RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 IFIT2P09913 472 aaKnown RBP9.87□□□□□ -0.83
APOB-201ENST00000233242 TOMM22Q9NS69 142 aa9.87□□□□□ -0.83
APOB-201ENST00000233242 GNAI1P63096 354 aa9.86□□□□□ -0.83
APOB-201ENST00000233242 PATL2C9JE40 543 aaKnown RBP9.86□□□□□ -0.83
APOB-201ENST00000233242 SDF4Q9BRK5 362 aa9.86□□□□□ -0.83
APOB-201ENST00000233242 CAGE1Q8TC20 777 aa9.86□□□□□ -0.83
APOB-201ENST00000233242 SOX12O15370 315 aa9.86□□□□□ -0.83
APOB-201ENST00000233242 RBM10P98175 930 aaKnown RBP9.86□□□□□ -0.83
APOB-201ENST00000233242 SMARCE1Q969G3 411 aa9.86□□□□□ -0.83
APOB-201ENST00000233242 PCMTD1Q96MG8 357 aaPredicted RBP9.86□□□□□ -0.83
APOB-201ENST00000233242 WWC1Q8IX03 1113 aa9.85□□□□□ -0.83
APOB-201ENST00000233242 TRDNQ13061 729 aa9.85□□□□□ -0.83
APOB-201ENST00000233242 WDR33Q9C0J8 1336 aaKnown RBP9.85□□□□□ -0.83
APOB-201ENST00000233242 TXLNBQ8N3L3 684 aa9.85□□□□□ -0.83
APOB-201ENST00000233242 CALCOCO1Q9P1Z2 691 aa9.85□□□□□ -0.83
APOB-201ENST00000233242 GCC1Q96CN9 775 aa9.85□□□□□ -0.83
APOB-201ENST00000233242 NEXNQ0ZGT2 675 aa9.84□□□□□ -0.83
APOB-201ENST00000233242 CUX1P39880 1505 aa9.84□□□□□ -0.83
APOB-201ENST00000233242 MROH2BQ7Z745 1585 aa9.84□□□□□ -0.83
APOB-201ENST00000233242 ZNF396Q96N95 335 aaPredicted RBP9.84□□□□□ -0.83
APOB-201ENST00000233242 FAM107BQ9H098 131 aa9.84□□□□□ -0.83
APOB-201ENST00000233242 AEBP1Q8IUX7 1158 aa9.84□□□□□ -0.83
APOB-201ENST00000233242 IQCEQ6IPM2 695 aa9.84□□□□□ -0.83
APOB-201ENST00000233242 HIP1O00291 1037 aa9.84□□□□□ -0.83
APOB-201ENST00000233242 INCENPQ9NQS7 918 aa9.84□□□□□ -0.83
APOB-201ENST00000233242 LNPKQ9C0E8 428 aa9.84□□□□□ -0.83
APOB-201ENST00000233242 GOLGA6L10A6NI86 522 aa9.84□□□□□ -0.83
APOB-201ENST00000233242 ZRSR2Q15696 482 aaKnown RBP9.84□□□□□ -0.83
APOB-201ENST00000233242 PRPF40AO75400 957 aaKnown RBP9.84□□□□□ -0.83
APOB-201ENST00000233242 FHOD3Q2V2M9 1422 aa9.83□□□□□ -0.84
APOB-201ENST00000233242 K7ELQ4 463 aaPredicted RBP9.83□□□□□ -0.84
APOB-201ENST00000233242 JMYQ8N9B5 988 aa9.83□□□□□ -0.84
APOB-201ENST00000233242 DHX16O60231 1041 aaKnown RBP9.83□□□□□ -0.84
APOB-201ENST00000233242 PANK1Q8TE04 598 aa9.83□□□□□ -0.84
APOB-201ENST00000233242 SMC2O95347 1197 aa9.82□□□□□ -0.84
APOB-201ENST00000233242 AXDND1Q5T1B0 1012 aaPredicted RBP9.82□□□□□ -0.84
APOB-201ENST00000233242 COG3Q96JB2 828 aa9.82□□□□□ -0.84
APOB-201ENST00000233242 C9orf78Q9NZ63 289 aaPredicted RBP9.82□□□□□ -0.84
APOB-201ENST00000233242 G3BP1Q13283 466 aaKnown RBP eCLIP9.82□□□□□ -0.84
APOB-201ENST00000233242 FILIP1LQ4L180 1135 aa9.82□□□□□ -0.84
APOB-201ENST00000233242 CBFA2T2O43439 604 aa9.82□□□□□ -0.84
APOB-201ENST00000233242 AMPHP49418 695 aa9.82□□□□□ -0.84
APOB-201ENST00000233242 NAP1L1P55209 391 aaKnown RBP9.82□□□□□ -0.84
APOB-201ENST00000233242 DIAPH1O60610 1272 aaKnown RBP9.82□□□□□ -0.84
APOB-201ENST00000233242 RIPK4P57078 832 aa9.82□□□□□ -0.84
APOB-201ENST00000233242 CNTROBQ8N137 903 aa9.81□□□□□ -0.84
APOB-201ENST00000233242 SCAPERQ9BY12 1400 aa9.81□□□□□ -0.84
APOB-201ENST00000233242 LUC7LQ9NQ29 371 aaKnown RBP9.81□□□□□ -0.84
APOB-201ENST00000233242 NEK4P51957 841 aa9.81□□□□□ -0.84
APOB-201ENST00000233242 ERLIN2O94905 339 aa9.81□□□□□ -0.84
APOB-201ENST00000233242 DYNC1I1O14576 645 aa9.81□□□□□ -0.84
APOB-201ENST00000233242 BRMS1Q9HCU9 246 aa9.81□□□□□ -0.84
APOB-201ENST00000233242 MYOM3Q5VTT5 1437 aa9.81□□□□□ -0.84
APOB-201ENST00000233242 PDZRN3Q9UPQ7 1066 aa9.81□□□□□ -0.84
APOB-201ENST00000233242 PDILTQ8N807 584 aa9.8□□□□□ -0.84
APOB-201ENST00000233242 ANKRD1Q15327 319 aa9.8□□□□□ -0.84
APOB-201ENST00000233242 GBP3Q9H0R5 595 aa9.8□□□□□ -0.84
APOB-201ENST00000233242 TMX4Q9H1E5 349 aaPredicted RBP9.8□□□□□ -0.84
APOB-201ENST00000233242 FGD6Q6ZV73 1430 aa9.8□□□□□ -0.84
APOB-201ENST00000233242 DDX58O95786 925 aaKnown RBP9.8□□□□□ -0.84
APOB-201ENST00000233242 CGNQ9P2M7 1197 aaKnown RBP9.8□□□□□ -0.84
APOB-201ENST00000233242 PDE4CQ08493 712 aa9.79□□□□□ -0.84
APOB-201ENST00000233242 DACH1Q9UI36 760 aa9.79□□□□□ -0.84
APOB-201ENST00000233242 TNMDQ9H2S6 317 aa9.79□□□□□ -0.84
APOB-201ENST00000233242 ZNHIT6Q9NWK9 470 aaKnown RBP9.79□□□□□ -0.84
APOB-201ENST00000233242 XBP1P17861 261 aa9.79□□□□□ -0.84
APOB-201ENST00000233242 RALYLQ86SE5 291 aaKnown RBP9.79□□□□□ -0.84
APOB-201ENST00000233242 CEP57L1Q8IYX8 460 aa9.79□□□□□ -0.84
APOB-201ENST00000233242 VGFO15240 615 aaPredicted RBP9.79□□□□□ -0.84
APOB-201ENST00000233242 GGT6Q6P531 493 aa9.79□□□□□ -0.84
APOB-201ENST00000233242 UBXN4Q92575 508 aa9.79□□□□□ -0.84
APOB-201ENST00000233242 GNAI3P08754 354 aa9.78□□□□□ -0.84
APOB-201ENST00000233242 CSB-PGBD3P0DP91 1061 aa9.78□□□□□ -0.84
APOB-201ENST00000233242 AMOTL1Q8IY63 956 aa9.78□□□□□ -0.84
APOB-201ENST00000233242 HSP90AB3PQ58FF7 597 aa9.78□□□□□ -0.84
APOB-201ENST00000233242 ERICH2A1L162 156 aa9.78□□□□□ -0.84
APOB-201ENST00000233242 OFD1O75665 1012 aa9.78□□□□□ -0.84
APOB-201ENST00000233242 KRT85P78386 507 aa9.78□□□□□ -0.84
APOB-201ENST00000233242 PPFIBP1Q86W92 1011 aa9.78□□□□□ -0.84
APOB-201ENST00000233242 PRIMPOLQ96LW4 560 aa9.78□□□□□ -0.84
APOB-201ENST00000233242 NFXL1Q6ZNB6 911 aa9.77□□□□□ -0.84
APOB-201ENST00000233242 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.77□□□□□ -0.84
APOB-201ENST00000233242 ZNF428Q96B54 188 aa9.77□□□□□ -0.84
APOB-201ENST00000233242 ADAMTS8Q9UP79 889 aa9.77□□□□□ -0.84
APOB-201ENST00000233242 FIBPO43427 364 aa9.77□□□□□ -0.85
APOB-201ENST00000233242 PLEKHH2Q8IVE3 1493 aa9.77□□□□□ -0.85
APOB-201ENST00000233242 NEMFO60524 1076 aa9.77□□□□□ -0.85
APOB-201ENST00000233242 ELL2O00472 640 aaPredicted RBP9.77□□□□□ -0.85
APOB-201ENST00000233242 MCM3P25205 808 aa9.77□□□□□ -0.85
APOB-201ENST00000233242 VPS53Q5VIR6 699 aa9.77□□□□□ -0.85
APOB-201ENST00000233242 AKNAQ7Z591 1439 aa9.77□□□□□ -0.85
APOB-201ENST00000233242 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.77□□□□□ -0.85
APOB-201ENST00000233242 FKBP5Q13451 457 aaPredicted RBP9.77□□□□□ -0.85
APOB-201ENST00000233242 TMCO3Q6UWJ1 677 aa9.77□□□□□ -0.85
APOB-201ENST00000233242 MAP9Q49MG5 647 aa9.77□□□□□ -0.85
APOB-201ENST00000233242 KIF18AQ8NI77 898 aa9.76□□□□□ -0.85
APOB-201ENST00000233242 ZSCAN31Q96LW9 406 aaPredicted RBP9.76□□□□□ -0.85
APOB-201ENST00000233242 PLEKHH1Q9ULM0 1364 aa9.76□□□□□ -0.85
APOB-201ENST00000233242 ZNF330Q9Y3S2 320 aaPredicted RBP9.76□□□□□ -0.85
APOB-201ENST00000233242 PNISRQ8TF01 805 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 266.1 ms