RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TECPR2O15040 1411 aa22.24■■□□□ 1.15
UPK3A-201ENST00000216211 TMEM132EQ6IEE7 984 aa22.24■■□□□ 1.15
UPK3A-201ENST00000216211 WAPLQ7Z5K2 1190 aa22.24■■□□□ 1.15
UPK3A-201ENST00000216211 AFF2P51816 1311 aa22.24■■□□□ 1.15
UPK3A-201ENST00000216211 RAB3GAP2Q9H2M9 1393 aa22.24■■□□□ 1.15
UPK3A-201ENST00000216211 SOS2Q07890 1332 aaPredicted RBP22.23■■□□□ 1.15
UPK3A-201ENST00000216211 C8orf37Q96NL8 207 aa22.21■■□□□ 1.15
UPK3A-201ENST00000216211 ABCC11Q96J66 1382 aa22.21■■□□□ 1.15
UPK3A-201ENST00000216211 PLEKHH1Q9ULM0 1364 aa22.21■■□□□ 1.15
UPK3A-201ENST00000216211 FMN2Q9NZ56 1722 aa22.2■■□□□ 1.14
UPK3A-201ENST00000216211 ESCO1Q5FWF5 840 aa22.2■■□□□ 1.14
UPK3A-201ENST00000216211 YTHDC2Q9H6S0 1430 aaKnown RBP22.2■■□□□ 1.14
UPK3A-201ENST00000216211 COL22A1Q8NFW1 1626 aaPredicted RBP22.2■■□□□ 1.14
UPK3A-201ENST00000216211 RXRBP28702 533 aa22.19■■□□□ 1.14
UPK3A-201ENST00000216211 MYOM2P54296 1465 aa22.18■■□□□ 1.14
UPK3A-201ENST00000216211 NRXN1Q9ULB1 1477 aa22.18■■□□□ 1.14
UPK3A-201ENST00000216211 NUTM2FA1L443 756 aa22.18■■□□□ 1.14
UPK3A-201ENST00000216211 RGPD8O14715 1765 aaPredicted RBP22.17■■□□□ 1.14
UPK3A-201ENST00000216211 ADAMTS2O95450 1211 aa22.16■■□□□ 1.14
UPK3A-201ENST00000216211 PXDNQ92626 1479 aa22.15■■□□□ 1.14
UPK3A-201ENST00000216211 C14orf93Q9H972 538 aaKnown RBP22.15■■□□□ 1.14
UPK3A-201ENST00000216211 MARF1Q9Y4F3 1742 aaKnown RBP22.14■■□□□ 1.14
UPK3A-201ENST00000216211 NPHP3Q7Z494 1330 aa22.14■■□□□ 1.14
UPK3A-201ENST00000216211 CFAP70Q5T0N1 1121 aa22.14■■□□□ 1.13
UPK3A-201ENST00000216211 CDK12Q9NYV4 1490 aaPredicted RBP22.14■■□□□ 1.13
UPK3A-201ENST00000216211 XPCQ01831 940 aaPredicted RBP22.13■■□□□ 1.13
UPK3A-201ENST00000216211 NGLY1Q96IV0 654 aa22.13■■□□□ 1.13
UPK3A-201ENST00000216211 KIF1AQ12756 1690 aa22.13■■□□□ 1.13
UPK3A-201ENST00000216211 FOXO3O43524 673 aa22.12■■□□□ 1.13
UPK3A-201ENST00000216211 QTRT2Q9H974 415 aaKnown RBP22.12■■□□□ 1.13
UPK3A-201ENST00000216211 DHX57Q6P158 1386 aaKnown RBP22.12■■□□□ 1.13
UPK3A-201ENST00000216211 UPF1Q92900 1129 aaKnown RBP eCLIP22.09■■□□□ 1.13
UPK3A-201ENST00000216211 SIRT1Q96EB6 747 aa22.09■■□□□ 1.13
UPK3A-201ENST00000216211 RGS12O14924 1447 aa22.08■■□□□ 1.13
UPK3A-201ENST00000216211 RBM6P78332 1123 aaKnown RBP22.08■■□□□ 1.13
UPK3A-201ENST00000216211 SAFB2Q14151 953 aaKnown RBP eCLIP22.06■■□□□ 1.12
UPK3A-201ENST00000216211 PRAM1Q96QH2 718 aa22.05■■□□□ 1.12
UPK3A-201ENST00000216211 USP21Q9UK80 565 aa22.05■■□□□ 1.12
UPK3A-201ENST00000216211 DLC1Q96QB1 1528 aa22.05■■□□□ 1.12
UPK3A-201ENST00000216211 ADGRB1O14514 1584 aa22.04■■□□□ 1.12
UPK3A-201ENST00000216211 KDM2AQ9Y2K7 1162 aa22.03■■□□□ 1.12
UPK3A-201ENST00000216211 USP32Q8NFA0 1604 aa22.02■■□□□ 1.12
UPK3A-201ENST00000216211 FNBP4Q8N3X1 1017 aaPredicted RBP22.02■■□□□ 1.12
UPK3A-201ENST00000216211 DCAF11Q8TEB1 546 aa22.02■■□□□ 1.12
UPK3A-201ENST00000216211 KRT28Q7Z3Y7 464 aa22.01■■□□□ 1.11
UPK3A-201ENST00000216211 POGKQ9P215 609 aa22.01■■□□□ 1.11
UPK3A-201ENST00000216211 TRPC5Q9UL62 973 aaPredicted RBP22.01■■□□□ 1.11
UPK3A-201ENST00000216211 ADGRB2O60241 1585 aa22■■□□□ 1.11
UPK3A-201ENST00000216211 ATRNO75882 1429 aa22■■□□□ 1.11
UPK3A-201ENST00000216211 HRCP23327 699 aa22■■□□□ 1.11
UPK3A-201ENST00000216211 PHF8Q9UPP1 1060 aa22■■□□□ 1.11
UPK3A-201ENST00000216211 SPATA31A3Q5VYP0 1347 aa22■■□□□ 1.11
UPK3A-201ENST00000216211 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.98■■□□□ 1.11
UPK3A-201ENST00000216211 TRAK1Q9UPV9 953 aa21.98■■□□□ 1.11
UPK3A-201ENST00000216211 BCL9LQ86UU0 1499 aa21.97■■□□□ 1.11
UPK3A-201ENST00000216211 ABCA3Q99758 1704 aa21.97■■□□□ 1.11
UPK3A-201ENST00000216211 TNS3Q68CZ2 1445 aa21.96■■□□□ 1.11
UPK3A-201ENST00000216211 ARHGEF28Q8N1W1 1705 aaKnown RBP21.95■■□□□ 1.1
UPK3A-201ENST00000216211 PSME1Q06323 249 aa21.94■■□□□ 1.1
UPK3A-201ENST00000216211 HIRIP3Q9BW71 556 aaPredicted RBP21.94■■□□□ 1.1
UPK3A-201ENST00000216211 ANKARQ7Z5J8 1434 aa21.94■■□□□ 1.1
UPK3A-201ENST00000216211 MINK1Q8N4C8 1332 aaPredicted RBP21.93■■□□□ 1.1
UPK3A-201ENST00000216211 PMFBP1Q8TBY8 1022 aa21.93■■□□□ 1.1
UPK3A-201ENST00000216211 PLEKHG5O94827 1062 aa21.92■■□□□ 1.1
UPK3A-201ENST00000216211 STAC3Q96MF2 364 aa21.92■■□□□ 1.1
UPK3A-201ENST00000216211 TRPM3Q9HCF6 1732 aaPredicted RBP21.92■■□□□ 1.1
UPK3A-201ENST00000216211 PLCH1Q4KWH8 1693 aa21.91■■□□□ 1.1
UPK3A-201ENST00000216211 SLIT2O94813 1529 aa21.9■■□□□ 1.1
UPK3A-201ENST00000216211 SBNO1A3KN83 1393 aa21.9■■□□□ 1.1
UPK3A-201ENST00000216211 LMOD2Q6P5Q4 547 aa21.9■■□□□ 1.1
UPK3A-201ENST00000216211 CABLES1Q8TDN4 633 aa21.9■■□□□ 1.1
UPK3A-201ENST00000216211 TULP4Q9NRJ4 1543 aa21.9■■□□□ 1.1
UPK3A-201ENST00000216211 HAP1P54257 671 aaPredicted RBP21.89■■□□□ 1.09
UPK3A-201ENST00000216211 ATAD2Q6PL18 1390 aa21.88■■□□□ 1.09
UPK3A-201ENST00000216211 GLI3P10071 1580 aa21.88■■□□□ 1.09
UPK3A-201ENST00000216211 GJD4Q96KN9 370 aaPredicted RBP21.88■■□□□ 1.09
UPK3A-201ENST00000216211 ALS2Q96Q42 1657 aa21.88■■□□□ 1.09
UPK3A-201ENST00000216211 PRR36Q9H6K5 1346 aa21.87■■□□□ 1.09
UPK3A-201ENST00000216211 ITSN1Q15811 1721 aa21.87■■□□□ 1.09
UPK3A-201ENST00000216211 NWD2Q9ULI1 1742 aa21.87■■□□□ 1.09
UPK3A-201ENST00000216211 UNC5CLQ8IV45 518 aa21.87■■□□□ 1.09
UPK3A-201ENST00000216211 ARHGEF10O15013 1369 aa21.87■■□□□ 1.09
UPK3A-201ENST00000216211 EIF3AQ14152 1382 aaKnown RBP21.87■■□□□ 1.09
UPK3A-201ENST00000216211 KIAA1210Q9ULL0 1709 aa21.86■■□□□ 1.09
UPK3A-201ENST00000216211 BRWD3Q6RI45 1802 aa21.86■■□□□ 1.09
UPK3A-201ENST00000216211 WASLO00401 505 aaPredicted RBP21.86■■□□□ 1.09
UPK3A-201ENST00000216211 EP400Q96L91 3159 aa21.85■■□□□ 1.09
UPK3A-201ENST00000216211 RALGAPBQ86X10 1494 aa21.84■■□□□ 1.09
UPK3A-201ENST00000216211 CRYBG1Q9Y4K1 1723 aa21.82■■□□□ 1.08
UPK3A-201ENST00000216211 GPRASP1Q5JY77 1395 aa21.82■■□□□ 1.08
UPK3A-201ENST00000216211 ATP7BP35670 1465 aa21.8■■□□□ 1.08
UPK3A-201ENST00000216211 NRAPQ86VF7 1730 aa21.8■■□□□ 1.08
UPK3A-201ENST00000216211 TOPAZ1Q8N9V7 1692 aa21.79■■□□□ 1.08
UPK3A-201ENST00000216211 NGDNQ8NEJ9 315 aaKnown RBP21.78■■□□□ 1.08
UPK3A-201ENST00000216211 COL14A1Q05707 1796 aaKnown RBP21.77■■□□□ 1.08
UPK3A-201ENST00000216211 FAM83GA6ND36 823 aa21.77■■□□□ 1.08
UPK3A-201ENST00000216211 VPS72Q15906 364 aa21.76■■□□□ 1.07
UPK3A-201ENST00000216211 NUDT16Q96DE0 195 aaKnown RBP21.76■■□□□ 1.07
UPK3A-201ENST00000216211 PAK3O75914 559 aaPredicted RBP21.75■■□□□ 1.07
UPK3A-201ENST00000216211 NBPF1Q3BBV0 1214 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms