RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C RIM15P43565 1770 aa2.05□□□□□ -2.08
LCB4YOR171C YDL022C-AP0C5L6 82 aa2.05□□□□□ -2.08
LCB4YOR171C YGL041C-BQ3E750 60 aa2.05□□□□□ -2.08
LCB4YOR171C COA3Q3E7B2 85 aa2.05□□□□□ -2.08
LCB4YOR171C APC1P53886 1748 aa2.05□□□□□ -2.08
LCB4YOR171C YBR032WP38223 100 aa2.04□□□□□ -2.08
LCB4YOR171C DSE2P38844 325 aa2.04□□□□□ -2.08
LCB4YOR171C VAM10Q08474 114 aa2.04□□□□□ -2.08
LCB4YOR171C YOR032W-AQ8TGS1 66 aa2.03□□□□□ -2.08
LCB4YOR171C STT4P37297 1900 aa2.03□□□□□ -2.08
LCB4YOR171C YEL008WP40001 126 aa2.03□□□□□ -2.09
LCB4YOR171C YDR182W-AQ3E796 67 aa2.03□□□□□ -2.09
LCB4YOR171C YKL018C-AQ3E7A7 99 aa2.03□□□□□ -2.09
LCB4YOR171C YNL042W-BQ3E7Z2 85 aa2.03□□□□□ -2.09
LCB4YOR171C ACC1Q00955 2233 aaKnown RBP2.03□□□□□ -2.09
LCB4YOR171C MOT1P32333 1867 aa2.02□□□□□ -2.09
LCB4YOR171C SNF2P22082 1703 aa2.02□□□□□ -2.09
LCB4YOR171C EDC1P53080 175 aaPredicted RBP2.01□□□□□ -2.09
LCB4YOR171C DNF3Q12674 1656 aa2.01□□□□□ -2.09
LCB4YOR171C YBR219CP38317 127 aa2.01□□□□□ -2.09
LCB4YOR171C YOR192C-CQ3E736 78 aa2.01□□□□□ -2.09
LCB4YOR171C SLH1P53327 1967 aaKnown RBP2□□□□□ -2.09
LCB4YOR171C RPS30AP0CX33 63 aaKnown RBP2□□□□□ -2.09
LCB4YOR171C RPS30BP0CX34 63 aaKnown RBP2□□□□□ -2.09
LCB4YOR171C YOR034C-AQ3E735 80 aa2□□□□□ -2.09
LCB4YOR171C AGA2P32781 87 aa1.99□□□□□ -2.09
LCB4YOR171C YGR240C-AQ3E786 66 aa1.99□□□□□ -2.09
LCB4YOR171C YLR255CO13574 117 aa1.99□□□□□ -2.09
LCB4YOR171C YOL166W-AQ8TGJ1 51 aa1.99□□□□□ -2.09
LCB4YOR171C FAB1P34756 2278 aa1.99□□□□□ -2.09
LCB4YOR171C BRR2P32639 2163 aaKnown RBP1.99□□□□□ -2.09
LCB4YOR171C YCR001WP25347 104 aa1.98□□□□□ -2.09
LCB4YOR171C YNL190WP53872 204 aa1.98□□□□□ -2.09
LCB4YOR171C YMR122W-AQ3E842 84 aa1.98□□□□□ -2.09
LCB4YOR171C AQY2P0CD90 149 aa1.97□□□□□ -2.09
LCB4YOR171C MGR2Q02889 113 aa1.97□□□□□ -2.09
LCB4YOR171C ATP17Q06405 101 aa1.97□□□□□ -2.09
LCB4YOR171C HUB1Q6Q546 73 aa1.96□□□□□ -2.1
LCB4YOR171C YCL042WP25572 119 aa1.95□□□□□ -2.1
LCB4YOR171C YNL122CP53921 115 aaPredicted RBP1.94□□□□□ -2.1
LCB4YOR171C SGF11Q03067 99 aa1.94□□□□□ -2.1
LCB4YOR171C YBR201C-AQ2V2Q3 67 aa1.94□□□□□ -2.1
LCB4YOR171C LCL1Q02786 101 aa1.92□□□□□ -2.1
LCB4YOR171C YMR007WQ03675 126 aa1.92□□□□□ -2.1
LCB4YOR171C YIL086CP40503 102 aa1.92□□□□□ -2.1
LCB4YOR171C YNL146C-AQ3E7Z1 64 aa1.92□□□□□ -2.1
LCB4YOR171C SHU1P38751 150 aa1.91□□□□□ -2.1
LCB4YOR171C YJL009WP47078 108 aa1.91□□□□□ -2.1
LCB4YOR171C ATP18P81450 59 aa1.91□□□□□ -2.1
LCB4YOR171C YLR146W-AQ2V2P1 62 aa1.9□□□□□ -2.1
LCB4YOR171C Q0032Q9ZZX7 96 aa1.9□□□□□ -2.1
LCB4YOR171C MVB12P42939 101 aa1.9□□□□□ -2.11
LCB4YOR171C SDH6Q3E785 79 aa1.89□□□□□ -2.11
LCB4YOR171C YOL097W-AQ3E7Y9 61 aa1.89□□□□□ -2.11
LCB4YOR171C URB1P34241 1764 aaKnown RBP1.89□□□□□ -2.11
LCB4YOR171C YPR096CO13587 100 aa1.87□□□□□ -2.11
LCB4YOR171C YMR001C-AQ8TGS9 76 aa1.87□□□□□ -2.11
LCB4YOR171C YJR107C-AP0CT86 78 aa1.86□□□□□ -2.11
LCB4YOR171C BLM10P43583 2143 aa1.86□□□□□ -2.11
LCB4YOR171C BEM2P39960 2167 aaKnown RBP1.86□□□□□ -2.11
LCB4YOR171C YMR141CP40211 102 aa1.86□□□□□ -2.11
LCB4YOR171C YHR086W-AQ3E746 53 aa1.86□□□□□ -2.11
LCB4YOR171C YLR157W-DP0CE99 70 aa1.85□□□□□ -2.11
LCB4YOR171C COX7P10174 60 aa1.84□□□□□ -2.11
LCB4YOR171C YOR072WQ08486 104 aa1.83□□□□□ -2.12
LCB4YOR171C HUG1Q6Q5K6 68 aa1.83□□□□□ -2.12
LCB4YOR171C YBL039W-BP0C268 59 aa1.82□□□□□ -2.12
LCB4YOR171C YPR108W-AQ3E7B3 70 aa1.82□□□□□ -2.12
LCB4YOR171C POL2P21951 2222 aaKnown RBP1.8□□□□□ -2.12
LCB4YOR171C YHR212W-AP0CX91 67 aa1.8□□□□□ -2.12
LCB4YOR171C YJR128WP47162 119 aa1.8□□□□□ -2.12
LCB4YOR171C YBR200W-AQ3E755 54 aa1.8□□□□□ -2.12
LCB4YOR171C SEC16P48415 2195 aaKnown RBP1.8□□□□□ -2.12
LCB4YOR171C YOL013W-AP0C272 63 aaPredicted RBP1.8□□□□□ -2.12
LCB4YOR171C YIL102CP40488 101 aa1.79□□□□□ -2.12
LCB4YOR171C RPL38P49167 78 aaKnown RBP1.79□□□□□ -2.12
LCB4YOR171C YOR011W-AQ3E807 68 aa1.79□□□□□ -2.12
LCB4YOR171C FIG2P25653 1609 aa1.78□□□□□ -2.12
LCB4YOR171C HFA1P32874 2273 aa1.78□□□□□ -2.12
LCB4YOR171C YAR064WP39563 99 aa1.77□□□□□ -2.13
LCB4YOR171C COA2Q3E823 68 aa1.76□□□□□ -2.13
LCB4YOR171C FLO1P32768 1537 aa1.76□□□□□ -2.13
LCB4YOR171C YPR010C-AA5Z2X5 72 aa1.75□□□□□ -2.13
LCB4YOR171C RPC10P40422 70 aa1.75□□□□□ -2.13
LCB4YOR171C TOS6P48560 102 aa1.75□□□□□ -2.13
LCB4YOR171C HHY1P39982 102 aa1.73□□□□□ -2.13
LCB4YOR171C YOR394C-AQ8TGJ0 55 aa1.73□□□□□ -2.13
LCB4YOR171C YGR025WP53216 100 aa1.73□□□□□ -2.13
LCB4YOR171C HKR1P41809 1802 aa1.72□□□□□ -2.13
LCB4YOR171C YFR009W-AP0C5M9 85 aa1.71□□□□□ -2.14
LCB4YOR171C YBR072C-AQ3E794 53 aa1.71□□□□□ -2.14
LCB4YOR171C URA2P07259 2214 aaKnown RBP1.71□□□□□ -2.14
LCB4YOR171C COX9P07255 59 aa1.7□□□□□ -2.14
LCB4YOR171C RPS27AP35997 82 aaKnown RBP1.7□□□□□ -2.14
LCB4YOR171C YBR230W-AQ3E762 66 aa1.68□□□□□ -2.14
LCB4YOR171C OLI1P61829 76 aa1.67□□□□□ -2.14
LCB4YOR171C TOM1Q03280 3268 aa1.67□□□□□ -2.14
LCB4YOR171C AUA1P32450 94 aa1.67□□□□□ -2.14
LCB4YOR171C RPL43AP0CX25 92 aaKnown RBP1.66□□□□□ -2.14
LCB4YOR171C RPL43BP0CX26 92 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms