RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 POGKQ9P215 609 aa23.52■■□□□ 1.36
GCDH-201ENST00000222214 CGNL1Q0VF96 1302 aa23.51■■□□□ 1.35
GCDH-201ENST00000222214 PRAM1Q96QH2 718 aa23.51■■□□□ 1.35
GCDH-201ENST00000222214 NLRP1Q9C000 1473 aa23.5■■□□□ 1.35
GCDH-201ENST00000222214 UBR1Q8IWV7 1749 aa23.5■■□□□ 1.35
GCDH-201ENST00000222214 ABCC11Q96J66 1382 aa23.49■■□□□ 1.35
GCDH-201ENST00000222214 RNF123Q5XPI4 1314 aa23.49■■□□□ 1.35
GCDH-201ENST00000222214 NRXN3Q9Y4C0 1643 aa23.49■■□□□ 1.35
GCDH-201ENST00000222214 ADAMTS8Q9UP79 889 aa23.49■■□□□ 1.35
GCDH-201ENST00000222214 POLR3AO14802 1390 aaPredicted RBP23.47■■□□□ 1.35
GCDH-201ENST00000222214 SRPK2P78362 688 aaKnown RBP23.47■■□□□ 1.35
GCDH-201ENST00000222214 MORC1Q86VD1 984 aa23.46■■□□□ 1.35
GCDH-201ENST00000222214 CABP2Q9NPB3 220 aa23.46■■□□□ 1.35
GCDH-201ENST00000222214 SAFB2Q14151 953 aaKnown RBP eCLIP23.45■■□□□ 1.35
GCDH-201ENST00000222214 TMEM2Q9UHN6 1383 aa23.45■■□□□ 1.34
GCDH-201ENST00000222214 KNDC1Q76NI1 1749 aa23.44■■□□□ 1.34
GCDH-201ENST00000222214 MINK1Q8N4C8 1332 aaPredicted RBP23.43■■□□□ 1.34
GCDH-201ENST00000222214 PPP4R2Q9NY27 417 aa23.43■■□□□ 1.34
GCDH-201ENST00000222214 SIRT1Q96EB6 747 aa23.42■■□□□ 1.34
GCDH-201ENST00000222214 TERF2IPQ9NYB0 399 aa23.42■■□□□ 1.34
GCDH-201ENST00000222214 NGEFQ8N5V2 710 aa23.41■■□□□ 1.34
GCDH-201ENST00000222214 TECPR2O15040 1411 aa23.41■■□□□ 1.34
GCDH-201ENST00000222214 IRX6P78412 446 aaPredicted RBP23.4■■□□□ 1.34
GCDH-201ENST00000222214 FER1L4A9Z1Z3 1794 aa23.4■■□□□ 1.34
GCDH-201ENST00000222214 C3P01024 1663 aa23.4■■□□□ 1.34
GCDH-201ENST00000222214 SENP3Q9H4L4 574 aaPredicted RBP23.4■■□□□ 1.34
GCDH-201ENST00000222214 A0A1W2PP64 1363 aa23.39■■□□□ 1.34
GCDH-201ENST00000222214 FAM135BQ49AJ0 1406 aa23.39■■□□□ 1.34
GCDH-201ENST00000222214 TRHP20396 242 aaPredicted RBP23.38■■□□□ 1.33
GCDH-201ENST00000222214 MED14O60244 1454 aa23.38■■□□□ 1.33
GCDH-201ENST00000222214 CDK19Q9BWU1 502 aa23.38■■□□□ 1.33
GCDH-201ENST00000222214 SENP3-EIF4A1A0A087X0R7 540 aa23.37■■□□□ 1.33
GCDH-201ENST00000222214 SALL2Q9Y467 1007 aaPredicted RBP23.37■■□□□ 1.33
GCDH-201ENST00000222214 CPS1P31327 1500 aa23.37■■□□□ 1.33
GCDH-201ENST00000222214 METP08581 1390 aa23.36■■□□□ 1.33
GCDH-201ENST00000222214 ANKRD26Q9UPS8 1709 aa23.36■■□□□ 1.33
GCDH-201ENST00000222214 HDGFL2Q7Z4V5 671 aaPredicted RBP23.36■■□□□ 1.33
GCDH-201ENST00000222214 PLEKHG1Q9ULL1 1385 aa23.35■■□□□ 1.33
GCDH-201ENST00000222214 ATP7BP35670 1465 aa23.34■■□□□ 1.33
GCDH-201ENST00000222214 CD163L1Q9NR16 1453 aa23.34■■□□□ 1.33
GCDH-201ENST00000222214 CFAP53Q96M91 514 aa23.34■■□□□ 1.33
GCDH-201ENST00000222214 RCAN3Q9UKA8 241 aa23.34■■□□□ 1.33
GCDH-201ENST00000222214 SLIT1O75093 1534 aa23.32■■□□□ 1.32
GCDH-201ENST00000222214 SHPRHQ149N8 1683 aa23.32■■□□□ 1.32
GCDH-201ENST00000222214 ZNF521Q96K83 1311 aa23.31■■□□□ 1.32
GCDH-201ENST00000222214 WAPLQ7Z5K2 1190 aa23.31■■□□□ 1.32
GCDH-201ENST00000222214 PLEKHH1Q9ULM0 1364 aa23.3■■□□□ 1.32
GCDH-201ENST00000222214 ADAMTS13Q76LX8 1427 aa23.3■■□□□ 1.32
GCDH-201ENST00000222214 EID1Q9Y6B2 187 aa23.3■■□□□ 1.32
GCDH-201ENST00000222214 ARHGAP23Q9P227 1491 aa23.3■■□□□ 1.32
GCDH-201ENST00000222214 CDCA7LQ96GN5 454 aa23.29■■□□□ 1.32
GCDH-201ENST00000222214 WASLO00401 505 aaPredicted RBP23.28■■□□□ 1.32
GCDH-201ENST00000222214 MTHFSP49914 203 aa23.28■■□□□ 1.32
GCDH-201ENST00000222214 GOLGA2Q08379 1002 aa23.27■■□□□ 1.32
GCDH-201ENST00000222214 KIF20BQ96Q89 1820 aa23.27■■□□□ 1.32
GCDH-201ENST00000222214 CEBPAP49715 358 aaPredicted RBP23.27■■□□□ 1.32
GCDH-201ENST00000222214 RRP1P56182 461 aaKnown RBP23.27■■□□□ 1.32
GCDH-201ENST00000222214 CABP1Q9NZU7 370 aa23.27■■□□□ 1.32
GCDH-201ENST00000222214 TNNT2P45379 298 aaPredicted RBP23.26■■□□□ 1.31
GCDH-201ENST00000222214 TXNDC2Q86VQ3 553 aa23.25■■□□□ 1.31
GCDH-201ENST00000222214 FYB1O15117 783 aa23.24■■□□□ 1.31
GCDH-201ENST00000222214 THEMISQ8N1K5 641 aaPredicted RBP23.24■■□□□ 1.31
GCDH-201ENST00000222214 ADGRB2O60241 1585 aa23.24■■□□□ 1.31
GCDH-201ENST00000222214 APAF1O14727 1248 aa23.23■■□□□ 1.31
GCDH-201ENST00000222214 CCDC146Q8IYE0 955 aa23.23■■□□□ 1.31
GCDH-201ENST00000222214 DIP2AQ14689 1571 aa23.23■■□□□ 1.31
GCDH-201ENST00000222214 LTKP29376 864 aa23.23■■□□□ 1.31
GCDH-201ENST00000222214 NCBP3Q53F19 620 aaKnown RBP23.22■■□□□ 1.31
GCDH-201ENST00000222214 RUNDC1Q96C34 613 aa23.21■■□□□ 1.31
GCDH-201ENST00000222214 CPSF1Q10570 1443 aaKnown RBP23.21■■□□□ 1.31
GCDH-201ENST00000222214 PPIP5K1Q6PFW1 1433 aa23.2■■□□□ 1.3
GCDH-201ENST00000222214 DUSP27Q5VZP5 1158 aa23.2■■□□□ 1.3
GCDH-201ENST00000222214 GGNBP2Q9H3C7 697 aa23.2■■□□□ 1.3
GCDH-201ENST00000222214 TSHZ2Q9NRE2 1034 aa23.2■■□□□ 1.3
GCDH-201ENST00000222214 EDC4Q6P2E9 1401 aaKnown RBP23.2■■□□□ 1.3
GCDH-201ENST00000222214 SLFN5Q08AF3 891 aa23.19■■□□□ 1.3
GCDH-201ENST00000222214 CDC42BPGQ6DT37 1551 aa23.19■■□□□ 1.3
GCDH-201ENST00000222214 TRMT2AQ8IZ69 625 aaKnown RBP23.18■■□□□ 1.3
GCDH-201ENST00000222214 TBX22Q9Y458 520 aa23.18■■□□□ 1.3
GCDH-201ENST00000222214 CCDC61Q9Y6R9 512 aa23.18■■□□□ 1.3
GCDH-201ENST00000222214 ROBO2Q9HCK4 1378 aa23.18■■□□□ 1.3
GCDH-201ENST00000222214 E9PSI1 815 aa23.18■■□□□ 1.3
GCDH-201ENST00000222214 IQSEC2Q5JU85 1478 aa23.17■■□□□ 1.3
GCDH-201ENST00000222214 NUDT16Q96DE0 195 aaKnown RBP23.16■■□□□ 1.3
GCDH-201ENST00000222214 MON2Q7Z3U7 1717 aa23.15■■□□□ 1.3
GCDH-201ENST00000222214 B4GALNT3Q6L9W6 998 aa23.15■■□□□ 1.3
GCDH-201ENST00000222214 COL3A1P02461 1466 aaPredicted RBP23.14■■□□□ 1.3
GCDH-201ENST00000222214 AKAP12Q02952 1782 aa23.14■■□□□ 1.29
GCDH-201ENST00000222214 PTCH1Q13635 1447 aa23.14■■□□□ 1.29
GCDH-201ENST00000222214 ITSN1Q15811 1721 aa23.14■■□□□ 1.29
GCDH-201ENST00000222214 ZNF692Q9BU19 519 aaPredicted RBP23.14■■□□□ 1.29
GCDH-201ENST00000222214 CEP170BQ9Y4F5 1589 aaPredicted RBP23.14■■□□□ 1.29
GCDH-201ENST00000222214 NKTRP30414 1462 aaKnown RBP23.13■■□□□ 1.29
GCDH-201ENST00000222214 PNPLA6Q8IY17 1366 aa23.12■■□□□ 1.29
GCDH-201ENST00000222214 CCDC27Q2M243 656 aa23.12■■□□□ 1.29
GCDH-201ENST00000222214 CCDC136Q96JN2 1154 aa23.12■■□□□ 1.29
GCDH-201ENST00000222214 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.12■■□□□ 1.29
GCDH-201ENST00000222214 RIMS1Q86UR5 1692 aaKnown RBP23.12■■□□□ 1.29
GCDH-201ENST00000222214 WWC1Q8IX03 1113 aa23.1■■□□□ 1.29
GCDH-201ENST00000222214 PTPRUQ92729 1446 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms