756 aa25.31■■□□□ 1.64
SNX17-201ENST00000233575 MRS2Q9HD23 443 aa25.31■■□□□ 1.64
SNX17-201ENST00000233575 NWD1Q149M9 1564 aa25.3■■□□□ 1.64
SNX17-201ENST00000233575 MYBBP1AQ9BQG0 1328 aaKnown RBP25.3■■□□□ 1.64
SNX17-201ENST00000233575 PPIP5K1Q6PFW1 1433 aa25.29■■□□□ 1.64
SNX17-201ENST00000233575 NPC1L1Q9UHC9 1359 aa25.29■■□□□ 1.64
SNX17-201ENST00000233575 NALCNQ8IZF0 1738 aa25.28■■□□□ 1.64
SNX17-201ENST00000233575 CCDC61Q9Y6R9 512 aa25.27■■□□□ 1.64
SNX17-201ENST00000233575 USP32Q8NFA0 1604 aa25.26■■□□□ 1.63
SNX17-201ENST00000233575 TERF2IPQ9NYB0 399 aa25.26■■□□□ 1.63
SNX17-201ENST00000233575 TOPAZ1Q8N9V7 1692 aa25.25■■□□□ 1.63
SNX17-201ENST00000233575 STRCP1A6NGW2 1772 aa25.25■■□□□ 1.63
SNX17-201ENST00000233575 HDGFL2Q7Z4V5 671 aaPredicted RBP25.23■■□□□ 1.63
SNX17-201ENST00000233575 RGPD8O14715 1765 aaPredicted RBP25.23■■□□□ 1.63
SNX17-201ENST00000233575 CGNL1Q0VF96 1302 aa25.22■■□□□ 1.63
SNX17-201ENST00000233575 CDC42BPGQ6DT37 1551 aa25.21■■□□□ 1.63
SNX17-201ENST00000233575 CPSF1Q10570 1443 aaKnown RBP25.21■■□□□ 1.63
SNX17-201ENST00000233575 NLRP13Q86W25 1043 aa25.2■■□□□ 1.63
SNX17-201ENST00000233575 FMN2Q9NZ56 1722 aa25.2■■□□□ 1.62
SNX17-201ENST00000233575 NKTRP30414 1462 aaKnown RBP25.2■■□□□ 1.62
SNX17-201ENST00000233575 ADGRL3Q9HAR2 1447 aa25.19■■□□□ 1.62
SNX17-201ENST00000233575 BRD4O60885 1362 aaPredicted RBP25.19■■□□□ 1.62
SNX17-201ENST00000233575 PPP2R1AP30153 589 aa25.19■■□□□ 1.62
SNX17-201ENST00000233575 FAM9BQ8IZU0 186 aa25.19■■□□□ 1.62
SNX17-201ENST00000233575 AKAP12Q02952 1782 aa25.17■■□□□ 1.62
SNX17-201ENST00000233575 PROSER2Q86WR7 435 aaPredicted RBP25.17■■□□□ 1.62
SNX17-201ENST00000233575 ITSN1Q15811 1721 aa25.17■■□□□ 1.62
SNX17-201ENST00000233575 MON2Q7Z3U7 1717 aa25.16■■□□□ 1.62
SNX17-201ENST00000233575 C14orf37Q86TY3 774 aa25.15■■□□□ 1.62
SNX17-201ENST00000233575 GGNBP2Q9H3C7 697 aa25.15■■□□□ 1.62
SNX17-201ENST00000233575 FYB1O15117 783 aa25.14■■□□□ 1.62
SNX17-201ENST00000233575 MORC1Q86VD1 984 aa25.14■■□□□ 1.62
SNX17-201ENST00000233575 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.14■■□□□ 1.62
SNX17-201ENST00000233575 ACEP12821 1306 aa25.14■■□□□ 1.61
SNX17-201ENST00000233575 PLEKHG3A1L390 1219 aa25.13■■□□□ 1.61
SNX17-201ENST00000233575 PMFBP1Q8TBY8 1022 aa25.13■■□□□ 1.61
SNX17-201ENST00000233575 TNNT2P45379 298 aaPredicted RBP25.13■■□□□ 1.61
SNX17-201ENST00000233575 PNISRQ8TF01 805 aaKnown RBP25.13■■□□□ 1.61
SNX17-201ENST00000233575 NSD2O96028 1365 aa25.13■■□□□ 1.61
SNX17-201ENST00000233575 KIF20BQ96Q89 1820 aa25.13■■□□□ 1.61
SNX17-201ENST00000233575 ANKARQ7Z5J8 1434 aa25.13■■□□□ 1.61
SNX17-201ENST00000233575 EDC4Q6P2E9 1401 aaKnown RBP25.11■■□□□ 1.61
SNX17-201ENST00000233575 TMEM94Q12767 1356 aa25.1■■□□□ 1.61
SNX17-201ENST00000233575 ANKRD26Q9UPS8 1709 aa25.1■■□□□ 1.61
SNX17-201ENST00000233575 NRKQ7Z2Y5 1582 aa25.08■■□□□ 1.6
SNX17-201ENST00000233575 ZNF335Q9H4Z2 1342 aaPredicted RBP25.08■■□□□ 1.6
SNX17-201ENST00000233575 ZNF692Q9BU19 519 aaPredicted RBP25.07■■□□□ 1.6
SNX17-201ENST00000233575 NME9Q86XW9 330 aa25.07■■□□□ 1.6
SNX17-201ENST00000233575 USP6P35125 1406 aa25.06■■□□□ 1.6
SNX17-201ENST00000233575 POLR3AO14802 1390 aaPredicted RBP25.06■■□□□ 1.6
SNX17-201ENST00000233575 ZRANB1Q9UGI0 708 aa25.05■■□□□ 1.6
SNX17-201ENST00000233575 NGDNQ8NEJ9 315 aaKnown RBP25.04■■□□□ 1.6
SNX17-201ENST00000233575 CENPBP07199 599 aaPredicted RBP25.03■■□□□ 1.6
SNX17-201ENST00000233575 C19orf44Q9H6X5 657 aa25.03■■□□□ 1.6
SNX17-201ENST00000233575 XIRP1Q702N8 1843 aaKnown RBP25.03■■□□□ 1.6
SNX17-201ENST00000233575 HNRNPUQ00839 825 aaKnown RBP eCLIP25.02■■□□□ 1.6
SNX17-201ENST00000233575 TTC21BQ7Z4L5 1316 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms