RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 K7ELQ4 463 aaPredicted RBP14.03□□□□□ -0.16
PCDH12-201ENST00000231484 APAF1O14727 1248 aa14.03□□□□□ -0.16
PCDH12-201ENST00000231484 TRIM29Q14134 588 aa14.03□□□□□ -0.16
PCDH12-201ENST00000231484 NBPF1Q3BBV0 1214 aa14.02□□□□□ -0.16
PCDH12-201ENST00000231484 CSB-PGBD3P0DP91 1061 aa14.02□□□□□ -0.16
PCDH12-201ENST00000231484 CCDC47Q96A33 483 aaKnown RBP14.02□□□□□ -0.17
PCDH12-201ENST00000231484 CCDC7Q96M83 1385 aa14.02□□□□□ -0.17
PCDH12-201ENST00000231484 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.17
PCDH12-201ENST00000231484 SMG6Q86US8 1419 aaKnown RBP14.02□□□□□ -0.17
PCDH12-201ENST00000231484 MCM5P33992 734 aa14.01□□□□□ -0.17
PCDH12-201ENST00000231484 MYO6Q9UM54 1294 aa14.01□□□□□ -0.17
PCDH12-201ENST00000231484 TTLL5Q6EMB2 1281 aa14.01□□□□□ -0.17
PCDH12-201ENST00000231484 CCDC9Q9Y3X0 531 aaKnown RBP14.01□□□□□ -0.17
PCDH12-201ENST00000231484 STK11IPQ8N1F8 1099 aa14.01□□□□□ -0.17
PCDH12-201ENST00000231484 FAM107BQ9H098 131 aa14.01□□□□□ -0.17
PCDH12-201ENST00000231484 ROCK1Q13464 1354 aa14.01□□□□□ -0.17
PCDH12-201ENST00000231484 USP47Q96K76 1375 aa14.01□□□□□ -0.17
PCDH12-201ENST00000231484 CPLX2Q6PUV4 134 aaKnown RBP14.01□□□□□ -0.17
PCDH12-201ENST00000231484 PANK1Q8TE04 598 aa14.01□□□□□ -0.17
PCDH12-201ENST00000231484 CCDC102AQ96A19 550 aa14.01□□□□□ -0.17
PCDH12-201ENST00000231484 DDX11Q96FC9 970 aa14.01□□□□□ -0.17
PCDH12-201ENST00000231484 GOLGA6L10A6NI86 522 aa14□□□□□ -0.17
PCDH12-201ENST00000231484 CCDC27Q2M243 656 aa14□□□□□ -0.17
PCDH12-201ENST00000231484 SDF4Q9BRK5 362 aa14□□□□□ -0.17
PCDH12-201ENST00000231484 PDZRN3Q9UPQ7 1066 aa14□□□□□ -0.17
PCDH12-201ENST00000231484 ST20-MTHFSA0A0A6YYL1 179 aa14□□□□□ -0.17
PCDH12-201ENST00000231484 UBXN4Q92575 508 aa14□□□□□ -0.17
PCDH12-201ENST00000231484 SMARCE1Q969G3 411 aa14□□□□□ -0.17
PCDH12-201ENST00000231484 NOL10Q9BSC4 688 aaKnown RBP14□□□□□ -0.17
PCDH12-201ENST00000231484 GTF2F1P35269 517 aaKnown RBP eCLIP14□□□□□ -0.17
PCDH12-201ENST00000231484 IPO4Q8TEX9 1081 aaKnown RBP13.99□□□□□ -0.17
PCDH12-201ENST00000231484 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
PCDH12-201ENST00000231484 KIF2AO00139 706 aaPredicted RBP13.99□□□□□ -0.17
PCDH12-201ENST00000231484 C11orf95C9JLR9 678 aaPredicted RBP13.99□□□□□ -0.17
PCDH12-201ENST00000231484 AKAP17AQ02040 695 aaKnown RBP13.99□□□□□ -0.17
PCDH12-201ENST00000231484 SHTN1A0MZ66 631 aa13.99□□□□□ -0.17
PCDH12-201ENST00000231484 KINO60870 393 aaKnown RBP13.99□□□□□ -0.17
PCDH12-201ENST00000231484 LRRCC1Q9C099 1032 aa13.98□□□□□ -0.17
PCDH12-201ENST00000231484 PDIA4P13667 645 aaKnown RBP13.98□□□□□ -0.17
PCDH12-201ENST00000231484 PRIMPOLQ96LW4 560 aa13.98□□□□□ -0.17
PCDH12-201ENST00000231484 TOMM22Q9NS69 142 aa13.98□□□□□ -0.17
PCDH12-201ENST00000231484 BRD4O60885 1362 aaPredicted RBP13.98□□□□□ -0.17
PCDH12-201ENST00000231484 FIBPO43427 364 aa13.98□□□□□ -0.17
PCDH12-201ENST00000231484 SMAP1Q8IYB5 467 aaPredicted RBP13.98□□□□□ -0.17
PCDH12-201ENST00000231484 CPLX1O14810 134 aa13.97□□□□□ -0.17
PCDH12-201ENST00000231484 SYNE3Q6ZMZ3 975 aa13.97□□□□□ -0.17
PCDH12-201ENST00000231484 API5Q9BZZ5 524 aaKnown RBP13.97□□□□□ -0.17
PCDH12-201ENST00000231484 PRM3Q9NNZ6 103 aa13.97□□□□□ -0.17
PCDH12-201ENST00000231484 NUP155O75694 1391 aa13.97□□□□□ -0.17
PCDH12-201ENST00000231484 ANKRD30AQ9BXX3 1397 aa13.97□□□□□ -0.17
PCDH12-201ENST00000231484 RSPH4AQ5TD94 716 aa13.97□□□□□ -0.17
PCDH12-201ENST00000231484 TNMDQ9H2S6 317 aa13.96□□□□□ -0.17
PCDH12-201ENST00000231484 FILIP1Q7Z7B0 1213 aa13.96□□□□□ -0.17
PCDH12-201ENST00000231484 MARCH6O60337 910 aa13.96□□□□□ -0.17
PCDH12-201ENST00000231484 CUX2O14529 1486 aa13.96□□□□□ -0.18
PCDH12-201ENST00000231484 WDR33Q9C0J8 1336 aaKnown RBP13.95□□□□□ -0.18
PCDH12-201ENST00000231484 NEK4P51957 841 aa13.95□□□□□ -0.18
PCDH12-201ENST00000231484 SYCE3A1L190 88 aa13.95□□□□□ -0.18
PCDH12-201ENST00000231484 TNNT1P13805 278 aa13.95□□□□□ -0.18
PCDH12-201ENST00000231484 GBP3Q9H0R5 595 aa13.95□□□□□ -0.18
PCDH12-201ENST00000231484 NEXNQ0ZGT2 675 aa13.95□□□□□ -0.18
PCDH12-201ENST00000231484 PTPN14Q15678 1187 aa13.95□□□□□ -0.18
PCDH12-201ENST00000231484 LTV1Q96GA3 475 aaPredicted RBP13.95□□□□□ -0.18
PCDH12-201ENST00000231484 CCDC94Q9BW85 323 aaPredicted RBP13.95□□□□□ -0.18
PCDH12-201ENST00000231484 POLR3GO15318 223 aaPredicted RBP13.94□□□□□ -0.18
PCDH12-201ENST00000231484 FAM193AP78312 1265 aa13.94□□□□□ -0.18
PCDH12-201ENST00000231484 ABCC8Q09428 1581 aa13.94□□□□□ -0.18
PCDH12-201ENST00000231484 NUTM2FA1L443 756 aa13.94□□□□□ -0.18
PCDH12-201ENST00000231484 RBM25P49756 843 aaKnown RBP13.94□□□□□ -0.18
PCDH12-201ENST00000231484 TXLNBQ8N3L3 684 aa13.94□□□□□ -0.18
PCDH12-201ENST00000231484 ELL2O00472 640 aaPredicted RBP13.94□□□□□ -0.18
PCDH12-201ENST00000231484 FILIP1LQ4L180 1135 aa13.94□□□□□ -0.18
PCDH12-201ENST00000231484 TICAM2Q86XR7 235 aa13.94□□□□□ -0.18
PCDH12-201ENST00000231484 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDH12-201ENST00000231484 FOSBP53539 338 aa13.94□□□□□ -0.18
PCDH12-201ENST00000231484 CARMIL1Q5VZK9 1371 aa13.94□□□□□ -0.18
PCDH12-201ENST00000231484 PDCP20941 246 aa13.93□□□□□ -0.18
PCDH12-201ENST00000231484 DHX37Q8IY37 1157 aaKnown RBP13.93□□□□□ -0.18
PCDH12-201ENST00000231484 FMNL2Q96PY5 1086 aa13.93□□□□□ -0.18
PCDH12-201ENST00000231484 NEFHP12036 1026 aa13.93□□□□□ -0.18
PCDH12-201ENST00000231484 PLCD3Q8N3E9 789 aa13.93□□□□□ -0.18
PCDH12-201ENST00000231484 KIF18AQ8NI77 898 aa13.93□□□□□ -0.18
PCDH12-201ENST00000231484 TERF2IPQ9NYB0 399 aa13.93□□□□□ -0.18
PCDH12-201ENST00000231484 SERPINC1P01008 464 aa13.92□□□□□ -0.18
PCDH12-201ENST00000231484 HDGFP51858 240 aaKnown RBP13.92□□□□□ -0.18
PCDH12-201ENST00000231484 KRT222Q8N1A0 295 aa13.92□□□□□ -0.18
PCDH12-201ENST00000231484 CBFA2T2O43439 604 aa13.92□□□□□ -0.18
PCDH12-201ENST00000231484 FAM177A1Q8N128 213 aaPredicted RBP13.92□□□□□ -0.18
PCDH12-201ENST00000231484 PDE3AQ14432 1141 aa13.92□□□□□ -0.18
PCDH12-201ENST00000231484 PSMA5P28066 241 aa13.92□□□□□ -0.18
PCDH12-201ENST00000231484 IQCEQ6IPM2 695 aa13.92□□□□□ -0.18
PCDH12-201ENST00000231484 ERLIN2O94905 339 aa13.91□□□□□ -0.18
PCDH12-201ENST00000231484 CDCA7LQ96GN5 454 aa13.91□□□□□ -0.18
PCDH12-201ENST00000231484 BMS1Q14692 1282 aaKnown RBP13.91□□□□□ -0.18
PCDH12-201ENST00000231484 NINLQ9Y2I6 1382 aa13.91□□□□□ -0.18
PCDH12-201ENST00000231484 CT47A1Q5JQC4 288 aaPredicted RBP13.91□□□□□ -0.18
PCDH12-201ENST00000231484 MICALCLQ6ZW33 695 aa13.91□□□□□ -0.18
PCDH12-201ENST00000231484 DNAAF4Q8WXU2 420 aa13.91□□□□□ -0.18
PCDH12-201ENST00000231484 RUNDC1Q96C34 613 aa13.91□□□□□ -0.18
PCDH12-201ENST00000231484 IBSPP21815 317 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms