RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 RIPK4P57078 832 aa19.03■□□□□ 0.64
UBE2D4-201ENST00000222402 SPRYD3Q8NCJ5 442 aa19.02■□□□□ 0.64
UBE2D4-201ENST00000222402 RTN4Q9NQC3 1192 aaKnown RBP19.02■□□□□ 0.64
UBE2D4-201ENST00000222402 IPO8O15397 1037 aaKnown RBP19.02■□□□□ 0.64
UBE2D4-201ENST00000222402 ZMYM4Q5VZL5 1548 aa19.02■□□□□ 0.64
UBE2D4-201ENST00000222402 UHRF1BP1LA0JNW5 1464 aa19.02■□□□□ 0.63
UBE2D4-201ENST00000222402 FAM69CQ0P6D2 419 aa19.01■□□□□ 0.63
UBE2D4-201ENST00000222402 SLC52A1Q9NWF4 448 aa19.01■□□□□ 0.63
UBE2D4-201ENST00000222402 DZIP1LQ8IYY4 767 aaKnown RBP19.01■□□□□ 0.63
UBE2D4-201ENST00000222402 USP35Q9P2H5 1018 aa19.01■□□□□ 0.63
UBE2D4-201ENST00000222402 CFAP65Q6ZU64 1925 aaKnown RBP19.01■□□□□ 0.63
UBE2D4-201ENST00000222402 ZNF518AQ6AHZ1 1483 aa19.01■□□□□ 0.63
UBE2D4-201ENST00000222402 UGGT1Q9NYU2 1555 aa19■□□□□ 0.63
UBE2D4-201ENST00000222402 DMRT2Q9Y5R5 561 aa19■□□□□ 0.63
UBE2D4-201ENST00000222402 ELL2O00472 640 aaPredicted RBP18.99■□□□□ 0.63
UBE2D4-201ENST00000222402 WDR63Q8IWG1 891 aa18.99■□□□□ 0.63
UBE2D4-201ENST00000222402 INSRP06213 1382 aa18.99■□□□□ 0.63
UBE2D4-201ENST00000222402 EXOSC9Q06265 439 aaKnown RBP18.99■□□□□ 0.63
UBE2D4-201ENST00000222402 TRPM2O94759 1503 aa18.98■□□□□ 0.63
UBE2D4-201ENST00000222402 RARSP54136 660 aaKnown RBP18.98■□□□□ 0.63
UBE2D4-201ENST00000222402 NPC1L1Q9UHC9 1359 aa18.98■□□□□ 0.63
UBE2D4-201ENST00000222402 PTPRTO14522 1441 aa18.97■□□□□ 0.63
UBE2D4-201ENST00000222402 NUTM2FA1L443 756 aa18.97■□□□□ 0.63
UBE2D4-201ENST00000222402 CABP1Q9NZU7 370 aa18.97■□□□□ 0.63
UBE2D4-201ENST00000222402 MFAP1P55081 439 aaKnown RBP18.96■□□□□ 0.63
UBE2D4-201ENST00000222402 HMOX1P09601 288 aa18.96■□□□□ 0.63
UBE2D4-201ENST00000222402 ZFYVE16Q7Z3T8 1539 aa18.95■□□□□ 0.62
UBE2D4-201ENST00000222402 IGHDP01880 384 aa18.95■□□□□ 0.62
UBE2D4-201ENST00000222402 FBXO31Q5XUX0 539 aaPredicted RBP18.95■□□□□ 0.62
UBE2D4-201ENST00000222402 CDK19Q9BWU1 502 aa18.94■□□□□ 0.62
UBE2D4-201ENST00000222402 NFKBIBQ15653 356 aa18.94■□□□□ 0.62
UBE2D4-201ENST00000222402 POLR3AO14802 1390 aaPredicted RBP18.94■□□□□ 0.62
UBE2D4-201ENST00000222402 PDZRN3Q9UPQ7 1066 aa18.93■□□□□ 0.62
UBE2D4-201ENST00000222402 HDGFP51858 240 aaKnown RBP18.93■□□□□ 0.62
UBE2D4-201ENST00000222402 DDX19BQ9UMR2 479 aa18.92■□□□□ 0.62
UBE2D4-201ENST00000222402 CALD1Q05682 793 aaKnown RBP18.91■□□□□ 0.62
UBE2D4-201ENST00000222402 ERVK-7P63135 1459 aa18.91■□□□□ 0.62
UBE2D4-201ENST00000222402 TMPOP42166 694 aaKnown RBP18.91■□□□□ 0.62
UBE2D4-201ENST00000222402 NINLQ9Y2I6 1382 aa18.9■□□□□ 0.62
UBE2D4-201ENST00000222402 CLTCL1P53675 1640 aa18.9■□□□□ 0.62
UBE2D4-201ENST00000222402 CHMP4BQ9H444 224 aaKnown RBP18.9■□□□□ 0.62
UBE2D4-201ENST00000222402 PRKAR2BP31323 418 aa18.9■□□□□ 0.62
UBE2D4-201ENST00000222402 ZNF521Q96K83 1311 aa18.9■□□□□ 0.62
UBE2D4-201ENST00000222402 KDM2BQ8NHM5 1336 aa18.89■□□□□ 0.61
UBE2D4-201ENST00000222402 AAMPQ13685 434 aa18.89■□□□□ 0.61
UBE2D4-201ENST00000222402 TNNQ9UQP3 1299 aa18.89■□□□□ 0.61
UBE2D4-201ENST00000222402 NPATQ14207 1427 aa18.89■□□□□ 0.61
UBE2D4-201ENST00000222402 ATAD2Q6PL18 1390 aa18.89■□□□□ 0.61
UBE2D4-201ENST00000222402 C14orf37Q86TY3 774 aa18.88■□□□□ 0.61
UBE2D4-201ENST00000222402 COG3Q96JB2 828 aa18.88■□□□□ 0.61
UBE2D4-201ENST00000222402 E9PCH4 1651 aa18.88■□□□□ 0.61
UBE2D4-201ENST00000222402 MVPQ14764 893 aaKnown RBP18.88■□□□□ 0.61
UBE2D4-201ENST00000222402 WAPLQ7Z5K2 1190 aa18.88■□□□□ 0.61
UBE2D4-201ENST00000222402 SYNMO15061 1565 aa18.87■□□□□ 0.61
UBE2D4-201ENST00000222402 SHROOM2Q13796 1616 aa18.87■□□□□ 0.61
UBE2D4-201ENST00000222402 PLEKHG5O94827 1062 aa18.86■□□□□ 0.61
UBE2D4-201ENST00000222402 GSE1Q14687 1217 aa18.86■□□□□ 0.61
UBE2D4-201ENST00000222402 C8orf34Q49A92 452 aa18.86■□□□□ 0.61
UBE2D4-201ENST00000222402 NOB1Q9ULX3 412 aaKnown RBP18.86■□□□□ 0.61
UBE2D4-201ENST00000222402 KDM5AP29375 1690 aaKnown RBP18.86■□□□□ 0.61
UBE2D4-201ENST00000222402 MADDQ8WXG6 1647 aa18.86■□□□□ 0.61
UBE2D4-201ENST00000222402 HSCBQ8IWL3 235 aa18.86■□□□□ 0.61
UBE2D4-201ENST00000222402 ANKRD36BQ8N2N9 1353 aa18.86■□□□□ 0.61
UBE2D4-201ENST00000222402 KIF16BQ96L93 1317 aa18.85■□□□□ 0.61
UBE2D4-201ENST00000222402 TET3O43151 1660 aa18.85■□□□□ 0.61
UBE2D4-201ENST00000222402 FBLN1P23142 703 aa18.84■□□□□ 0.61
UBE2D4-201ENST00000222402 TXNDC2Q86VQ3 553 aa18.84■□□□□ 0.61
UBE2D4-201ENST00000222402 RLBP1P12271 317 aa18.84■□□□□ 0.61
UBE2D4-201ENST00000222402 APBB1O00213 710 aa18.84■□□□□ 0.61
UBE2D4-201ENST00000222402 SSH1Q8WYL5 1049 aa18.84■□□□□ 0.61
UBE2D4-201ENST00000222402 LNPKQ9C0E8 428 aa18.84■□□□□ 0.61
UBE2D4-201ENST00000222402 ATF7IPQ6VMQ6 1270 aa18.83■□□□□ 0.61
UBE2D4-201ENST00000222402 PCDHB15Q9Y5E8 787 aa18.83■□□□□ 0.61
UBE2D4-201ENST00000222402 FRAT2O75474 233 aaPredicted RBP18.83■□□□□ 0.61
UBE2D4-201ENST00000222402 SPHKAPQ2M3C7 1700 aa18.83■□□□□ 0.61
UBE2D4-201ENST00000222402 LAMC1P11047 1609 aa18.83■□□□□ 0.6
UBE2D4-201ENST00000222402 FYB1O15117 783 aa18.83■□□□□ 0.6
UBE2D4-201ENST00000222402 ANKRD45Q5TZF3 282 aa18.83■□□□□ 0.6
UBE2D4-201ENST00000222402 TRMT2AQ8IZ69 625 aaKnown RBP18.82■□□□□ 0.6
UBE2D4-201ENST00000222402 ZBTB7CA1YPR0 619 aa18.82■□□□□ 0.6
UBE2D4-201ENST00000222402 HSP90AB1P08238 724 aaKnown RBP18.82■□□□□ 0.6
UBE2D4-201ENST00000222402 SBNO2Q9Y2G9 1366 aa18.82■□□□□ 0.6
UBE2D4-201ENST00000222402 MYOM2P54296 1465 aa18.82■□□□□ 0.6
UBE2D4-201ENST00000222402 LMOD3Q0VAK6 560 aa18.82■□□□□ 0.6
UBE2D4-201ENST00000222402 NSD2O96028 1365 aa18.82■□□□□ 0.6
UBE2D4-201ENST00000222402 POGZQ7Z3K3 1410 aa18.81■□□□□ 0.6
UBE2D4-201ENST00000222402 THUMPD2Q9BTF0 503 aaKnown RBP18.81■□□□□ 0.6
UBE2D4-201ENST00000222402 ARAP3Q8WWN8 1544 aa18.8■□□□□ 0.6
UBE2D4-201ENST00000222402 CT47B1P0C2W7 299 aaPredicted RBP18.8■□□□□ 0.6
UBE2D4-201ENST00000222402 CLASP1Q7Z460 1538 aa18.79■□□□□ 0.6
UBE2D4-201ENST00000222402 A0A1W2PP64 1363 aa18.79■□□□□ 0.6
UBE2D4-201ENST00000222402 TRIM27P14373 513 aa18.78■□□□□ 0.6
UBE2D4-201ENST00000222402 GNAI1P63096 354 aa18.78■□□□□ 0.6
UBE2D4-201ENST00000222402 TMEM57Q8N5G2 664 aa18.78■□□□□ 0.6
UBE2D4-201ENST00000222402 GZF1Q9H116 711 aaPredicted RBP18.78■□□□□ 0.6
UBE2D4-201ENST00000222402 FCHSD2O94868 740 aa18.77■□□□□ 0.6
UBE2D4-201ENST00000222402 CCDC27Q2M243 656 aa18.77■□□□□ 0.6
UBE2D4-201ENST00000222402 KIF1BO60333 1816 aa18.77■□□□□ 0.6
UBE2D4-201ENST00000222402 RTF1Q92541 710 aaKnown RBP18.77■□□□□ 0.6
UBE2D4-201ENST00000222402 MAP3K4Q9Y6R4 1608 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms