RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 CHD2O14647 1828 aaKnown RBP15.49■□□□□ 0.07
CTSC-201ENST00000227266 SLC24A1O60721 1099 aa15.49■□□□□ 0.07
CTSC-201ENST00000227266 NWD1Q149M9 1564 aa15.48■□□□□ 0.07
CTSC-201ENST00000227266 C14orf37Q86TY3 774 aa15.48■□□□□ 0.07
CTSC-201ENST00000227266 KIF7Q2M1P5 1343 aa15.47■□□□□ 0.07
CTSC-201ENST00000227266 WASHC2AQ641Q2 1341 aa15.47■□□□□ 0.07
CTSC-201ENST00000227266 QRICH2Q9H0J4 1663 aa15.47■□□□□ 0.07
CTSC-201ENST00000227266 EVC2Q86UK5 1308 aa15.47■□□□□ 0.07
CTSC-201ENST00000227266 NKTRP30414 1462 aaKnown RBP15.46■□□□□ 0.07
CTSC-201ENST00000227266 CCDC7Q96M83 1385 aa15.46■□□□□ 0.07
CTSC-201ENST00000227266 SRPK2P78362 688 aaKnown RBP15.45■□□□□ 0.06
CTSC-201ENST00000227266 CDCA8Q53HL2 280 aa15.45■□□□□ 0.06
CTSC-201ENST00000227266 TMEM94Q12767 1356 aa15.45■□□□□ 0.06
CTSC-201ENST00000227266 CDK19Q9BWU1 502 aa15.45■□□□□ 0.06
CTSC-201ENST00000227266 CABP2Q9NPB3 220 aa15.44■□□□□ 0.06
CTSC-201ENST00000227266 TULP4Q9NRJ4 1543 aa15.43■□□□□ 0.06
CTSC-201ENST00000227266 WASLO00401 505 aaPredicted RBP15.43■□□□□ 0.06
CTSC-201ENST00000227266 STRCP1A6NGW2 1772 aa15.42■□□□□ 0.06
CTSC-201ENST00000227266 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.42■□□□□ 0.06
CTSC-201ENST00000227266 ADGRL3Q9HAR2 1447 aa15.41■□□□□ 0.06
CTSC-201ENST00000227266 NUTM2FA1L443 756 aa15.41■□□□□ 0.06
CTSC-201ENST00000227266 DDX10Q13206 875 aaKnown RBP15.41■□□□□ 0.06
CTSC-201ENST00000227266 LRRC7Q96NW7 1537 aa15.39■□□□□ 0.05
CTSC-201ENST00000227266 TMC1Q8TDI8 760 aa15.39■□□□□ 0.05
CTSC-201ENST00000227266 C19orf44Q9H6X5 657 aa15.39■□□□□ 0.05
CTSC-201ENST00000227266 DIEXFQ68CQ4 756 aaKnown RBP15.38■□□□□ 0.05
CTSC-201ENST00000227266 ADGRB2O60241 1585 aa15.38■□□□□ 0.05
CTSC-201ENST00000227266 PUS7Q96PZ0 661 aaKnown RBP15.37■□□□□ 0.05
CTSC-201ENST00000227266 NCOA3Q9Y6Q9 1424 aa15.37■□□□□ 0.05
CTSC-201ENST00000227266 ATAD2Q6PL18 1390 aa15.37■□□□□ 0.05
CTSC-201ENST00000227266 NUDT16Q96DE0 195 aaKnown RBP15.37■□□□□ 0.05
CTSC-201ENST00000227266 MSH6P52701 1360 aa15.36■□□□□ 0.05
CTSC-201ENST00000227266 ATF3P18847 181 aa15.36■□□□□ 0.05
CTSC-201ENST00000227266 NALCNQ8IZF0 1738 aa15.36■□□□□ 0.05
CTSC-201ENST00000227266 PRR36Q9H6K5 1346 aa15.35■□□□□ 0.05
CTSC-201ENST00000227266 SLC12A5Q9H2X9 1139 aa15.35■□□□□ 0.05
CTSC-201ENST00000227266 CDC42BPGQ6DT37 1551 aa15.34■□□□□ 0.05
CTSC-201ENST00000227266 CABP1Q9NZU7 370 aa15.34■□□□□ 0.05
CTSC-201ENST00000227266 CCDC61Q9Y6R9 512 aa15.34■□□□□ 0.05
CTSC-201ENST00000227266 LTBP4Q8N2S1 1624 aa15.34■□□□□ 0.05
CTSC-201ENST00000227266 ATP7BP35670 1465 aa15.33■□□□□ 0.04
CTSC-201ENST00000227266 CADPS2Q86UW7 1296 aa15.33■□□□□ 0.04
CTSC-201ENST00000227266 PANK3Q9H999 370 aa15.32■□□□□ 0.04
CTSC-201ENST00000227266 PPIP5K1Q6PFW1 1433 aa15.31■□□□□ 0.04
CTSC-201ENST00000227266 DCCP43146 1447 aa15.31■□□□□ 0.04
CTSC-201ENST00000227266 ANKARQ7Z5J8 1434 aa15.31■□□□□ 0.04
CTSC-201ENST00000227266 NINLQ9Y2I6 1382 aa15.3■□□□□ 0.04
CTSC-201ENST00000227266 ESCO1Q5FWF5 840 aa15.29■□□□□ 0.04
CTSC-201ENST00000227266 PMFBP1Q8TBY8 1022 aa15.29■□□□□ 0.04
CTSC-201ENST00000227266 TERF2IPQ9NYB0 399 aa15.28■□□□□ 0.04
CTSC-201ENST00000227266 XIRP1Q702N8 1843 aaKnown RBP15.28■□□□□ 0.04
CTSC-201ENST00000227266 FMN2Q9NZ56 1722 aa15.28■□□□□ 0.04
CTSC-201ENST00000227266 HDGFL2Q7Z4V5 671 aaPredicted RBP15.27■□□□□ 0.04
CTSC-201ENST00000227266 ORAI2Q96SN7 254 aa15.27■□□□□ 0.04
CTSC-201ENST00000227266 MST1RQ04912 1400 aa15.27■□□□□ 0.04
CTSC-201ENST00000227266 C1orf167Q5SNV9 1468 aa15.27■□□□□ 0.03
CTSC-201ENST00000227266 USP32Q8NFA0 1604 aa15.27■□□□□ 0.03
CTSC-201ENST00000227266 PLEKHG3A1L390 1219 aa15.27■□□□□ 0.03
CTSC-201ENST00000227266 NGDNQ8NEJ9 315 aaKnown RBP15.27■□□□□ 0.03
CTSC-201ENST00000227266 PHF8Q9UPP1 1060 aa15.27■□□□□ 0.03
CTSC-201ENST00000227266 MYOM1P52179 1685 aa15.27■□□□□ 0.03
CTSC-201ENST00000227266 A0A1W2PP64 1363 aa15.26■□□□□ 0.03
CTSC-201ENST00000227266 ANKRD36BQ8N2N9 1353 aa15.26■□□□□ 0.03
CTSC-201ENST00000227266 SLAIN2Q9P270 581 aa15.26■□□□□ 0.03
CTSC-201ENST00000227266 ACEP12821 1306 aa15.26■□□□□ 0.03
CTSC-201ENST00000227266 CNGB1Q14028 1251 aaPredicted RBP15.25■□□□□ 0.03
CTSC-201ENST00000227266 CARD14Q9BXL6 1004 aa15.25■□□□□ 0.03
CTSC-201ENST00000227266 KNSTRNQ9Y448 316 aa15.25■□□□□ 0.03
CTSC-201ENST00000227266 CD163L1Q9NR16 1453 aa15.24■□□□□ 0.03
CTSC-201ENST00000227266 PER1O15534 1290 aaPredicted RBP15.23■□□□□ 0.03
CTSC-201ENST00000227266 KTN1Q86UP2 1357 aaKnown RBP15.23■□□□□ 0.03
CTSC-201ENST00000227266 NSD3Q9BZ95 1437 aa15.23■□□□□ 0.03
CTSC-201ENST00000227266 TOPAZ1Q8N9V7 1692 aa15.23■□□□□ 0.03
CTSC-201ENST00000227266 FOXO3O43524 673 aa15.22■□□□□ 0.03
CTSC-201ENST00000227266 CERKQ8TCT0 537 aa15.22■□□□□ 0.03
CTSC-201ENST00000227266 ZNF692Q9BU19 519 aaPredicted RBP15.22■□□□□ 0.03
CTSC-201ENST00000227266 CPSF1Q10570 1443 aaKnown RBP15.22■□□□□ 0.03
CTSC-201ENST00000227266 POLR3AO14802 1390 aaPredicted RBP15.21■□□□□ 0.03
CTSC-201ENST00000227266 BRINP3Q76B58 766 aa15.21■□□□□ 0.02
CTSC-201ENST00000227266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.21■□□□□ 0.02
CTSC-201ENST00000227266 RGPD8O14715 1765 aaPredicted RBP15.2■□□□□ 0.02
CTSC-201ENST00000227266 XPCQ01831 940 aaPredicted RBP15.2■□□□□ 0.02
CTSC-201ENST00000227266 PSME1Q06323 249 aa15.2■□□□□ 0.02
CTSC-201ENST00000227266 ITSN1Q15811 1721 aa15.2■□□□□ 0.02
CTSC-201ENST00000227266 CC2D1BQ5T0F9 858 aaKnown RBP15.19■□□□□ 0.02
CTSC-201ENST00000227266 UBAP1LF5GYI3 381 aa15.19■□□□□ 0.02
CTSC-201ENST00000227266 TOM1O60784 492 aa15.19■□□□□ 0.02
CTSC-201ENST00000227266 DDX17Q92841 729 aaKnown RBP15.19■□□□□ 0.02
CTSC-201ENST00000227266 USP6P35125 1406 aa15.18■□□□□ 0.02
CTSC-201ENST00000227266 CGNL1Q0VF96 1302 aa15.18■□□□□ 0.02
CTSC-201ENST00000227266 AMER1Q5JTC6 1135 aaPredicted RBP15.18■□□□□ 0.02
CTSC-201ENST00000227266 EDC4Q6P2E9 1401 aaKnown RBP15.18■□□□□ 0.02
CTSC-201ENST00000227266 ANP32CO43423 234 aa15.17■□□□□ 0.02
CTSC-201ENST00000227266 PAK3O75914 559 aaPredicted RBP15.17■□□□□ 0.02
CTSC-201ENST00000227266 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
CTSC-201ENST00000227266 PIP4K2BP78356 416 aa15.17■□□□□ 0.02
CTSC-201ENST00000227266 TTC21BQ7Z4L5 1316 aa15.16■□□□□ 0.02
CTSC-201ENST00000227266 KRT28Q7Z3Y7 464 aa15.16■□□□□ 0.02
CTSC-201ENST00000227266 NPHP3Q7Z494 1330 aa15.16■□□□□ 0.02
CTSC-201ENST00000227266 NME9Q86XW9 330 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms