RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 KNDC1Q76NI1 1749 aa29.45■■■□□ 2.3
SYNGR1-201ENST00000216155 ANKRD30BQ9BXX2 1392 aa29.44■■■□□ 2.3
SYNGR1-201ENST00000216155 RGL3Q3MIN7 710 aa29.44■■■□□ 2.3
SYNGR1-201ENST00000216155 COL22A1Q8NFW1 1626 aaPredicted RBP29.44■■■□□ 2.3
SYNGR1-201ENST00000216155 RGS12O14924 1447 aa29.44■■■□□ 2.3
SYNGR1-201ENST00000216155 PIK3C2GO75747 1445 aa29.43■■■□□ 2.3
SYNGR1-201ENST00000216155 ADAMTS2O95450 1211 aa29.42■■■□□ 2.3
SYNGR1-201ENST00000216155 LRPPRCP42704 1394 aaKnown RBP29.41■■■□□ 2.3
SYNGR1-201ENST00000216155 PXDNQ92626 1479 aa29.39■■■□□ 2.3
SYNGR1-201ENST00000216155 RBM6P78332 1123 aaKnown RBP29.38■■■□□ 2.29
SYNGR1-201ENST00000216155 QTRT2Q9H974 415 aaKnown RBP29.38■■■□□ 2.29
SYNGR1-201ENST00000216155 NGLY1Q96IV0 654 aa29.37■■■□□ 2.29
SYNGR1-201ENST00000216155 STK26Q9P289 416 aa29.37■■■□□ 2.29
SYNGR1-201ENST00000216155 NPHP3Q7Z494 1330 aa29.37■■■□□ 2.29
SYNGR1-201ENST00000216155 ABCC11Q96J66 1382 aa29.37■■■□□ 2.29
SYNGR1-201ENST00000216155 PLEKHH1Q9ULM0 1364 aa29.37■■■□□ 2.29
SYNGR1-201ENST00000216155 MYOM2P54296 1465 aa29.36■■■□□ 2.29
SYNGR1-201ENST00000216155 ESCO1Q5FWF5 840 aa29.36■■■□□ 2.29
SYNGR1-201ENST00000216155 WAPLQ7Z5K2 1190 aa29.36■■■□□ 2.29
SYNGR1-201ENST00000216155 TMEM132EQ6IEE7 984 aa29.34■■■□□ 2.29
SYNGR1-201ENST00000216155 FMN2Q9NZ56 1722 aa29.33■■■□□ 2.29
SYNGR1-201ENST00000216155 YTHDC2Q9H6S0 1430 aaKnown RBP29.32■■■□□ 2.28
SYNGR1-201ENST00000216155 USP21Q9UK80 565 aa29.3■■■□□ 2.28
SYNGR1-201ENST00000216155 NRXN1Q9ULB1 1477 aa29.29■■■□□ 2.28
SYNGR1-201ENST00000216155 MARF1Q9Y4F3 1742 aaKnown RBP29.29■■■□□ 2.28
SYNGR1-201ENST00000216155 NUTM2FA1L443 756 aa29.29■■■□□ 2.28
SYNGR1-201ENST00000216155 FOXO3O43524 673 aa29.29■■■□□ 2.28
SYNGR1-201ENST00000216155 XPCQ01831 940 aaPredicted RBP29.29■■■□□ 2.28
SYNGR1-201ENST00000216155 FNBP4Q8N3X1 1017 aaPredicted RBP29.28■■■□□ 2.28
SYNGR1-201ENST00000216155 KIF1AQ12756 1690 aa29.28■■■□□ 2.28
SYNGR1-201ENST00000216155 ATRNO75882 1429 aa29.27■■■□□ 2.28
SYNGR1-201ENST00000216155 TRPC5Q9UL62 973 aaPredicted RBP29.25■■■□□ 2.27
SYNGR1-201ENST00000216155 ACIN1Q9UKV3 1341 aaKnown RBP29.23■■■□□ 2.27
SYNGR1-201ENST00000216155 C14orf93Q9H972 538 aaKnown RBP29.23■■■□□ 2.27
SYNGR1-201ENST00000216155 BCL9LQ86UU0 1499 aa29.21■■■□□ 2.27
SYNGR1-201ENST00000216155 RAB3GAP2Q9H2M9 1393 aa29.19■■■□□ 2.26
SYNGR1-201ENST00000216155 SIRT1Q96EB6 747 aa29.19■■■□□ 2.26
SYNGR1-201ENST00000216155 RGPD8O14715 1765 aaPredicted RBP29.18■■■□□ 2.26
SYNGR1-201ENST00000216155 CFAP70Q5T0N1 1121 aa29.18■■■□□ 2.26
SYNGR1-201ENST00000216155 ATAD2Q6PL18 1390 aa29.17■■■□□ 2.26
SYNGR1-201ENST00000216155 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.17■■■□□ 2.26
SYNGR1-201ENST00000216155 DHX57Q6P158 1386 aaKnown RBP29.16■■■□□ 2.26
SYNGR1-201ENST00000216155 SPATA31A3Q5VYP0 1347 aa29.16■■■□□ 2.26
SYNGR1-201ENST00000216155 EP400Q96L91 3159 aa29.14■■■□□ 2.26
SYNGR1-201ENST00000216155 USP32Q8NFA0 1604 aa29.14■■■□□ 2.26
SYNGR1-201ENST00000216155 DLC1Q96QB1 1528 aa29.14■■■□□ 2.25
SYNGR1-201ENST00000216155 ADGRB1O14514 1584 aa29.12■■■□□ 2.25
SYNGR1-201ENST00000216155 SLIT2O94813 1529 aa29.11■■■□□ 2.25
SYNGR1-201ENST00000216155 PRAM1Q96QH2 718 aa29.11■■■□□ 2.25
SYNGR1-201ENST00000216155 TNS3Q68CZ2 1445 aa29.11■■■□□ 2.25
SYNGR1-201ENST00000216155 ADGRB2O60241 1585 aa29.1■■■□□ 2.25
SYNGR1-201ENST00000216155 KRT28Q7Z3Y7 464 aa29.1■■■□□ 2.25
SYNGR1-201ENST00000216155 SAFB2Q14151 953 aaKnown RBP eCLIP29.09■■■□□ 2.25
SYNGR1-201ENST00000216155 PHF8Q9UPP1 1060 aa29.09■■■□□ 2.25
SYNGR1-201ENST00000216155 GLI3P10071 1580 aa29.07■■■□□ 2.24
SYNGR1-201ENST00000216155 ABCA3Q99758 1704 aa29.07■■■□□ 2.24
SYNGR1-201ENST00000216155 GJD4Q96KN9 370 aaPredicted RBP29.06■■■□□ 2.24
SYNGR1-201ENST00000216155 ANKARQ7Z5J8 1434 aa29.05■■■□□ 2.24
SYNGR1-201ENST00000216155 RALGAPBQ86X10 1494 aa29.04■■■□□ 2.24
SYNGR1-201ENST00000216155 SBNO1A3KN83 1393 aa29.03■■■□□ 2.24
SYNGR1-201ENST00000216155 UNC5CLQ8IV45 518 aa29.03■■■□□ 2.24
SYNGR1-201ENST00000216155 PSME1Q06323 249 aa29.01■■■□□ 2.23
SYNGR1-201ENST00000216155 POGKQ9P215 609 aa29.01■■■□□ 2.23
SYNGR1-201ENST00000216155 PLCH1Q4KWH8 1693 aa29.01■■■□□ 2.23
SYNGR1-201ENST00000216155 CABLES1Q8TDN4 633 aa28.99■■■□□ 2.23
SYNGR1-201ENST00000216155 TRPM3Q9HCF6 1732 aaPredicted RBP28.98■■■□□ 2.23
SYNGR1-201ENST00000216155 NWD2Q9ULI1 1742 aa28.98■■■□□ 2.23
SYNGR1-201ENST00000216155 SRCAPQ6ZRS2 3230 aa28.98■■■□□ 2.23
SYNGR1-201ENST00000216155 ARHGEF10O15013 1369 aa28.98■■■□□ 2.23
SYNGR1-201ENST00000216155 TRAK1Q9UPV9 953 aa28.97■■■□□ 2.23
SYNGR1-201ENST00000216155 HAP1P54257 671 aaPredicted RBP28.96■■■□□ 2.23
SYNGR1-201ENST00000216155 PMFBP1Q8TBY8 1022 aa28.96■■■□□ 2.23
SYNGR1-201ENST00000216155 TULP4Q9NRJ4 1543 aa28.95■■■□□ 2.23
SYNGR1-201ENST00000216155 PLEKHG5O94827 1062 aa28.94■■■□□ 2.22
SYNGR1-201ENST00000216155 HIRIP3Q9BW71 556 aaPredicted RBP28.94■■■□□ 2.22
SYNGR1-201ENST00000216155 BRWD3Q6RI45 1802 aa28.94■■■□□ 2.22
SYNGR1-201ENST00000216155 LMOD2Q6P5Q4 547 aa28.93■■■□□ 2.22
SYNGR1-201ENST00000216155 DCAF11Q8TEB1 546 aa28.93■■■□□ 2.22
SYNGR1-201ENST00000216155 KDM2AQ9Y2K7 1162 aa28.93■■■□□ 2.22
SYNGR1-201ENST00000216155 ALS2Q96Q42 1657 aa28.93■■■□□ 2.22
SYNGR1-201ENST00000216155 MINK1Q8N4C8 1332 aaPredicted RBP28.92■■■□□ 2.22
SYNGR1-201ENST00000216155 PRR36Q9H6K5 1346 aa28.92■■■□□ 2.22
SYNGR1-201ENST00000216155 EIF3AQ14152 1382 aaKnown RBP28.91■■■□□ 2.22
SYNGR1-201ENST00000216155 ARHGEF28Q8N1W1 1705 aaKnown RBP28.91■■■□□ 2.22
SYNGR1-201ENST00000216155 VPS72Q15906 364 aa28.89■■■□□ 2.22
SYNGR1-201ENST00000216155 CCDC125Q86Z20 511 aa28.89■■■□□ 2.22
SYNGR1-201ENST00000216155 NRAPQ86VF7 1730 aa28.89■■■□□ 2.21
SYNGR1-201ENST00000216155 WASLO00401 505 aaPredicted RBP28.86■■■□□ 2.21
SYNGR1-201ENST00000216155 STAC3Q96MF2 364 aa28.86■■■□□ 2.21
SYNGR1-201ENST00000216155 GPRASP1Q5JY77 1395 aa28.86■■■□□ 2.21
SYNGR1-201ENST00000216155 CRYBG1Q9Y4K1 1723 aa28.86■■■□□ 2.21
SYNGR1-201ENST00000216155 HRCP23327 699 aa28.85■■■□□ 2.21
SYNGR1-201ENST00000216155 BLMP54132 1417 aaPredicted RBP28.85■■■□□ 2.21
SYNGR1-201ENST00000216155 FAM83GA6ND36 823 aa28.84■■■□□ 2.21
SYNGR1-201ENST00000216155 SEPT12Q8IYM1 358 aa28.84■■■□□ 2.21
SYNGR1-201ENST00000216155 ATP7BP35670 1465 aa28.83■■■□□ 2.21
SYNGR1-201ENST00000216155 ITSN1Q15811 1721 aa28.83■■■□□ 2.21
SYNGR1-201ENST00000216155 CCDC9Q9Y3X0 531 aaKnown RBP28.82■■■□□ 2.2
SYNGR1-201ENST00000216155 COL14A1Q05707 1796 aaKnown RBP28.82■■■□□ 2.2
SYNGR1-201ENST00000216155 ZRANB1Q9UGI0 708 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms