RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 DRC7Q8IY82 874 aa17.91■□□□□ 0.46
PRDM4-201ENST00000228437 CHMP3Q9Y3E7 222 aa17.91■□□□□ 0.46
PRDM4-201ENST00000228437 CBX1P83916 185 aa17.91■□□□□ 0.46
PRDM4-201ENST00000228437 CDK11BP21127 795 aaKnown RBP17.9■□□□□ 0.46
PRDM4-201ENST00000228437 TCOF1Q13428 1488 aaKnown RBP17.9■□□□□ 0.46
PRDM4-201ENST00000228437 PLEKHH2Q8IVE3 1493 aa17.9■□□□□ 0.46
PRDM4-201ENST00000228437 MAPK8IP2Q13387 824 aaPredicted RBP17.9■□□□□ 0.46
PRDM4-201ENST00000228437 SLC4A10Q6U841 1118 aa17.89■□□□□ 0.45
PRDM4-201ENST00000228437 ISY1Q9ULR0 285 aaKnown RBP17.89■□□□□ 0.45
PRDM4-201ENST00000228437 BAG4O95429 457 aaKnown RBP17.89■□□□□ 0.45
PRDM4-201ENST00000228437 GAS2L2Q8NHY3 880 aa17.89■□□□□ 0.45
PRDM4-201ENST00000228437 TRIM6-TRIM34B2RNG4 842 aa17.88■□□□□ 0.45
PRDM4-201ENST00000228437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.88■□□□□ 0.45
PRDM4-201ENST00000228437 TROQ12816 1431 aaPredicted RBP17.88■□□□□ 0.45
PRDM4-201ENST00000228437 NUCB2P80303 420 aa17.88■□□□□ 0.45
PRDM4-201ENST00000228437 HMOX1P09601 288 aa17.88■□□□□ 0.45
PRDM4-201ENST00000228437 GGT6Q6P531 493 aa17.88■□□□□ 0.45
PRDM4-201ENST00000228437 NPM1P06748 294 aaKnown RBP eCLIP17.87■□□□□ 0.45
PRDM4-201ENST00000228437 CHAMP1Q96JM3 812 aa17.87■□□□□ 0.45
PRDM4-201ENST00000228437 ZNF830Q96NB3 372 aaPredicted RBP17.87■□□□□ 0.45
PRDM4-201ENST00000228437 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.87■□□□□ 0.45
PRDM4-201ENST00000228437 STAG3Q9UJ98 1225 aa17.87■□□□□ 0.45
PRDM4-201ENST00000228437 THUMPD2Q9BTF0 503 aaKnown RBP17.87■□□□□ 0.45
PRDM4-201ENST00000228437 IGSF3O75054 1194 aa17.87■□□□□ 0.45
PRDM4-201ENST00000228437 TSC1Q92574 1164 aa17.87■□□□□ 0.45
PRDM4-201ENST00000228437 CSPP1Q1MSJ5 1256 aa17.86■□□□□ 0.45
PRDM4-201ENST00000228437 NGEFQ8N5V2 710 aa17.86■□□□□ 0.45
PRDM4-201ENST00000228437 BLMP54132 1417 aaPredicted RBP17.86■□□□□ 0.45
PRDM4-201ENST00000228437 TAOK2Q9UL54 1235 aa17.85■□□□□ 0.45
PRDM4-201ENST00000228437 ZMYM4Q5VZL5 1548 aa17.85■□□□□ 0.45
PRDM4-201ENST00000228437 CDC45O75419 566 aa17.85■□□□□ 0.45
PRDM4-201ENST00000228437 RILPL2Q969X0 211 aa17.85■□□□□ 0.45
PRDM4-201ENST00000228437 GDPD2Q9HCC8 539 aa17.85■□□□□ 0.45
PRDM4-201ENST00000228437 CIZ1Q9ULV3 898 aaPredicted RBP17.85■□□□□ 0.45
PRDM4-201ENST00000228437 CABP2Q9NPB3 220 aa17.85■□□□□ 0.45
PRDM4-201ENST00000228437 PRIM1P49642 420 aaKnown RBP17.84■□□□□ 0.45
PRDM4-201ENST00000228437 MAP7D2Q96T17 732 aa17.84■□□□□ 0.45
PRDM4-201ENST00000228437 NEK4P51957 841 aa17.83■□□□□ 0.45
PRDM4-201ENST00000228437 TBC1D9Q6ZT07 1266 aa17.83■□□□□ 0.45
PRDM4-201ENST00000228437 CHMP4BQ9H444 224 aaKnown RBP17.83■□□□□ 0.45
PRDM4-201ENST00000228437 KIAA0586Q9BVV6 1533 aa17.83■□□□□ 0.45
PRDM4-201ENST00000228437 ZNF771Q7L3S4 317 aaPredicted RBP17.83■□□□□ 0.45
PRDM4-201ENST00000228437 CARMIL2Q6F5E8 1435 aa17.83■□□□□ 0.45
PRDM4-201ENST00000228437 PLB1Q6P1J6 1458 aa17.83■□□□□ 0.44
PRDM4-201ENST00000228437 WDR63Q8IWG1 891 aa17.83■□□□□ 0.44
PRDM4-201ENST00000228437 SYAP1Q96A49 352 aaPredicted RBP17.83■□□□□ 0.44
PRDM4-201ENST00000228437 CCDC39Q9UFE4 941 aa17.83■□□□□ 0.44
PRDM4-201ENST00000228437 PRAG1Q86YV5 1406 aa17.83■□□□□ 0.44
PRDM4-201ENST00000228437 AAMPQ13685 434 aa17.83■□□□□ 0.44
PRDM4-201ENST00000228437 OFD1O75665 1012 aa17.82■□□□□ 0.44
PRDM4-201ENST00000228437 ZSCAN23Q3MJ62 389 aa17.82■□□□□ 0.44
PRDM4-201ENST00000228437 KIF16BQ96L93 1317 aa17.82■□□□□ 0.44
PRDM4-201ENST00000228437 SPDYE4A6NLX3 237 aa17.82■□□□□ 0.44
PRDM4-201ENST00000228437 SPC24Q8NBT2 197 aa17.81■□□□□ 0.44
PRDM4-201ENST00000228437 CARD14Q9BXL6 1004 aa17.81■□□□□ 0.44
PRDM4-201ENST00000228437 CD2BP2O95400 341 aaKnown RBP17.81■□□□□ 0.44
PRDM4-201ENST00000228437 RAB3GAP1Q15042 981 aa17.81■□□□□ 0.44
PRDM4-201ENST00000228437 DNMBPQ6XZF7 1577 aa17.8■□□□□ 0.44
PRDM4-201ENST00000228437 ARHGEF11O15085 1522 aa17.8■□□□□ 0.44
PRDM4-201ENST00000228437 AFAP1Q8N556 730 aa17.8■□□□□ 0.44
PRDM4-201ENST00000228437 ZNF592Q92610 1267 aa17.8■□□□□ 0.44
PRDM4-201ENST00000228437 RBSNQ9H1K0 784 aa17.8■□□□□ 0.44
PRDM4-201ENST00000228437 ANO2Q9NQ90 1003 aa17.8■□□□□ 0.44
PRDM4-201ENST00000228437 KDM5CP41229 1560 aa17.79■□□□□ 0.44
PRDM4-201ENST00000228437 KLHL40Q2TBA0 621 aa17.79■□□□□ 0.44
PRDM4-201ENST00000228437 ZNF521Q96K83 1311 aa17.79■□□□□ 0.44
PRDM4-201ENST00000228437 NINLQ9Y2I6 1382 aa17.79■□□□□ 0.44
PRDM4-201ENST00000228437 CCDC27Q2M243 656 aa17.79■□□□□ 0.44
PRDM4-201ENST00000228437 RSPH4AQ5TD94 716 aa17.79■□□□□ 0.44
PRDM4-201ENST00000228437 SPAG9O60271 1321 aaKnown RBP17.79■□□□□ 0.44
PRDM4-201ENST00000228437 SMARCA5O60264 1052 aaPredicted RBP17.78■□□□□ 0.44
PRDM4-201ENST00000228437 MCCP23508 829 aa17.78■□□□□ 0.44
PRDM4-201ENST00000228437 ZGPATQ8N5A5 531 aaKnown RBP17.77■□□□□ 0.44
PRDM4-201ENST00000228437 GPATCH8Q9UKJ3 1502 aaKnown RBP17.77■□□□□ 0.44
PRDM4-201ENST00000228437 RABEP1Q15276 862 aa17.77■□□□□ 0.44
PRDM4-201ENST00000228437 EFCAB2Q5VUJ9 269 aa17.77■□□□□ 0.43
PRDM4-201ENST00000228437 GPRASP1Q5JY77 1395 aa17.77■□□□□ 0.43
PRDM4-201ENST00000228437 MINK1Q8N4C8 1332 aaPredicted RBP17.76■□□□□ 0.43
PRDM4-201ENST00000228437 GOLGA6L4A6NEF3 574 aa17.76■□□□□ 0.43
PRDM4-201ENST00000228437 UHRF1BP1Q6BDS2 1440 aa17.76■□□□□ 0.43
PRDM4-201ENST00000228437 TMPOP42166 694 aaKnown RBP17.76■□□□□ 0.43
PRDM4-201ENST00000228437 PKP1Q13835 747 aa17.76■□□□□ 0.43
PRDM4-201ENST00000228437 INTS3Q68E01 1043 aaKnown RBP17.76■□□□□ 0.43
PRDM4-201ENST00000228437 C17orf53Q8N3J3 647 aaPredicted RBP17.76■□□□□ 0.43
PRDM4-201ENST00000228437 TSPY26PQ9H489 355 aa17.76■□□□□ 0.43
PRDM4-201ENST00000228437 NSD3Q9BZ95 1437 aa17.76■□□□□ 0.43
PRDM4-201ENST00000228437 FBLN1P23142 703 aa17.76■□□□□ 0.43
PRDM4-201ENST00000228437 SMC5Q8IY18 1101 aa17.76■□□□□ 0.43
PRDM4-201ENST00000228437 USP25Q9UHP3 1055 aa17.75■□□□□ 0.43
PRDM4-201ENST00000228437 DIAPH1O60610 1272 aaKnown RBP17.75■□□□□ 0.43
PRDM4-201ENST00000228437 GCC2Q8IWJ2 1684 aa17.75■□□□□ 0.43
PRDM4-201ENST00000228437 CUL7Q14999 1698 aa17.75■□□□□ 0.43
PRDM4-201ENST00000228437 C16orf71Q8IYS4 520 aaPredicted RBP17.74■□□□□ 0.43
PRDM4-201ENST00000228437 KIF14Q15058 1648 aa17.74■□□□□ 0.43
PRDM4-201ENST00000228437 DTNBO60941 627 aa17.74■□□□□ 0.43
PRDM4-201ENST00000228437 LARP6Q9BRS8 491 aaKnown RBP17.74■□□□□ 0.43
PRDM4-201ENST00000228437 KANK1Q14678 1352 aa17.74■□□□□ 0.43
PRDM4-201ENST00000228437 PRKAR2BP31323 418 aa17.74■□□□□ 0.43
PRDM4-201ENST00000228437 KCNJ4P48050 445 aa17.74■□□□□ 0.43
PRDM4-201ENST00000228437 SASS6Q6UVJ0 657 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms