RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 TSPYL4Q9UJ04 414 aa8.74□□□□□ -1.01
CPS1-201ENST00000233072 SMC3Q9UQE7 1217 aa8.73□□□□□ -1.01
CPS1-201ENST00000233072 DAPK1P53355 1430 aa8.73□□□□□ -1.01
CPS1-201ENST00000233072 NCBP3Q53F19 620 aaKnown RBP8.73□□□□□ -1.01
CPS1-201ENST00000233072 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.73□□□□□ -1.01
CPS1-201ENST00000233072 ATF3P18847 181 aa8.73□□□□□ -1.01
CPS1-201ENST00000233072 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.73□□□□□ -1.01
CPS1-201ENST00000233072 RAPGEF4Q8WZA2 1011 aa8.73□□□□□ -1.01
CPS1-201ENST00000233072 PCMTD1Q96MG8 357 aaPredicted RBP8.73□□□□□ -1.01
CPS1-201ENST00000233072 RAD54L2Q9Y4B4 1467 aa8.73□□□□□ -1.01
CPS1-201ENST00000233072 CCP110O43303 1012 aa8.73□□□□□ -1.01
CPS1-201ENST00000233072 SASS6Q6UVJ0 657 aa8.73□□□□□ -1.01
CPS1-201ENST00000233072 CNTROBQ8N137 903 aa8.73□□□□□ -1.01
CPS1-201ENST00000233072 EXOC6Q8TAG9 804 aa8.73□□□□□ -1.01
CPS1-201ENST00000233072 RUSC2Q8N2Y8 1516 aa8.73□□□□□ -1.01
CPS1-201ENST00000233072 CT47B1P0C2W7 299 aaPredicted RBP8.72□□□□□ -1.01
CPS1-201ENST00000233072 AEBP2Q6ZN18 517 aaPredicted RBP8.72□□□□□ -1.01
CPS1-201ENST00000233072 MCM2P49736 904 aa8.72□□□□□ -1.01
CPS1-201ENST00000233072 CCDC73Q6ZRK6 1079 aa8.72□□□□□ -1.01
CPS1-201ENST00000233072 AK7Q96M32 723 aa8.72□□□□□ -1.01
CPS1-201ENST00000233072 TOP2BQ02880 1626 aa8.72□□□□□ -1.01
CPS1-201ENST00000233072 FKBP5Q13451 457 aaPredicted RBP8.72□□□□□ -1.01
CPS1-201ENST00000233072 RBM33Q96EV2 1170 aaKnown RBP8.72□□□□□ -1.01
CPS1-201ENST00000233072 COG6Q9Y2V7 657 aa8.72□□□□□ -1.01
CPS1-201ENST00000233072 EIF2S2P20042 333 aaKnown RBP8.72□□□□□ -1.01
CPS1-201ENST00000233072 CCDC30Q5VVM6 783 aa8.72□□□□□ -1.01
CPS1-201ENST00000233072 PNISRQ8TF01 805 aaKnown RBP8.72□□□□□ -1.01
CPS1-201ENST00000233072 CCDC43Q96MW1 224 aaKnown RBP8.72□□□□□ -1.01
CPS1-201ENST00000233072 ARGLU1Q9NWB6 273 aaPredicted RBP8.72□□□□□ -1.01
CPS1-201ENST00000233072 APAF1O14727 1248 aa8.71□□□□□ -1.01
CPS1-201ENST00000233072 OLFM4Q6UX06 510 aa8.71□□□□□ -1.01
CPS1-201ENST00000233072 BICD2Q8TD16 824 aa8.71□□□□□ -1.01
CPS1-201ENST00000233072 SLC3A2P08195 630 aaKnown RBP8.71□□□□□ -1.01
CPS1-201ENST00000233072 GNAI3P08754 354 aa8.71□□□□□ -1.01
CPS1-201ENST00000233072 APPP05067 770 aa8.71□□□□□ -1.02
CPS1-201ENST00000233072 RDXP35241 583 aaKnown RBP8.71□□□□□ -1.02
CPS1-201ENST00000233072 MYO6Q9UM54 1294 aa8.71□□□□□ -1.02
CPS1-201ENST00000233072 PIP4K2AP48426 406 aaPredicted RBP8.71□□□□□ -1.02
CPS1-201ENST00000233072 RALYLQ86SE5 291 aaKnown RBP8.71□□□□□ -1.02
CPS1-201ENST00000233072 UBTFL1P0CB47 393 aaPredicted RBP8.7□□□□□ -1.02
CPS1-201ENST00000233072 CCDC39Q9UFE4 941 aa8.7□□□□□ -1.02
CPS1-201ENST00000233072 SART3Q15020 963 aaKnown RBP8.7□□□□□ -1.02
CPS1-201ENST00000233072 KIAA1107Q9UPP5 1409 aa8.7□□□□□ -1.02
CPS1-201ENST00000233072 RPGRIP1LQ68CZ1 1315 aa8.7□□□□□ -1.02
CPS1-201ENST00000233072 KIF6Q6ZMV9 814 aa8.7□□□□□ -1.02
CPS1-201ENST00000233072 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
CPS1-201ENST00000233072 CUL7Q14999 1698 aa8.7□□□□□ -1.02
CPS1-201ENST00000233072 PLEKHO1Q53GL0 409 aaPredicted RBP8.69□□□□□ -1.02
CPS1-201ENST00000233072 FOXD4L5Q5VV16 416 aaPredicted RBP8.69□□□□□ -1.02
CPS1-201ENST00000233072 FOXD4L4Q8WXT5 416 aaPredicted RBP8.69□□□□□ -1.02
CPS1-201ENST00000233072 TBC1D2BQ9UPU7 963 aa8.69□□□□□ -1.02
CPS1-201ENST00000233072 GCC1Q96CN9 775 aa8.69□□□□□ -1.02
CPS1-201ENST00000233072 DHX16O60231 1041 aaKnown RBP8.69□□□□□ -1.02
CPS1-201ENST00000233072 C9orf84Q5VXU9 1444 aa8.69□□□□□ -1.02
CPS1-201ENST00000233072 POGZQ7Z3K3 1410 aa8.69□□□□□ -1.02
CPS1-201ENST00000233072 DNMBPQ6XZF7 1577 aa8.69□□□□□ -1.02
CPS1-201ENST00000233072 CCDC141Q6ZP82 1450 aa8.69□□□□□ -1.02
CPS1-201ENST00000233072 NOM1Q5C9Z4 860 aaKnown RBP8.69□□□□□ -1.02
CPS1-201ENST00000233072 ERCC4Q92889 916 aaPredicted RBP8.69□□□□□ -1.02
CPS1-201ENST00000233072 CWC22Q9HCG8 908 aaKnown RBP8.69□□□□□ -1.02
CPS1-201ENST00000233072 CFTRP13569 1480 aa8.68□□□□□ -1.02
CPS1-201ENST00000233072 TIAM1Q13009 1591 aa8.68□□□□□ -1.02
CPS1-201ENST00000233072 NUTM2FA1L443 756 aa8.68□□□□□ -1.02
CPS1-201ENST00000233072 RUFY1Q96T51 708 aa8.68□□□□□ -1.02
CPS1-201ENST00000233072 MSH5O43196 834 aa8.68□□□□□ -1.02
CPS1-201ENST00000233072 TXLNBQ8N3L3 684 aa8.68□□□□□ -1.02
CPS1-201ENST00000233072 MTERF4Q7Z6M4 381 aaKnown RBP8.68□□□□□ -1.02
CPS1-201ENST00000233072 BCL2L13Q9BXK5 485 aa8.68□□□□□ -1.02
CPS1-201ENST00000233072 C22orf23Q9BZE7 217 aa8.68□□□□□ -1.02
CPS1-201ENST00000233072 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.67□□□□□ -1.02
CPS1-201ENST00000233072 ZNF396Q96N95 335 aaPredicted RBP8.67□□□□□ -1.02
CPS1-201ENST00000233072 ELL2O00472 640 aaPredicted RBP8.67□□□□□ -1.02
CPS1-201ENST00000233072 CCDC173Q0VFZ6 552 aa8.67□□□□□ -1.02
CPS1-201ENST00000233072 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.67□□□□□ -1.02
CPS1-201ENST00000233072 PRG4Q92954 1404 aaPredicted RBP8.67□□□□□ -1.02
CPS1-201ENST00000233072 MBD3O95983 291 aa8.67□□□□□ -1.02
CPS1-201ENST00000233072 FAM69CQ0P6D2 419 aa8.67□□□□□ -1.02
CPS1-201ENST00000233072 CCAR2Q8N163 923 aaKnown RBP8.67□□□□□ -1.02
CPS1-201ENST00000233072 ZNF692Q9BU19 519 aaPredicted RBP8.67□□□□□ -1.02
CPS1-201ENST00000233072 PDIA4P13667 645 aaKnown RBP8.66□□□□□ -1.02
CPS1-201ENST00000233072 PDCP20941 246 aa8.66□□□□□ -1.02
CPS1-201ENST00000233072 HOMER1Q86YM7 354 aa8.66□□□□□ -1.02
CPS1-201ENST00000233072 GNL3LQ9NVN8 582 aaKnown RBP8.66□□□□□ -1.02
CPS1-201ENST00000233072 PLIN1O60240 522 aa8.66□□□□□ -1.02
CPS1-201ENST00000233072 EPS15P42566 896 aa8.66□□□□□ -1.02
CPS1-201ENST00000233072 AEBP1Q8IUX7 1158 aa8.66□□□□□ -1.02
CPS1-201ENST00000233072 VSIG10Q8N0Z9 540 aa8.66□□□□□ -1.02
CPS1-201ENST00000233072 SMARCE1Q969G3 411 aa8.66□□□□□ -1.02
CPS1-201ENST00000233072 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.66□□□□□ -1.02
CPS1-201ENST00000233072 TROQ12816 1431 aaPredicted RBP8.66□□□□□ -1.02
CPS1-201ENST00000233072 CCT4P50991 539 aaKnown RBP8.66□□□□□ -1.02
CPS1-201ENST00000233072 ANKRD1Q15327 319 aa8.66□□□□□ -1.02
CPS1-201ENST00000233072 FBXW7Q969H0 707 aa8.66□□□□□ -1.02
CPS1-201ENST00000233072 RABEP1Q15276 862 aa8.66□□□□□ -1.02
CPS1-201ENST00000233072 TXLNAP40222 546 aa8.65□□□□□ -1.02
CPS1-201ENST00000233072 DACH1Q9UI36 760 aa8.65□□□□□ -1.02
CPS1-201ENST00000233072 VPS37CA5D8V6 355 aaPredicted RBP8.65□□□□□ -1.02
CPS1-201ENST00000233072 ZSCAN25Q6NSZ9 544 aa8.65□□□□□ -1.02
CPS1-201ENST00000233072 AQRO60306 1485 aaKnown RBP eCLIP8.65□□□□□ -1.02
CPS1-201ENST00000233072 ATAD2Q6PL18 1390 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms