RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 EVA1CP58658 441 aa15.18■□□□□ 0.02
LMCD1-201ENST00000157600 NOL8Q76FK4 1167 aaKnown RBP15.17■□□□□ 0.02
LMCD1-201ENST00000157600 DAPK1P53355 1430 aa15.17■□□□□ 0.02
LMCD1-201ENST00000157600 EXOC6Q8TAG9 804 aa15.17■□□□□ 0.02
LMCD1-201ENST00000157600 ANO2Q9NQ90 1003 aa15.17■□□□□ 0.02
LMCD1-201ENST00000157600 CCDC9Q9Y3X0 531 aaKnown RBP15.17■□□□□ 0.02
LMCD1-201ENST00000157600 CDC45O75419 566 aa15.17■□□□□ 0.02
LMCD1-201ENST00000157600 CREBRFQ8IUR6 639 aa15.17■□□□□ 0.02
LMCD1-201ENST00000157600 VPS53Q5VIR6 699 aa15.17■□□□□ 0.02
LMCD1-201ENST00000157600 VPS37DQ86XT2 251 aa15.17■□□□□ 0.02
LMCD1-201ENST00000157600 LTV1Q96GA3 475 aaPredicted RBP15.17■□□□□ 0.02
LMCD1-201ENST00000157600 C22orf23Q9BZE7 217 aa15.17■□□□□ 0.02
LMCD1-201ENST00000157600 CCDC141Q6ZP82 1450 aa15.16■□□□□ 0.02
LMCD1-201ENST00000157600 FKBP5Q13451 457 aaPredicted RBP15.16■□□□□ 0.02
LMCD1-201ENST00000157600 PDE3AQ14432 1141 aa15.16■□□□□ 0.02
LMCD1-201ENST00000157600 GNAI3P08754 354 aa15.16■□□□□ 0.02
LMCD1-201ENST00000157600 DHX16O60231 1041 aaKnown RBP15.16■□□□□ 0.02
LMCD1-201ENST00000157600 ZNF428Q96B54 188 aa15.15■□□□□ 0.02
LMCD1-201ENST00000157600 PSME1Q06323 249 aa15.15■□□□□ 0.02
LMCD1-201ENST00000157600 KIAA1107Q9UPP5 1409 aa15.15■□□□□ 0.02
LMCD1-201ENST00000157600 RALYLQ86SE5 291 aaKnown RBP15.15■□□□□ 0.02
LMCD1-201ENST00000157600 ERC1Q8IUD2 1116 aa15.15■□□□□ 0.02
LMCD1-201ENST00000157600 C9orf84Q5VXU9 1444 aa15.15■□□□□ 0.02
LMCD1-201ENST00000157600 BICD2Q8TD16 824 aa15.15■□□□□ 0.02
LMCD1-201ENST00000157600 CNTROBQ8N137 903 aa15.15■□□□□ 0.02
LMCD1-201ENST00000157600 MRE11P49959 708 aa15.15■□□□□ 0.02
LMCD1-201ENST00000157600 OSCARQ8IYS5 282 aa15.14■□□□□ 0.01
LMCD1-201ENST00000157600 MINK1Q8N4C8 1332 aaPredicted RBP15.14■□□□□ 0.01
LMCD1-201ENST00000157600 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
LMCD1-201ENST00000157600 AK7Q96M32 723 aa15.14■□□□□ 0.01
LMCD1-201ENST00000157600 CCDC39Q9UFE4 941 aa15.14■□□□□ 0.01
LMCD1-201ENST00000157600 GAS2L2Q8NHY3 880 aa15.14■□□□□ 0.01
LMCD1-201ENST00000157600 MYO6Q9UM54 1294 aa15.13■□□□□ 0.01
LMCD1-201ENST00000157600 RDXP35241 583 aaKnown RBP15.13■□□□□ 0.01
LMCD1-201ENST00000157600 NOM1Q5C9Z4 860 aaKnown RBP15.13■□□□□ 0.01
LMCD1-201ENST00000157600 AEBP2Q6ZN18 517 aaPredicted RBP15.13■□□□□ 0.01
LMCD1-201ENST00000157600 BCL2L13Q9BXK5 485 aa15.13■□□□□ 0.01
LMCD1-201ENST00000157600 FOXD4L1Q9NU39 408 aa15.13■□□□□ 0.01
LMCD1-201ENST00000157600 KIF14Q15058 1648 aa15.13■□□□□ 0.01
LMCD1-201ENST00000157600 MAP3K1Q13233 1512 aa15.13■□□□□ 0.01
LMCD1-201ENST00000157600 HMGB2P26583 209 aaKnown RBP15.12■□□□□ 0.01
LMCD1-201ENST00000157600 SART3Q15020 963 aaKnown RBP15.12■□□□□ 0.01
LMCD1-201ENST00000157600 RABEP1Q15276 862 aa15.12■□□□□ 0.01
LMCD1-201ENST00000157600 GCC1Q96CN9 775 aa15.12■□□□□ 0.01
LMCD1-201ENST00000157600 FAM43AQ8N2R8 423 aa15.12■□□□□ 0.01
LMCD1-201ENST00000157600 ITSN2Q9NZM3 1697 aa15.12■□□□□ 0.01
LMCD1-201ENST00000157600 PIP4K2AP48426 406 aaPredicted RBP15.12■□□□□ 0.01
LMCD1-201ENST00000157600 HOMER1Q86YM7 354 aa15.12■□□□□ 0.01
LMCD1-201ENST00000157600 MRC2Q9UBG0 1479 aa15.12■□□□□ 0.01
LMCD1-201ENST00000157600 APPP05067 770 aa15.12■□□□□ 0.01
LMCD1-201ENST00000157600 CCDC30Q5VVM6 783 aa15.12■□□□□ 0.01
LMCD1-201ENST00000157600 OLFM4Q6UX06 510 aa15.12■□□□□ 0.01
LMCD1-201ENST00000157600 TSPYL4Q9UJ04 414 aa15.11■□□□□ 0.01
LMCD1-201ENST00000157600 RAD54L2Q9Y4B4 1467 aa15.11■□□□□ 0.01
LMCD1-201ENST00000157600 UBTFL1P0CB47 393 aaPredicted RBP15.11■□□□□ 0.01
LMCD1-201ENST00000157600 IQGAP2Q13576 1575 aa15.11■□□□□ 0.01
LMCD1-201ENST00000157600 PLIN1O60240 522 aa15.1■□□□□ 0.01
LMCD1-201ENST00000157600 HMGN5P82970 282 aaKnown RBP15.1■□□□□ 0.01
LMCD1-201ENST00000157600 RUFY1Q96T51 708 aa15.1■□□□□ 0.01
LMCD1-201ENST00000157600 POLA1P09884 1462 aaPredicted RBP15.1■□□□□ 0.01
LMCD1-201ENST00000157600 RAPGEF4Q8WZA2 1011 aa15.1■□□□□ 0.01
LMCD1-201ENST00000157600 GPRASP1Q5JY77 1395 aa15.1■□□□□ 0.01
LMCD1-201ENST00000157600 HSP90B2PQ58FF3 399 aa15.1■□□□□ 0.01
LMCD1-201ENST00000157600 ERCC4Q92889 916 aaPredicted RBP15.1■□□□□ 0.01
LMCD1-201ENST00000157600 CWC22Q9HCG8 908 aaKnown RBP15.1■□□□□ 0.01
LMCD1-201ENST00000157600 ANKRD1Q15327 319 aa15.1■□□□□ 0.01
LMCD1-201ENST00000157600 PTPN23Q9H3S7 1636 aa15.09■□□□□ 0.01
LMCD1-201ENST00000157600 CCDC173Q0VFZ6 552 aa15.09■□□□□ 0.01
LMCD1-201ENST00000157600 NFXL1Q6ZNB6 911 aa15.09■□□□□ 0.01
LMCD1-201ENST00000157600 CCAR2Q8N163 923 aaKnown RBP15.09■□□□□ 0.01
LMCD1-201ENST00000157600 NASPP49321 788 aaPredicted RBP15.09■□□□□ 0.01
LMCD1-201ENST00000157600 TXLNBQ8N3L3 684 aa15.09■□□□□ 0.01
LMCD1-201ENST00000157600 AQRO60306 1485 aaKnown RBP eCLIP15.09■□□□□ 0.01
LMCD1-201ENST00000157600 CLASRPQ8N2M8 674 aaKnown RBP15.09■□□□□ 0.01
LMCD1-201ENST00000157600 NUTM2DQ5VT03 806 aaPredicted RBP15.09■□□□□ 0.01
LMCD1-201ENST00000157600 CTDP1Q9Y5B0 961 aaPredicted RBP15.09■□□□□ 0.01
LMCD1-201ENST00000157600 JMYQ8N9B5 988 aa15.08■□□□□ 0
LMCD1-201ENST00000157600 TROQ12816 1431 aaPredicted RBP15.08■□□□□ 0
LMCD1-201ENST00000157600 SRCIN1Q9C0H9 1055 aa15.08■□□□□ 0
LMCD1-201ENST00000157600 PCMTD1Q96MG8 357 aaPredicted RBP15.08■□□□□ 0
LMCD1-201ENST00000157600 CCDC43Q96MW1 224 aaKnown RBP15.08■□□□□ 0
LMCD1-201ENST00000157600 SLC3A2P08195 630 aaKnown RBP15.07■□□□□ 0
LMCD1-201ENST00000157600 ANKRD30BQ9BXX2 1392 aa15.07■□□□□ 0
LMCD1-201ENST00000157600 ARAP1Q96P48 1450 aa15.07■□□□□ 0
LMCD1-201ENST00000157600 ELL2O00472 640 aaPredicted RBP15.07■□□□□ 0
LMCD1-201ENST00000157600 IL27Q8NEV9 243 aa15.06■□□□□ 0
LMCD1-201ENST00000157600 CWC15Q9P013 229 aaKnown RBP15.06■□□□□ 0
LMCD1-201ENST00000157600 LAMC3Q9Y6N6 1575 aa15.06■□□□□ 0
LMCD1-201ENST00000157600 PRXQ9BXM0 1461 aa15.06■□□□□ 0
LMCD1-201ENST00000157600 EIF2S2P20042 333 aaKnown RBP15.06■□□□□ 0
LMCD1-201ENST00000157600 FOXD4L5Q5VV16 416 aaPredicted RBP15.06■□□□□ 0
LMCD1-201ENST00000157600 WDR63Q8IWG1 891 aa15.06■□□□□ 0
LMCD1-201ENST00000157600 FOXD4L4Q8WXT5 416 aaPredicted RBP15.06■□□□□ 0
LMCD1-201ENST00000157600 KINO60870 393 aaKnown RBP15.06■□□□□ 0
LMCD1-201ENST00000157600 RPGRIP1LQ68CZ1 1315 aa15.06■□□□□ 0
LMCD1-201ENST00000157600 VPS37CA5D8V6 355 aaPredicted RBP15.06■□□□□ 0
LMCD1-201ENST00000157600 CCT4P50991 539 aaKnown RBP15.06■□□□□ 0
LMCD1-201ENST00000157600 PNISRQ8TF01 805 aaKnown RBP15.05■□□□□ 0
LMCD1-201ENST00000157600 DCTN1Q14203 1278 aa15.05■□□□□ 0
LMCD1-201ENST00000157600 TBC1D2BQ9UPU7 963 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms