RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 FOXD4L5Q5VV16 416 aaPredicted RBP18.09■□□□□ 0.49
SFXN3-201ENST00000224807 FOXD4L4Q8WXT5 416 aaPredicted RBP18.09■□□□□ 0.49
SFXN3-201ENST00000224807 GAS2L3Q86XJ1 694 aa18.09■□□□□ 0.49
SFXN3-201ENST00000224807 TRAK1Q9UPV9 953 aa18.09■□□□□ 0.49
SFXN3-201ENST00000224807 IQGAP1P46940 1657 aa18.09■□□□□ 0.49
SFXN3-201ENST00000224807 ASXL1Q8IXJ9 1541 aa18.09■□□□□ 0.49
SFXN3-201ENST00000224807 CARD14Q9BXL6 1004 aa18.08■□□□□ 0.49
SFXN3-201ENST00000224807 SLC12A5Q9H2X9 1139 aa18.08■□□□□ 0.49
SFXN3-201ENST00000224807 SYNMO15061 1565 aa18.08■□□□□ 0.49
SFXN3-201ENST00000224807 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.48
SFXN3-201ENST00000224807 ARHGAP5Q13017 1502 aa18.07■□□□□ 0.48
SFXN3-201ENST00000224807 CDCA8Q53HL2 280 aa18.07■□□□□ 0.48
SFXN3-201ENST00000224807 C1orf115Q9H7X2 142 aa18.07■□□□□ 0.48
SFXN3-201ENST00000224807 MRE11P49959 708 aa18.07■□□□□ 0.48
SFXN3-201ENST00000224807 PLXNC1O60486 1568 aa18.07■□□□□ 0.48
SFXN3-201ENST00000224807 CLCN1P35523 988 aa18.07■□□□□ 0.48
SFXN3-201ENST00000224807 MADDQ8WXG6 1647 aa18.07■□□□□ 0.48
SFXN3-201ENST00000224807 TTC37Q6PGP7 1564 aa18.06■□□□□ 0.48
SFXN3-201ENST00000224807 ELL2O00472 640 aaPredicted RBP18.06■□□□□ 0.48
SFXN3-201ENST00000224807 MPNDQ8N594 471 aa18.06■□□□□ 0.48
SFXN3-201ENST00000224807 VIRMAQ69YN4 1812 aaKnown RBP18.06■□□□□ 0.48
SFXN3-201ENST00000224807 APBB1O00213 710 aa18.06■□□□□ 0.48
SFXN3-201ENST00000224807 MTHFSP49914 203 aa18.05■□□□□ 0.48
SFXN3-201ENST00000224807 ABCC2Q92887 1545 aa18.05■□□□□ 0.48
SFXN3-201ENST00000224807 TNPO1Q92973 898 aaKnown RBP18.04■□□□□ 0.48
SFXN3-201ENST00000224807 FAM13BQ9NYF5 915 aa18.04■□□□□ 0.48
SFXN3-201ENST00000224807 MYOM1P52179 1685 aa18.04■□□□□ 0.48
SFXN3-201ENST00000224807 DZIP1LQ8IYY4 767 aaKnown RBP18.03■□□□□ 0.48
SFXN3-201ENST00000224807 DUOX2Q9NRD8 1548 aa18.03■□□□□ 0.48
SFXN3-201ENST00000224807 ERCC6Q03468 1493 aa18.03■□□□□ 0.48
SFXN3-201ENST00000224807 EXOSC9Q06265 439 aaKnown RBP18.02■□□□□ 0.48
SFXN3-201ENST00000224807 TMEM132EQ6IEE7 984 aa18.02■□□□□ 0.48
SFXN3-201ENST00000224807 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.02■□□□□ 0.48
SFXN3-201ENST00000224807 SCAF11Q99590 1463 aaKnown RBP18.02■□□□□ 0.47
SFXN3-201ENST00000224807 NPC1L1Q9UHC9 1359 aa18.02■□□□□ 0.47
SFXN3-201ENST00000224807 FOXD4L6Q3SYB3 417 aaPredicted RBP18.02■□□□□ 0.47
SFXN3-201ENST00000224807 FOXD4L3Q6VB84 417 aaPredicted RBP18.02■□□□□ 0.47
SFXN3-201ENST00000224807 KIAA1211Q6ZU35 1233 aa18.02■□□□□ 0.47
SFXN3-201ENST00000224807 ZKSCAN2Q63HK3 967 aa18.01■□□□□ 0.47
SFXN3-201ENST00000224807 FSD2A1L4K1 749 aa18■□□□□ 0.47
SFXN3-201ENST00000224807 ANP32BQ92688 251 aaKnown RBP18■□□□□ 0.47
SFXN3-201ENST00000224807 DDX49Q9Y6V7 483 aaKnown RBP18■□□□□ 0.47
SFXN3-201ENST00000224807 CHAMP1Q96JM3 812 aa18■□□□□ 0.47
SFXN3-201ENST00000224807 SSFA2P28290 1259 aa17.99■□□□□ 0.47
SFXN3-201ENST00000224807 MVPQ14764 893 aaKnown RBP17.99■□□□□ 0.47
SFXN3-201ENST00000224807 ANKRD45Q5TZF3 282 aa17.99■□□□□ 0.47
SFXN3-201ENST00000224807 CD2BP2O95400 341 aaKnown RBP17.99■□□□□ 0.47
SFXN3-201ENST00000224807 DDX11L8A8MPP1 907 aa17.98■□□□□ 0.47
SFXN3-201ENST00000224807 RUNDC1Q96C34 613 aa17.98■□□□□ 0.47
SFXN3-201ENST00000224807 R3HCC1Q9Y3T6 440 aaKnown RBP17.98■□□□□ 0.47
SFXN3-201ENST00000224807 NLRP1Q9C000 1473 aa17.98■□□□□ 0.47
SFXN3-201ENST00000224807 SPHKAPQ2M3C7 1700 aa17.97■□□□□ 0.47
SFXN3-201ENST00000224807 NOB1Q9ULX3 412 aaKnown RBP17.97■□□□□ 0.47
SFXN3-201ENST00000224807 AFAP1Q8N556 730 aa17.97■□□□□ 0.47
SFXN3-201ENST00000224807 SCAPERQ9BY12 1400 aa17.97■□□□□ 0.47
SFXN3-201ENST00000224807 MSNP26038 577 aaKnown RBP17.97■□□□□ 0.47
SFXN3-201ENST00000224807 RRP9O43818 475 aaKnown RBP17.96■□□□□ 0.47
SFXN3-201ENST00000224807 TRIM27P14373 513 aa17.96■□□□□ 0.47
SFXN3-201ENST00000224807 TMEM57Q8N5G2 664 aa17.96■□□□□ 0.47
SFXN3-201ENST00000224807 NASPP49321 788 aaPredicted RBP17.95■□□□□ 0.46
SFXN3-201ENST00000224807 SSH1Q8WYL5 1049 aa17.95■□□□□ 0.46
SFXN3-201ENST00000224807 GBP4Q96PP9 640 aa17.95■□□□□ 0.46
SFXN3-201ENST00000224807 NOL8Q76FK4 1167 aaKnown RBP17.95■□□□□ 0.46
SFXN3-201ENST00000224807 MCTP1Q6DN14 999 aa17.94■□□□□ 0.46
SFXN3-201ENST00000224807 CAVIN1Q6NZI2 390 aaKnown RBP17.94■□□□□ 0.46
SFXN3-201ENST00000224807 KDM5AP29375 1690 aaKnown RBP17.94■□□□□ 0.46
SFXN3-201ENST00000224807 XPCQ01831 940 aaPredicted RBP17.93■□□□□ 0.46
SFXN3-201ENST00000224807 RNF214Q8ND24 703 aa17.93■□□□□ 0.46
SFXN3-201ENST00000224807 CFAP53Q96M91 514 aa17.93■□□□□ 0.46
SFXN3-201ENST00000224807 ADGRF5Q8IZF2 1346 aa17.93■□□□□ 0.46
SFXN3-201ENST00000224807 TRPM2O94759 1503 aa17.93■□□□□ 0.46
SFXN3-201ENST00000224807 FBLN1P23142 703 aa17.92■□□□□ 0.46
SFXN3-201ENST00000224807 NINLQ9Y2I6 1382 aa17.92■□□□□ 0.46
SFXN3-201ENST00000224807 KIF3BO15066 747 aa17.92■□□□□ 0.46
SFXN3-201ENST00000224807 STK26Q9P289 416 aa17.92■□□□□ 0.46
SFXN3-201ENST00000224807 CEP152O94986 1710 aa17.92■□□□□ 0.46
SFXN3-201ENST00000224807 PRDM10Q9NQV6 1147 aa17.92■□□□□ 0.46
SFXN3-201ENST00000224807 CLTCL1P53675 1640 aa17.92■□□□□ 0.46
SFXN3-201ENST00000224807 GGNBP2Q9H3C7 697 aa17.91■□□□□ 0.46
SFXN3-201ENST00000224807 NGEFQ8N5V2 710 aa17.9■□□□□ 0.46
SFXN3-201ENST00000224807 THUMPD2Q9BTF0 503 aaKnown RBP17.9■□□□□ 0.46
SFXN3-201ENST00000224807 GOLGA6L22H0YM25 854 aa17.9■□□□□ 0.46
SFXN3-201ENST00000224807 ERVK-7P63135 1459 aa17.9■□□□□ 0.46
SFXN3-201ENST00000224807 RBM27Q9P2N5 1060 aaKnown RBP17.89■□□□□ 0.45
SFXN3-201ENST00000224807 GAS2L2Q8NHY3 880 aa17.89■□□□□ 0.45
SFXN3-201ENST00000224807 PTPRTO14522 1441 aa17.88■□□□□ 0.45
SFXN3-201ENST00000224807 TRAPPC8Q9Y2L5 1435 aa17.88■□□□□ 0.45
SFXN3-201ENST00000224807 STAC3Q96MF2 364 aa17.87■□□□□ 0.45
SFXN3-201ENST00000224807 NSD3Q9BZ95 1437 aa17.87■□□□□ 0.45
SFXN3-201ENST00000224807 CABP2Q9NPB3 220 aa17.87■□□□□ 0.45
SFXN3-201ENST00000224807 POLR3AO14802 1390 aaPredicted RBP17.86■□□□□ 0.45
SFXN3-201ENST00000224807 PKP1Q13835 747 aa17.86■□□□□ 0.45
SFXN3-201ENST00000224807 A0A0U1RQG5 324 aaPredicted RBP17.86■□□□□ 0.45
SFXN3-201ENST00000224807 ATF7IPQ6VMQ6 1270 aa17.85■□□□□ 0.45
SFXN3-201ENST00000224807 RIPK4P57078 832 aa17.85■□□□□ 0.45
SFXN3-201ENST00000224807 DNTTIP2Q5QJE6 756 aaKnown RBP17.85■□□□□ 0.45
SFXN3-201ENST00000224807 DDX19BQ9UMR2 479 aa17.85■□□□□ 0.45
SFXN3-201ENST00000224807 KIAA1210Q9ULL0 1709 aa17.84■□□□□ 0.45
SFXN3-201ENST00000224807 ZNF692Q9BU19 519 aaPredicted RBP17.84■□□□□ 0.45
SFXN3-201ENST00000224807 PLCH2O75038 1416 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms