RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 KIF7Q2M1P5 1343 aa13.85□□□□□ -0.19
RTCB-201ENST00000216038 STRCP1A6NGW2 1772 aa13.85□□□□□ -0.19
RTCB-201ENST00000216038 TMF1P82094 1093 aa13.84□□□□□ -0.19
RTCB-201ENST00000216038 ZNF335Q9H4Z2 1342 aaPredicted RBP13.84□□□□□ -0.19
RTCB-201ENST00000216038 DIEXFQ68CQ4 756 aaKnown RBP13.83□□□□□ -0.2
RTCB-201ENST00000216038 FAM135BQ49AJ0 1406 aa13.83□□□□□ -0.2
RTCB-201ENST00000216038 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.83□□□□□ -0.2
RTCB-201ENST00000216038 CCDC7Q96M83 1385 aa13.83□□□□□ -0.2
RTCB-201ENST00000216038 PTCH1Q13635 1447 aa13.82□□□□□ -0.2
RTCB-201ENST00000216038 DDX10Q13206 875 aaKnown RBP13.82□□□□□ -0.2
RTCB-201ENST00000216038 DMRT2Q9Y5R5 561 aa13.82□□□□□ -0.2
RTCB-201ENST00000216038 PROSER2Q86WR7 435 aaPredicted RBP13.81□□□□□ -0.2
RTCB-201ENST00000216038 SIRT1Q96EB6 747 aa13.81□□□□□ -0.2
RTCB-201ENST00000216038 CABP2Q9NPB3 220 aa13.81□□□□□ -0.2
RTCB-201ENST00000216038 TULP4Q9NRJ4 1543 aa13.81□□□□□ -0.2
RTCB-201ENST00000216038 SBNO2Q9Y2G9 1366 aa13.81□□□□□ -0.2
RTCB-201ENST00000216038 NWD1Q149M9 1564 aa13.8□□□□□ -0.2
RTCB-201ENST00000216038 EVC2Q86UK5 1308 aa13.8□□□□□ -0.2
RTCB-201ENST00000216038 NUTM2FA1L443 756 aa13.8□□□□□ -0.2
RTCB-201ENST00000216038 SRPK2P78362 688 aaKnown RBP13.8□□□□□ -0.2
RTCB-201ENST00000216038 C14orf37Q86TY3 774 aa13.8□□□□□ -0.2
RTCB-201ENST00000216038 CDK19Q9BWU1 502 aa13.79□□□□□ -0.2
RTCB-201ENST00000216038 NALCNQ8IZF0 1738 aa13.78□□□□□ -0.2
RTCB-201ENST00000216038 WASLO00401 505 aaPredicted RBP13.76□□□□□ -0.21
RTCB-201ENST00000216038 TMEM94Q12767 1356 aa13.76□□□□□ -0.21
RTCB-201ENST00000216038 NKTRP30414 1462 aaKnown RBP13.76□□□□□ -0.21
RTCB-201ENST00000216038 SLC24A1O60721 1099 aa13.76□□□□□ -0.21
RTCB-201ENST00000216038 CDCA8Q53HL2 280 aa13.76□□□□□ -0.21
RTCB-201ENST00000216038 TMC1Q8TDI8 760 aa13.75□□□□□ -0.21
RTCB-201ENST00000216038 XIRP1Q702N8 1843 aaKnown RBP13.73□□□□□ -0.21
RTCB-201ENST00000216038 SLC12A5Q9H2X9 1139 aa13.73□□□□□ -0.21
RTCB-201ENST00000216038 ADGRB2O60241 1585 aa13.73□□□□□ -0.21
RTCB-201ENST00000216038 MYOM1P52179 1685 aa13.73□□□□□ -0.21
RTCB-201ENST00000216038 RGPD8O14715 1765 aaPredicted RBP13.73□□□□□ -0.21
RTCB-201ENST00000216038 LRRC7Q96NW7 1537 aa13.72□□□□□ -0.21
RTCB-201ENST00000216038 ADGRL3Q9HAR2 1447 aa13.72□□□□□ -0.21
RTCB-201ENST00000216038 CNGB1Q14028 1251 aaPredicted RBP13.72□□□□□ -0.21
RTCB-201ENST00000216038 PRR36Q9H6K5 1346 aa13.72□□□□□ -0.21
RTCB-201ENST00000216038 NUDT16Q96DE0 195 aaKnown RBP13.71□□□□□ -0.21
RTCB-201ENST00000216038 PANK3Q9H999 370 aa13.71□□□□□ -0.22
RTCB-201ENST00000216038 CABP1Q9NZU7 370 aa13.71□□□□□ -0.22
RTCB-201ENST00000216038 C19orf44Q9H6X5 657 aa13.7□□□□□ -0.22
RTCB-201ENST00000216038 ATAD2Q6PL18 1390 aa13.69□□□□□ -0.22
RTCB-201ENST00000216038 USP32Q8NFA0 1604 aa13.69□□□□□ -0.22
RTCB-201ENST00000216038 ATP7BP35670 1465 aa13.69□□□□□ -0.22
RTCB-201ENST00000216038 FMN2Q9NZ56 1722 aa13.69□□□□□ -0.22
RTCB-201ENST00000216038 CDC42BPGQ6DT37 1551 aa13.69□□□□□ -0.22
RTCB-201ENST00000216038 BCL11AQ9H165 835 aa13.68□□□□□ -0.22
RTCB-201ENST00000216038 PPIP5K1Q6PFW1 1433 aa13.68□□□□□ -0.22
RTCB-201ENST00000216038 PMFBP1Q8TBY8 1022 aa13.68□□□□□ -0.22
RTCB-201ENST00000216038 PUS7Q96PZ0 661 aaKnown RBP13.68□□□□□ -0.22
RTCB-201ENST00000216038 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
RTCB-201ENST00000216038 LTBP4Q8N2S1 1624 aa13.67□□□□□ -0.22
RTCB-201ENST00000216038 ATF3P18847 181 aa13.67□□□□□ -0.22
RTCB-201ENST00000216038 MSH6P52701 1360 aa13.67□□□□□ -0.22
RTCB-201ENST00000216038 CARD14Q9BXL6 1004 aa13.65□□□□□ -0.22
RTCB-201ENST00000216038 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
RTCB-201ENST00000216038 ESCO1Q5FWF5 840 aa13.64□□□□□ -0.23
RTCB-201ENST00000216038 ORAI2Q96SN7 254 aa13.64□□□□□ -0.23
RTCB-201ENST00000216038 TOPAZ1Q8N9V7 1692 aa13.64□□□□□ -0.23
RTCB-201ENST00000216038 A0A1W2PP64 1363 aa13.64□□□□□ -0.23
RTCB-201ENST00000216038 CD163L1Q9NR16 1453 aa13.63□□□□□ -0.23
RTCB-201ENST00000216038 CADPS2Q86UW7 1296 aa13.63□□□□□ -0.23
RTCB-201ENST00000216038 ITSN1Q15811 1721 aa13.63□□□□□ -0.23
RTCB-201ENST00000216038 ACEP12821 1306 aa13.63□□□□□ -0.23
RTCB-201ENST00000216038 PER1O15534 1290 aaPredicted RBP13.63□□□□□ -0.23
RTCB-201ENST00000216038 ANP32EQ9BTT0 268 aa13.63□□□□□ -0.23
RTCB-201ENST00000216038 TERF2IPQ9NYB0 399 aa13.63□□□□□ -0.23
RTCB-201ENST00000216038 ANKARQ7Z5J8 1434 aa13.62□□□□□ -0.23
RTCB-201ENST00000216038 ANKRD36BQ8N2N9 1353 aa13.62□□□□□ -0.23
RTCB-201ENST00000216038 NGDNQ8NEJ9 315 aaKnown RBP13.62□□□□□ -0.23
RTCB-201ENST00000216038 MST1RQ04912 1400 aa13.62□□□□□ -0.23
RTCB-201ENST00000216038 NINLQ9Y2I6 1382 aa13.62□□□□□ -0.23
RTCB-201ENST00000216038 HDGFL2Q7Z4V5 671 aaPredicted RBP13.61□□□□□ -0.23
RTCB-201ENST00000216038 KNSTRNQ9Y448 316 aa13.61□□□□□ -0.23
RTCB-201ENST00000216038 C1orf167Q5SNV9 1468 aa13.61□□□□□ -0.23
RTCB-201ENST00000216038 DCCP43146 1447 aa13.61□□□□□ -0.23
RTCB-201ENST00000216038 NSD3Q9BZ95 1437 aa13.61□□□□□ -0.23
RTCB-201ENST00000216038 CC2D1BQ5T0F9 858 aaKnown RBP13.61□□□□□ -0.23
RTCB-201ENST00000216038 PHF8Q9UPP1 1060 aa13.61□□□□□ -0.23
RTCB-201ENST00000216038 KTN1Q86UP2 1357 aaKnown RBP13.6□□□□□ -0.23
RTCB-201ENST00000216038 PLEKHG3A1L390 1219 aa13.6□□□□□ -0.23
RTCB-201ENST00000216038 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.6□□□□□ -0.23
RTCB-201ENST00000216038 XPCQ01831 940 aaPredicted RBP13.59□□□□□ -0.23
RTCB-201ENST00000216038 MIER1Q8N108 512 aa13.59□□□□□ -0.23
RTCB-201ENST00000216038 DDX17Q92841 729 aaKnown RBP13.59□□□□□ -0.23
RTCB-201ENST00000216038 SLAIN2Q9P270 581 aa13.59□□□□□ -0.23
RTCB-201ENST00000216038 CPSF1Q10570 1443 aaKnown RBP13.59□□□□□ -0.23
RTCB-201ENST00000216038 FOXO3O43524 673 aa13.59□□□□□ -0.23
RTCB-201ENST00000216038 AKAP12Q02952 1782 aa13.59□□□□□ -0.23
RTCB-201ENST00000216038 ANP32CO43423 234 aa13.57□□□□□ -0.24
RTCB-201ENST00000216038 AMER1Q5JTC6 1135 aaPredicted RBP13.57□□□□□ -0.24
RTCB-201ENST00000216038 MON2Q7Z3U7 1717 aa13.57□□□□□ -0.24
RTCB-201ENST00000216038 POLR3AO14802 1390 aaPredicted RBP13.56□□□□□ -0.24
RTCB-201ENST00000216038 PSME1Q06323 249 aa13.56□□□□□ -0.24
RTCB-201ENST00000216038 BRINP3Q76B58 766 aa13.56□□□□□ -0.24
RTCB-201ENST00000216038 ZNF692Q9BU19 519 aaPredicted RBP13.56□□□□□ -0.24
RTCB-201ENST00000216038 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
RTCB-201ENST00000216038 GGNBP2Q9H3C7 697 aa13.55□□□□□ -0.24
RTCB-201ENST00000216038 USP6P35125 1406 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms