RNA–Protein interactions for RNA: ENST00000217398.3

PXMP4-201, Transcript of peroxisomal membrane protein 4, humanhuman

TSL 2 BASIC

Gene PXMP4, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-201ENST00000217398 ABCC11Q96J66 1382 aa27.19■■□□□ 1.94
PXMP4-201ENST00000217398 NRXN1Q9ULB1 1477 aa27.19■■□□□ 1.94
PXMP4-201ENST00000217398 ACIN1Q9UKV3 1341 aaKnown RBP27.17■■□□□ 1.94
PXMP4-201ENST00000217398 AFF2P51816 1311 aa27.16■■□□□ 1.94
PXMP4-201ENST00000217398 COL22A1Q8NFW1 1626 aaPredicted RBP27.16■■□□□ 1.94
PXMP4-201ENST00000217398 CDK12Q9NYV4 1490 aaPredicted RBP27.15■■□□□ 1.94
PXMP4-201ENST00000217398 PLEKHH1Q9ULM0 1364 aa27.15■■□□□ 1.94
PXMP4-201ENST00000217398 TMEM132EQ6IEE7 984 aa27.14■■□□□ 1.94
PXMP4-201ENST00000217398 WAPLQ7Z5K2 1190 aa27.14■■□□□ 1.94
PXMP4-201ENST00000217398 RAB3GAP2Q9H2M9 1393 aa27.13■■□□□ 1.93
PXMP4-201ENST00000217398 YTHDC2Q9H6S0 1430 aaKnown RBP27.13■■□□□ 1.93
PXMP4-201ENST00000217398 FMN2Q9NZ56 1722 aa27.13■■□□□ 1.93
PXMP4-201ENST00000217398 MYOM2P54296 1465 aa27.13■■□□□ 1.93
PXMP4-201ENST00000217398 PXDNQ92626 1479 aa27.13■■□□□ 1.93
PXMP4-201ENST00000217398 STK26Q9P289 416 aa27.12■■□□□ 1.93
PXMP4-201ENST00000217398 RXRBP28702 533 aa27.1■■□□□ 1.93
PXMP4-201ENST00000217398 C14orf93Q9H972 538 aaKnown RBP27.1■■□□□ 1.93
PXMP4-201ENST00000217398 C8orf37Q96NL8 207 aa27.08■■□□□ 1.93
PXMP4-201ENST00000217398 SIRT1Q96EB6 747 aa27.07■■□□□ 1.92
PXMP4-201ENST00000217398 ESCO1Q5FWF5 840 aa27.06■■□□□ 1.92
PXMP4-201ENST00000217398 NPHP3Q7Z494 1330 aa27.05■■□□□ 1.92
PXMP4-201ENST00000217398 UPF1Q92900 1129 aaKnown RBP eCLIP27.04■■□□□ 1.92
PXMP4-201ENST00000217398 MARF1Q9Y4F3 1742 aaKnown RBP27.04■■□□□ 1.92
PXMP4-201ENST00000217398 RGPD8O14715 1765 aaPredicted RBP27.04■■□□□ 1.92
PXMP4-201ENST00000217398 ADAMTS2O95450 1211 aa27.03■■□□□ 1.92
PXMP4-201ENST00000217398 CFAP70Q5T0N1 1121 aa27.03■■□□□ 1.92
PXMP4-201ENST00000217398 RGS12O14924 1447 aa27.02■■□□□ 1.92
PXMP4-201ENST00000217398 KIF1AQ12756 1690 aa27.01■■□□□ 1.92
PXMP4-201ENST00000217398 QTRT2Q9H974 415 aaKnown RBP27.01■■□□□ 1.91
PXMP4-201ENST00000217398 FOXO3O43524 673 aa27■■□□□ 1.91
PXMP4-201ENST00000217398 ADGRB1O14514 1584 aa27■■□□□ 1.91
PXMP4-201ENST00000217398 NUTM2FA1L443 756 aa26.99■■□□□ 1.91
PXMP4-201ENST00000217398 RBM6P78332 1123 aaKnown RBP26.99■■□□□ 1.91
PXMP4-201ENST00000217398 FNBP4Q8N3X1 1017 aaPredicted RBP26.99■■□□□ 1.91
PXMP4-201ENST00000217398 NGLY1Q96IV0 654 aa26.99■■□□□ 1.91
PXMP4-201ENST00000217398 DLC1Q96QB1 1528 aa26.98■■□□□ 1.91
PXMP4-201ENST00000217398 DHX57Q6P158 1386 aaKnown RBP26.97■■□□□ 1.91
PXMP4-201ENST00000217398 XPCQ01831 940 aaPredicted RBP26.97■■□□□ 1.91
PXMP4-201ENST00000217398 USP32Q8NFA0 1604 aa26.94■■□□□ 1.9
PXMP4-201ENST00000217398 ATRNO75882 1429 aa26.94■■□□□ 1.9
PXMP4-201ENST00000217398 ADGRB2O60241 1585 aa26.93■■□□□ 1.9
PXMP4-201ENST00000217398 HRCP23327 699 aa26.93■■□□□ 1.9
PXMP4-201ENST00000217398 USP21Q9UK80 565 aa26.92■■□□□ 1.9
PXMP4-201ENST00000217398 BCL9LQ86UU0 1499 aa26.92■■□□□ 1.9
PXMP4-201ENST00000217398 SPATA31A3Q5VYP0 1347 aa26.91■■□□□ 1.9
PXMP4-201ENST00000217398 PRAM1Q96QH2 718 aa26.9■■□□□ 1.9
PXMP4-201ENST00000217398 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.88■■□□□ 1.89
PXMP4-201ENST00000217398 TRPC5Q9UL62 973 aaPredicted RBP26.88■■□□□ 1.89
PXMP4-201ENST00000217398 KRT28Q7Z3Y7 464 aa26.86■■□□□ 1.89
PXMP4-201ENST00000217398 PHF8Q9UPP1 1060 aa26.85■■□□□ 1.89
PXMP4-201ENST00000217398 ABCA3Q99758 1704 aa26.85■■□□□ 1.89
PXMP4-201ENST00000217398 ANKARQ7Z5J8 1434 aa26.84■■□□□ 1.89
PXMP4-201ENST00000217398 SAFB2Q14151 953 aaKnown RBP eCLIP26.84■■□□□ 1.89
PXMP4-201ENST00000217398 SLIT2O94813 1529 aa26.84■■□□□ 1.89
PXMP4-201ENST00000217398 TNS3Q68CZ2 1445 aa26.82■■□□□ 1.88
PXMP4-201ENST00000217398 TRPM3Q9HCF6 1732 aaPredicted RBP26.81■■□□□ 1.88
PXMP4-201ENST00000217398 DCAF11Q8TEB1 546 aa26.8■■□□□ 1.88
PXMP4-201ENST00000217398 STAC3Q96MF2 364 aa26.8■■□□□ 1.88
PXMP4-201ENST00000217398 SBNO1A3KN83 1393 aa26.8■■□□□ 1.88
PXMP4-201ENST00000217398 ARHGEF28Q8N1W1 1705 aaKnown RBP26.79■■□□□ 1.88
PXMP4-201ENST00000217398 POGKQ9P215 609 aa26.79■■□□□ 1.88
PXMP4-201ENST00000217398 TRAK1Q9UPV9 953 aa26.79■■□□□ 1.88
PXMP4-201ENST00000217398 KDM2AQ9Y2K7 1162 aa26.79■■□□□ 1.88
PXMP4-201ENST00000217398 GLI3P10071 1580 aa26.78■■□□□ 1.88
PXMP4-201ENST00000217398 EP400Q96L91 3159 aa26.78■■□□□ 1.88
PXMP4-201ENST00000217398 PRR36Q9H6K5 1346 aa26.77■■□□□ 1.88
PXMP4-201ENST00000217398 ALS2Q96Q42 1657 aa26.76■■□□□ 1.87
PXMP4-201ENST00000217398 TULP4Q9NRJ4 1543 aa26.75■■□□□ 1.87
PXMP4-201ENST00000217398 PLCH1Q4KWH8 1693 aa26.74■■□□□ 1.87
PXMP4-201ENST00000217398 PSME1Q06323 249 aa26.74■■□□□ 1.87
PXMP4-201ENST00000217398 GJD4Q96KN9 370 aaPredicted RBP26.74■■□□□ 1.87
PXMP4-201ENST00000217398 NWD2Q9ULI1 1742 aa26.73■■□□□ 1.87
PXMP4-201ENST00000217398 ATAD2Q6PL18 1390 aa26.73■■□□□ 1.87
PXMP4-201ENST00000217398 PMFBP1Q8TBY8 1022 aa26.73■■□□□ 1.87
PXMP4-201ENST00000217398 HIRIP3Q9BW71 556 aaPredicted RBP26.73■■□□□ 1.87
PXMP4-201ENST00000217398 UNC5CLQ8IV45 518 aa26.72■■□□□ 1.87
PXMP4-201ENST00000217398 CABLES1Q8TDN4 633 aa26.72■■□□□ 1.87
PXMP4-201ENST00000217398 RALGAPBQ86X10 1494 aa26.72■■□□□ 1.87
PXMP4-201ENST00000217398 MINK1Q8N4C8 1332 aaPredicted RBP26.71■■□□□ 1.87
PXMP4-201ENST00000217398 KIAA1210Q9ULL0 1709 aa26.71■■□□□ 1.87
PXMP4-201ENST00000217398 ARHGEF10O15013 1369 aa26.71■■□□□ 1.87
PXMP4-201ENST00000217398 CRYBG1Q9Y4K1 1723 aa26.7■■□□□ 1.87
PXMP4-201ENST00000217398 WASLO00401 505 aaPredicted RBP26.7■■□□□ 1.86
PXMP4-201ENST00000217398 BRWD3Q6RI45 1802 aa26.69■■□□□ 1.86
PXMP4-201ENST00000217398 EIF3AQ14152 1382 aaKnown RBP26.68■■□□□ 1.86
PXMP4-201ENST00000217398 ITSN1Q15811 1721 aa26.66■■□□□ 1.86
PXMP4-201ENST00000217398 NRAPQ86VF7 1730 aa26.66■■□□□ 1.86
PXMP4-201ENST00000217398 ATP7BP35670 1465 aa26.66■■□□□ 1.86
PXMP4-201ENST00000217398 VPS72Q15906 364 aa26.62■■□□□ 1.85
PXMP4-201ENST00000217398 TOPAZ1Q8N9V7 1692 aa26.62■■□□□ 1.85
PXMP4-201ENST00000217398 FAM83GA6ND36 823 aa26.6■■□□□ 1.85
PXMP4-201ENST00000217398 LMOD2Q6P5Q4 547 aa26.6■■□□□ 1.85
PXMP4-201ENST00000217398 GPRASP1Q5JY77 1395 aa26.59■■□□□ 1.85
PXMP4-201ENST00000217398 ONECUT3O60422 494 aaPredicted RBP26.59■■□□□ 1.85
PXMP4-201ENST00000217398 COL14A1Q05707 1796 aaKnown RBP26.58■■□□□ 1.85
PXMP4-201ENST00000217398 PLEKHG5O94827 1062 aa26.58■■□□□ 1.85
PXMP4-201ENST00000217398 HAP1P54257 671 aaPredicted RBP26.58■■□□□ 1.85
PXMP4-201ENST00000217398 NUDT16Q96DE0 195 aaKnown RBP26.57■■□□□ 1.84
PXMP4-201ENST00000217398 NBPF1Q3BBV0 1214 aa26.55■■□□□ 1.84
PXMP4-201ENST00000217398 CCDC125Q86Z20 511 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms