RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 TCP11L2Q8N4U5 519 aa28.25■■■□□ 2.11
TARBP1-201ENST00000040877 ABTB2Q8N961 1025 aa28.25■■■□□ 2.11
TARBP1-201ENST00000040877 VPS53Q5VIR6 699 aa28.25■■■□□ 2.11
TARBP1-201ENST00000040877 PLEKHO1Q53GL0 409 aaPredicted RBP28.24■■■□□ 2.11
TARBP1-201ENST00000040877 WWC1Q8IX03 1113 aa28.24■■■□□ 2.11
TARBP1-201ENST00000040877 TRIM34Q9BYJ4 488 aa28.24■■■□□ 2.11
TARBP1-201ENST00000040877 ANO2Q9NQ90 1003 aa28.24■■■□□ 2.11
TARBP1-201ENST00000040877 UBTFL1P0CB47 393 aaPredicted RBP28.24■■■□□ 2.11
TARBP1-201ENST00000040877 ANKRD30BQ9BXX2 1392 aa28.24■■■□□ 2.11
TARBP1-201ENST00000040877 CPLX1O14810 134 aa28.23■■■□□ 2.11
TARBP1-201ENST00000040877 TPM3P06753 285 aa28.23■■■□□ 2.11
TARBP1-201ENST00000040877 GNAI3P08754 354 aa28.23■■■□□ 2.11
TARBP1-201ENST00000040877 CCDC30Q5VVM6 783 aa28.23■■■□□ 2.11
TARBP1-201ENST00000040877 SMG6Q86US8 1419 aaKnown RBP28.23■■■□□ 2.11
TARBP1-201ENST00000040877 FOXD4L5Q5VV16 416 aaPredicted RBP28.23■■■□□ 2.11
TARBP1-201ENST00000040877 FOXD4L4Q8WXT5 416 aaPredicted RBP28.23■■■□□ 2.11
TARBP1-201ENST00000040877 APPP05067 770 aa28.22■■■□□ 2.11
TARBP1-201ENST00000040877 AMER1Q5JTC6 1135 aaPredicted RBP28.22■■■□□ 2.11
TARBP1-201ENST00000040877 PROSER2Q86WR7 435 aaPredicted RBP28.22■■■□□ 2.11
TARBP1-201ENST00000040877 DAPK1P53355 1430 aa28.22■■■□□ 2.11
TARBP1-201ENST00000040877 NOC3LQ8WTT2 800 aaKnown RBP28.22■■■□□ 2.11
TARBP1-201ENST00000040877 ARID3AQ99856 593 aa28.22■■■□□ 2.11
TARBP1-201ENST00000040877 SUPT6HQ7KZ85 1726 aaKnown RBP28.22■■■□□ 2.11
TARBP1-201ENST00000040877 POGZQ7Z3K3 1410 aa28.21■■■□□ 2.11
TARBP1-201ENST00000040877 GOLGA6L19H0YKK7 550 aa28.2■■■□□ 2.1
TARBP1-201ENST00000040877 TPD52L1Q16890 204 aaPredicted RBP28.19■■■□□ 2.1
TARBP1-201ENST00000040877 ESCO1Q5FWF5 840 aa28.19■■■□□ 2.1
TARBP1-201ENST00000040877 RSPH6AQ9H0K4 717 aa28.19■■■□□ 2.1
TARBP1-201ENST00000040877 FANCIQ9NVI1 1328 aa28.18■■■□□ 2.1
TARBP1-201ENST00000040877 NUTM2GQ5VZR2 741 aa28.18■■■□□ 2.1
TARBP1-201ENST00000040877 MCTP1Q6DN14 999 aa28.18■■■□□ 2.1
TARBP1-201ENST00000040877 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
TARBP1-201ENST00000040877 BECN2A8MW95 431 aa28.18■■■□□ 2.1
TARBP1-201ENST00000040877 CREBRFQ8IUR6 639 aa28.18■■■□□ 2.1
TARBP1-201ENST00000040877 NBPF1Q3BBV0 1214 aa28.17■■■□□ 2.1
TARBP1-201ENST00000040877 PRKAR2BP31323 418 aa28.17■■■□□ 2.1
TARBP1-201ENST00000040877 TSR1Q2NL82 804 aaKnown RBP28.16■■■□□ 2.1
TARBP1-201ENST00000040877 CHMP5Q9NZZ3 219 aa28.16■■■□□ 2.1
TARBP1-201ENST00000040877 TPM2P07951 284 aa28.16■■■□□ 2.1
TARBP1-201ENST00000040877 ERICH2A1L162 156 aa28.15■■■□□ 2.1
TARBP1-201ENST00000040877 CEP89Q96ST8 783 aa28.15■■■□□ 2.1
TARBP1-201ENST00000040877 LNPKQ9C0E8 428 aa28.15■■■□□ 2.1
TARBP1-201ENST00000040877 TPM1P09493 284 aa28.14■■■□□ 2.1
TARBP1-201ENST00000040877 CCDC47Q96A33 483 aaKnown RBP28.14■■■□□ 2.1
TARBP1-201ENST00000040877 HSP90AA2PQ14568 343 aaPredicted RBP28.14■■■□□ 2.09
TARBP1-201ENST00000040877 ATAD2Q6PL18 1390 aa28.13■■■□□ 2.09
TARBP1-201ENST00000040877 CDK19Q9BWU1 502 aa28.13■■■□□ 2.09
TARBP1-201ENST00000040877 NINLQ9Y2I6 1382 aa28.13■■■□□ 2.09
TARBP1-201ENST00000040877 CDC45O75419 566 aa28.13■■■□□ 2.09
TARBP1-201ENST00000040877 NUCB2P80303 420 aa28.13■■■□□ 2.09
TARBP1-201ENST00000040877 RBM33Q96EV2 1170 aaKnown RBP28.13■■■□□ 2.09
TARBP1-201ENST00000040877 CT47B1P0C2W7 299 aaPredicted RBP28.12■■■□□ 2.09
TARBP1-201ENST00000040877 AIMP1Q12904 312 aaKnown RBP28.12■■■□□ 2.09
TARBP1-201ENST00000040877 EPRSP07814 1512 aaKnown RBP28.12■■■□□ 2.09
TARBP1-201ENST00000040877 LAMC3Q9Y6N6 1575 aa28.12■■■□□ 2.09
TARBP1-201ENST00000040877 PNISRQ8TF01 805 aaKnown RBP28.12■■■□□ 2.09
TARBP1-201ENST00000040877 PANK1Q8TE04 598 aa28.12■■■□□ 2.09
TARBP1-201ENST00000040877 AEBP2Q6ZN18 517 aaPredicted RBP28.11■■■□□ 2.09
TARBP1-201ENST00000040877 HOOK1Q9UJC3 728 aaKnown RBP28.11■■■□□ 2.09
TARBP1-201ENST00000040877 CLASRPQ8N2M8 674 aaKnown RBP28.11■■■□□ 2.09
TARBP1-201ENST00000040877 CTDP1Q9Y5B0 961 aaPredicted RBP28.11■■■□□ 2.09
TARBP1-201ENST00000040877 RTEL1-TNFRSF6BF6WH68 1400 aa28.1■■■□□ 2.09
TARBP1-201ENST00000040877 ERBINQ96RT1 1412 aa28.1■■■□□ 2.09
TARBP1-201ENST00000040877 GSE1Q14687 1217 aa28.1■■■□□ 2.09
TARBP1-201ENST00000040877 TATP17735 454 aaPredicted RBP28.1■■■□□ 2.09
TARBP1-201ENST00000040877 PDE3AQ14432 1141 aa28.09■■■□□ 2.09
TARBP1-201ENST00000040877 SLC12A5Q9H2X9 1139 aa28.09■■■□□ 2.09
TARBP1-201ENST00000040877 IQGAP2Q13576 1575 aa28.09■■■□□ 2.09
TARBP1-201ENST00000040877 NEUROD6Q96NK8 337 aa28.09■■■□□ 2.09
TARBP1-201ENST00000040877 ANKLE2Q86XL3 938 aa28.09■■■□□ 2.09
TARBP1-201ENST00000040877 SMC3Q9UQE7 1217 aa28.09■■■□□ 2.09
TARBP1-201ENST00000040877 RALYLQ86SE5 291 aaKnown RBP28.08■■■□□ 2.09
TARBP1-201ENST00000040877 NFXL1Q6ZNB6 911 aa28.08■■■□□ 2.09
TARBP1-201ENST00000040877 TWISTNBQ3B726 338 aaPredicted RBP28.08■■■□□ 2.09
TARBP1-201ENST00000040877 PES1O00541 588 aaKnown RBP28.07■■■□□ 2.08
TARBP1-201ENST00000040877 C22orf23Q9BZE7 217 aa28.07■■■□□ 2.08
TARBP1-201ENST00000040877 CABP1Q9NZU7 370 aa28.07■■■□□ 2.08
TARBP1-201ENST00000040877 NBPF8Q3BBV2 869 aa28.06■■■□□ 2.08
TARBP1-201ENST00000040877 CNTROBQ8N137 903 aa28.06■■■□□ 2.08
TARBP1-201ENST00000040877 SLC4A3P48751 1232 aa28.06■■■□□ 2.08
TARBP1-201ENST00000040877 TCEAL9Q9UHQ7 104 aa28.06■■■□□ 2.08
TARBP1-201ENST00000040877 CCDC141Q6ZP82 1450 aa28.06■■■□□ 2.08
TARBP1-201ENST00000040877 NCBP3Q53F19 620 aaKnown RBP28.06■■■□□ 2.08
TARBP1-201ENST00000040877 EXOSC9Q06265 439 aaKnown RBP28.05■■■□□ 2.08
TARBP1-201ENST00000040877 SAFBQ15424 915 aaKnown RBP eCLIP28.05■■■□□ 2.083e-6■□□□□ 11
TARBP1-201ENST00000040877 ERC1Q8IUD2 1116 aa28.05■■■□□ 2.08
TARBP1-201ENST00000040877 ANKRD20A12PQ8NF67 263 aa28.05■■■□□ 2.08
TARBP1-201ENST00000040877 RAPGEF3O95398 923 aa28.05■■■□□ 2.08
TARBP1-201ENST00000040877 GOLGA6L1Q8N7Z2 621 aa28.05■■■□□ 2.08
TARBP1-201ENST00000040877 WDR63Q8IWG1 891 aa28.04■■■□□ 2.08
TARBP1-201ENST00000040877 DHX16O60231 1041 aaKnown RBP28.04■■■□□ 2.08
TARBP1-201ENST00000040877 PSMA5P28066 241 aa28.04■■■□□ 2.08
TARBP1-201ENST00000040877 CUL7Q14999 1698 aa28.03■■■□□ 2.08
TARBP1-201ENST00000040877 HIP1O00291 1037 aa28.03■■■□□ 2.08
TARBP1-201ENST00000040877 GCC1Q96CN9 775 aa28.03■■■□□ 2.08
TARBP1-201ENST00000040877 KIF6Q6ZMV9 814 aa28.02■■■□□ 2.08
TARBP1-201ENST00000040877 MAGI1Q96QZ7 1491 aaPredicted RBP28.02■■■□□ 2.08
TARBP1-201ENST00000040877 WASHC4Q2M389 1173 aa28.02■■■□□ 2.08
TARBP1-201ENST00000040877 FOXD4L6Q3SYB3 417 aaPredicted RBP28.01■■■□□ 2.07
TARBP1-201ENST00000040877 FOXD4L3Q6VB84 417 aaPredicted RBP28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms