RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 APC1P53886 1748 aa-4.05□□□□□ -3.06
snR56snR56 CUP1-1P0CX80 61 aa-4.06□□□□□ -3.06
snR56snR56 CUP1-2P0CX81 61 aa-4.06□□□□□ -3.06
snR56snR56 YMR090WQ04304 227 aaKnown RBP-4.06□□□□□ -3.06
snR56snR56 YDR119W-AQ2V2P9 66 aa-4.06□□□□□ -3.06
snR56snR56 QCR6P00127 147 aa-4.07□□□□□ -3.06
snR56snR56 YER039C-AP0CD97 72 aa-4.08□□□□□ -3.06
snR56snR56 NUM1Q00402 2748 aa-4.08□□□□□ -3.06
snR56snR56 YIL156W-BQ2V2P4 73 aa-4.09□□□□□ -3.06
snR56snR56 COA2Q3E823 68 aa-4.09□□□□□ -3.06
snR56snR56 FYV7Q12247 151 aa-4.1□□□□□ -3.07
snR56snR56 YGL258W-AQ3E740 77 aa-4.11□□□□□ -3.07
snR56snR56 YBR200W-AQ3E755 54 aa-4.12□□□□□ -3.07
snR56snR56 KSH1Q8TGJ3 72 aa-4.12□□□□□ -3.07
snR56snR56 RPS27BP38711 82 aa-4.13□□□□□ -3.07
snR56snR56 KOG1P38873 1557 aa-4.14□□□□□ -3.07
snR56snR56 YOR072W-BQ3E832 53 aa-4.15□□□□□ -3.07
snR56snR56 SPP41P38904 1435 aa-4.15□□□□□ -3.07
snR56snR56 GEA1P47102 1408 aaPredicted RBP-4.15□□□□□ -3.07
snR56snR56 RPA190P10964 1664 aaKnown RBP-4.16□□□□□ -3.07
snR56snR56 CSF1Q12150 2958 aa-4.18□□□□□ -3.08
snR56snR56 YDL022C-AP0C5L6 82 aa-4.18□□□□□ -3.08
snR56snR56 HAP1P0CE41 1502 aa-4.19□□□□□ -3.08
snR56snR56 YLR146W-AQ2V2P1 62 aa-4.19□□□□□ -3.08
snR56snR56 YOR011W-AQ3E807 68 aa-4.19□□□□□ -3.08
snR56snR56 VPS15P22219 1454 aa-4.19□□□□□ -3.08
snR56snR56 YDR042CQ03205 200 aa-4.2□□□□□ -3.08
snR56snR56 MHF2Q3E829 80 aa-4.2□□□□□ -3.08
snR56snR56 GDB1Q06625 1536 aa-4.23□□□□□ -3.09
snR56snR56 FIG2P25653 1609 aa-4.24□□□□□ -3.09
snR56snR56 TRA1P38811 3744 aa-4.25□□□□□ -3.09
snR56snR56 ATP17Q06405 101 aa-4.26□□□□□ -3.09
snR56snR56 YGR146C-AQ8TGT9 53 aa-4.28□□□□□ -3.09
snR56snR56 REV3P14284 1504 aa-4.3□□□□□ -3.1
snR56snR56 PDR10P51533 1564 aa-4.3□□□□□ -3.1
snR56snR56 YBL039W-BP0C268 59 aa-4.3□□□□□ -3.1
snR56snR56 WIP1Q2V2P8 89 aa-4.33□□□□□ -3.1
snR56snR56 Q0017Q9ZZX8 53 aa-4.33□□□□□ -3.1
snR56snR56 YPL225WQ08971 146 aaKnown RBP-4.34□□□□□ -3.1
snR56snR56 MSL1P40567 111 aaPredicted RBP-4.35□□□□□ -3.11
snR56snR56 SUS1Q6WNK7 96 aa-4.35□□□□□ -3.11
snR56snR56 GEA2P39993 1459 aaKnown RBP-4.37□□□□□ -3.11
snR56snR56 YOR105WQ08504 108 aa-4.38□□□□□ -3.11
snR56snR56 TSC11P40061 1430 aa-4.38□□□□□ -3.11
snR56snR56 SIN3P22579 1536 aa-4.39□□□□□ -3.11
snR56snR56 YOR314WQ12506 109 aa-4.39□□□□□ -3.11
snR56snR56 SWR1Q05471 1514 aa-4.41□□□□□ -3.12
snR56snR56 THO2P53552 1597 aaKnown RBP-4.46□□□□□ -3.12
snR56snR56 YOR304C-AO14468 76 aa-4.48□□□□□ -3.13
snR56snR56 RPS12P48589 143 aaKnown RBP-4.48□□□□□ -3.13
snR56snR56 YKL065W-AQ2V2P2 73 aa-4.48□□□□□ -3.13
snR56snR56 IRA2P19158 3079 aa-4.49□□□□□ -3.13
snR56snR56 FKS3Q04952 1785 aa-4.5□□□□□ -3.13
snR56snR56 YMR175W-AQ3E766 64 aa-4.5□□□□□ -3.13
snR56snR56 YOR032W-AQ8TGS1 66 aa-4.5□□□□□ -3.13
snR56snR56 IRA1P18963 3092 aa-4.51□□□□□ -3.13
snR56snR56 YMR082CQ04276 118 aa-4.51□□□□□ -3.13
snR56snR56 YBR230W-AQ3E762 66 aa-4.54□□□□□ -3.14
snR56snR56 SPI1P40092 148 aa-4.56□□□□□ -3.14
snR56snR56 YOR192C-CQ3E736 78 aa-4.56□□□□□ -3.14
snR56snR56 YGR121W-AQ3E816 71 aa-4.59□□□□□ -3.14
snR56snR56 YGR035W-AQ45U48 73 aa-4.6□□□□□ -3.15
snR56snR56 YPR145C-AQ2V2P0 78 aa-4.62□□□□□ -3.15
snR56snR56 QCR9P22289 66 aa-4.65□□□□□ -3.15
snR56snR56 DNF1P32660 1571 aa-4.65□□□□□ -3.15
snR56snR56 YSP2Q06681 1438 aa-4.67□□□□□ -3.16
snR56snR56 YER137CP40083 148 aaKnown RBP-4.69□□□□□ -3.16
snR56snR56 YGL194C-AQ2V2P6 80 aa-4.69□□□□□ -3.16
snR56snR56 TIM12P32830 109 aa-4.7□□□□□ -3.16
snR56snR56 YML054C-AQ3E809 52 aa-4.7□□□□□ -3.16
snR56snR56 SSS1P35179 80 aa-4.72□□□□□ -3.17
snR56snR56 MDS3P53094 1487 aa-4.73□□□□□ -3.17
snR56snR56 PAU7P39545 55 aa-4.75□□□□□ -3.17
snR56snR56 SWM2P40342 146 aa-4.75□□□□□ -3.17
snR56snR56 MMS22Q06164 1454 aa-4.75□□□□□ -3.17
snR56snR56 HUB1Q6Q546 73 aa-4.77□□□□□ -3.17
snR56snR56 YCL001W-BQ96VH2 84 aa-4.77□□□□□ -3.17
snR56snR56 SNQ2P32568 1501 aaKnown RBP-4.77□□□□□ -3.17
snR56snR56 PDR12Q02785 1511 aa-4.78□□□□□ -3.17
snR56snR56 ARO1P08566 1588 aaKnown RBP-4.78□□□□□ -3.18
snR56snR56 TY1B-DR4Q07793 1604 aa-4.86□□□□□ -3.19
snR56snR56 PDR15Q04182 1529 aaKnown RBP-4.87□□□□□ -3.19
snR56snR56 RPL29P05747 59 aaPredicted RBP-4.88□□□□□ -3.19
snR56snR56 YOR093CQ12275 1648 aa-4.9□□□□□ -3.19
snR56snR56 YDR034C-AP0C289 58 aa-4.92□□□□□ -3.2
snR56snR56 MLP1Q02455 1875 aaKnown RBP-4.94□□□□□ -3.2
snR56snR56 YCR075W-AQ3E830 75 aa-4.95□□□□□ -3.2
snR56snR56 YLR157W-DP0CE99 70 aa-4.96□□□□□ -3.2
snR56snR56 ERI1P62651 68 aaKnown RBP-4.96□□□□□ -3.2
snR56snR56 RPS30AP0CX33 63 aaKnown RBP-4.98□□□□□ -3.21
snR56snR56 RPS30BP0CX34 63 aaKnown RBP-4.98□□□□□ -3.21
snR56snR56 DNF2Q12675 1612 aa-4.98□□□□□ -3.21
snR56snR56 RRP5Q05022 1729 aaKnown RBP-4.99□□□□□ -3.21
snR56snR56 CWP2P43497 92 aa-4.99□□□□□ -3.21
snR56snR56 LTE1P07866 1435 aa-4.99□□□□□ -3.21
snR56snR56 IQG1Q12280 1495 aa-5□□□□□ -3.21
snR56snR56 YMR105W-AQ8TGS8 64 aa-5.01□□□□□ -3.21
snR56snR56 FLO1P32768 1537 aa-5.02□□□□□ -3.21
snR56snR56 VPS13Q07878 3144 aa-5.03□□□□□ -3.22
snR56snR56 YOR316C-AQ3E806 69 aa-5.06□□□□□ -3.22
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms