RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 C14orf37Q86TY3 774 aa19.95■□□□□ 0.78
VEGFA-201ENST00000230480 ATF3P18847 181 aa19.93■□□□□ 0.78
VEGFA-201ENST00000230480 C1orf167Q5SNV9 1468 aa19.92■□□□□ 0.78
VEGFA-201ENST00000230480 CDC42BPGQ6DT37 1551 aa19.92■□□□□ 0.78
VEGFA-201ENST00000230480 ARHGEF28Q8N1W1 1705 aaKnown RBP19.92■□□□□ 0.78
VEGFA-201ENST00000230480 PRAM1Q96QH2 718 aa19.91■□□□□ 0.78
VEGFA-201ENST00000230480 TRAK1Q9UPV9 953 aa19.91■□□□□ 0.78
VEGFA-201ENST00000230480 COL16A1Q07092 1604 aaPredicted RBP19.91■□□□□ 0.78
VEGFA-201ENST00000230480 ORAI2Q96SN7 254 aa19.9■□□□□ 0.78
VEGFA-201ENST00000230480 TRPM1Q7Z4N2 1603 aa19.9■□□□□ 0.78
VEGFA-201ENST00000230480 RGPD8O14715 1765 aaPredicted RBP19.89■□□□□ 0.77
VEGFA-201ENST00000230480 AHDC1Q5TGY3 1603 aaPredicted RBP19.89■□□□□ 0.77
VEGFA-201ENST00000230480 DDX17Q92841 729 aaKnown RBP19.89■□□□□ 0.77
VEGFA-201ENST00000230480 FMN2Q9NZ56 1722 aa19.89■□□□□ 0.77
VEGFA-201ENST00000230480 NHSL1Q5SYE7 1610 aa19.88■□□□□ 0.77
VEGFA-201ENST00000230480 PHLPP1O60346 1717 aa19.88■□□□□ 0.77
VEGFA-201ENST00000230480 SAFB2Q14151 953 aaKnown RBP eCLIP19.86■□□□□ 0.77
VEGFA-201ENST00000230480 USP32Q8NFA0 1604 aa19.86■□□□□ 0.77
VEGFA-201ENST00000230480 ADGRB2O60241 1585 aa19.84■□□□□ 0.77
VEGFA-201ENST00000230480 NUTM2FA1L443 756 aa19.82■□□□□ 0.76
VEGFA-201ENST00000230480 PRR36Q9H6K5 1346 aa19.81■□□□□ 0.76
VEGFA-201ENST00000230480 HIRIP3Q9BW71 556 aaPredicted RBP19.8■□□□□ 0.76
VEGFA-201ENST00000230480 GPRASP1Q5JY77 1395 aa19.8■□□□□ 0.76
VEGFA-201ENST00000230480 MINK1Q8N4C8 1332 aaPredicted RBP19.79■□□□□ 0.76
VEGFA-201ENST00000230480 POGKQ9P215 609 aa19.79■□□□□ 0.76
VEGFA-201ENST00000230480 MED1Q15648 1581 aaPredicted RBP19.78■□□□□ 0.76
VEGFA-201ENST00000230480 ILDR2Q71H61 639 aa19.78■□□□□ 0.76
VEGFA-201ENST00000230480 SOS2Q07890 1332 aaPredicted RBP19.77■□□□□ 0.76
VEGFA-201ENST00000230480 PXDNQ92626 1479 aa19.76■□□□□ 0.75
VEGFA-201ENST00000230480 TONSLQ96HA7 1378 aa19.75■□□□□ 0.75
VEGFA-201ENST00000230480 WASLO00401 505 aaPredicted RBP19.75■□□□□ 0.75
VEGFA-201ENST00000230480 ESCO1Q5FWF5 840 aa19.75■□□□□ 0.75
VEGFA-201ENST00000230480 SHPRHQ149N8 1683 aa19.74■□□□□ 0.75
VEGFA-201ENST00000230480 CLSPNQ9HAW4 1339 aa19.74■□□□□ 0.75
VEGFA-201ENST00000230480 RALGAPBQ86X10 1494 aa19.73■□□□□ 0.75
VEGFA-201ENST00000230480 LRP6O75581 1613 aa19.73■□□□□ 0.75
VEGFA-201ENST00000230480 FOXO3O43524 673 aa19.73■□□□□ 0.75
VEGFA-201ENST00000230480 RGS17Q9UGC6 210 aaPredicted RBP19.73■□□□□ 0.75
VEGFA-201ENST00000230480 JCADQ9P266 1359 aa19.72■□□□□ 0.75
VEGFA-201ENST00000230480 ANKARQ7Z5J8 1434 aa19.71■□□□□ 0.75
VEGFA-201ENST00000230480 QRICH2Q9H0J4 1663 aa19.71■□□□□ 0.75
VEGFA-201ENST00000230480 TULP4Q9NRJ4 1543 aa19.71■□□□□ 0.75
VEGFA-201ENST00000230480 ROCK2O75116 1388 aaKnown RBP19.7■□□□□ 0.74
VEGFA-201ENST00000230480 SOCS7O14512 581 aa19.7■□□□□ 0.74
VEGFA-201ENST00000230480 XPCQ01831 940 aaPredicted RBP19.7■□□□□ 0.74
VEGFA-201ENST00000230480 ATP7BP35670 1465 aa19.7■□□□□ 0.74
VEGFA-201ENST00000230480 PNPLA6Q8IY17 1366 aa19.7■□□□□ 0.74
VEGFA-201ENST00000230480 CDK19Q9BWU1 502 aa19.69■□□□□ 0.74
VEGFA-201ENST00000230480 CENPJQ9HC77 1338 aaPredicted RBP19.69■□□□□ 0.74
VEGFA-201ENST00000230480 KIF1AQ12756 1690 aa19.68■□□□□ 0.74
VEGFA-201ENST00000230480 PHF8Q9UPP1 1060 aa19.68■□□□□ 0.74
VEGFA-201ENST00000230480 TOPAZ1Q8N9V7 1692 aa19.68■□□□□ 0.74
VEGFA-201ENST00000230480 LRRC59Q96AG4 307 aaKnown RBP19.66■□□□□ 0.74
VEGFA-201ENST00000230480 NUDT16Q96DE0 195 aaKnown RBP19.66■□□□□ 0.74
VEGFA-201ENST00000230480 PMFBP1Q8TBY8 1022 aa19.65■□□□□ 0.74
VEGFA-201ENST00000230480 COL22A1Q8NFW1 1626 aaPredicted RBP19.65■□□□□ 0.74
VEGFA-201ENST00000230480 TRPM3Q9HCF6 1732 aaPredicted RBP19.65■□□□□ 0.74
VEGFA-201ENST00000230480 TIMELESSQ9UNS1 1208 aa19.64■□□□□ 0.73
VEGFA-201ENST00000230480 NPHP3Q7Z494 1330 aa19.64■□□□□ 0.73
VEGFA-201ENST00000230480 CARD11Q9BXL7 1154 aa19.63■□□□□ 0.73
VEGFA-201ENST00000230480 SPATA31A6Q5VVP1 1343 aa19.62■□□□□ 0.73
VEGFA-201ENST00000230480 KRT28Q7Z3Y7 464 aa19.62■□□□□ 0.73
VEGFA-201ENST00000230480 CCER1Q8TC90 406 aaPredicted RBP19.62■□□□□ 0.73
VEGFA-201ENST00000230480 CABP2Q9NPB3 220 aa19.62■□□□□ 0.73
VEGFA-201ENST00000230480 SPATA31A3Q5VYP0 1347 aa19.61■□□□□ 0.73
VEGFA-201ENST00000230480 TESK2Q96S53 571 aa19.61■□□□□ 0.73
VEGFA-201ENST00000230480 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
VEGFA-201ENST00000230480 PLEKHG3A1L390 1219 aa19.6■□□□□ 0.73
VEGFA-201ENST00000230480 SBNO2Q9Y2G9 1366 aa19.59■□□□□ 0.73
VEGFA-201ENST00000230480 ITSN1Q15811 1721 aa19.59■□□□□ 0.73
VEGFA-201ENST00000230480 ALS2Q96Q42 1657 aa19.59■□□□□ 0.73
VEGFA-201ENST00000230480 POLR3AO14802 1390 aaPredicted RBP19.58■□□□□ 0.73
VEGFA-201ENST00000230480 CCDC61Q9Y6R9 512 aa19.57■□□□□ 0.72
VEGFA-201ENST00000230480 SBNO1A3KN83 1393 aa19.57■□□□□ 0.72
VEGFA-201ENST00000230480 EIF3AQ14152 1382 aaKnown RBP19.57■□□□□ 0.72
VEGFA-201ENST00000230480 POTEAQ6S8J7 498 aa19.56■□□□□ 0.72
VEGFA-201ENST00000230480 NUTM2BA6NNL0 878 aaPredicted RBP19.55■□□□□ 0.72
VEGFA-201ENST00000230480 NUTM2EB1AL46 878 aaPredicted RBP19.55■□□□□ 0.72
VEGFA-201ENST00000230480 NUTM2AQ8IVF1 878 aaPredicted RBP19.55■□□□□ 0.72
VEGFA-201ENST00000230480 ACEP12821 1306 aa19.54■□□□□ 0.72
VEGFA-201ENST00000230480 TNS3Q68CZ2 1445 aa19.54■□□□□ 0.72
VEGFA-201ENST00000230480 ST20-MTHFSA0A0A6YYL1 179 aa19.54■□□□□ 0.72
VEGFA-201ENST00000230480 CRYBG1Q9Y4K1 1723 aa19.54■□□□□ 0.72
VEGFA-201ENST00000230480 PSME1Q06323 249 aa19.53■□□□□ 0.72
VEGFA-201ENST00000230480 ABCA3Q99758 1704 aa19.53■□□□□ 0.72
VEGFA-201ENST00000230480 PPIP5K1Q6PFW1 1433 aa19.52■□□□□ 0.72
VEGFA-201ENST00000230480 SRPK2P78362 688 aaKnown RBP19.52■□□□□ 0.72
VEGFA-201ENST00000230480 CABP1Q9NZU7 370 aa19.52■□□□□ 0.72
VEGFA-201ENST00000230480 EVC2Q86UK5 1308 aa19.51■□□□□ 0.71
VEGFA-201ENST00000230480 SSH2Q76I76 1423 aa19.51■□□□□ 0.71
VEGFA-201ENST00000230480 MARF1Q9Y4F3 1742 aaKnown RBP19.51■□□□□ 0.71
VEGFA-201ENST00000230480 CABLES1Q8TDN4 633 aa19.51■□□□□ 0.71
VEGFA-201ENST00000230480 CD163L1Q9NR16 1453 aa19.49■□□□□ 0.71
VEGFA-201ENST00000230480 NGDNQ8NEJ9 315 aaKnown RBP19.49■□□□□ 0.71
VEGFA-201ENST00000230480 USP47Q96K76 1375 aa19.48■□□□□ 0.71
VEGFA-201ENST00000230480 AKAP12Q02952 1782 aa19.48■□□□□ 0.71
VEGFA-201ENST00000230480 ADAMTS2O95450 1211 aa19.48■□□□□ 0.71
VEGFA-201ENST00000230480 CPSF1Q10570 1443 aaKnown RBP19.47■□□□□ 0.71
VEGFA-201ENST00000230480 AFF2P51816 1311 aa19.45■□□□□ 0.7
VEGFA-201ENST00000230480 USP6P35125 1406 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms