RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C YNR034W-AQ3E841 98 aa1.68□□□□□ -2.14
HRD1YOL013C TEL1P38110 2787 aa1.68□□□□□ -2.14
HRD1YOL013C YPL038W-AQ3E7B4 63 aa1.67□□□□□ -2.14
HRD1YOL013C TOR2P32600 2474 aaKnown RBP1.67□□□□□ -2.14
HRD1YOL013C YFR010W-AP0C5N0 62 aa1.67□□□□□ -2.14
HRD1YOL013C YHR214C-DP0CX93 97 aa1.67□□□□□ -2.14
HRD1YOL013C MRPL31P14063 131 aaPredicted RBP1.67□□□□□ -2.14
HRD1YOL013C MRX7P53869 86 aa1.67□□□□□ -2.14
HRD1YOL013C MGR2Q02889 113 aa1.67□□□□□ -2.14
HRD1YOL013C YPR145C-AQ2V2P0 78 aa1.67□□□□□ -2.14
HRD1YOL013C YHR213W-AQ8TGT4 77 aa1.67□□□□□ -2.14
HRD1YOL013C LSM2P38203 95 aaKnown RBP1.66□□□□□ -2.14
HRD1YOL013C RPL39P04650 51 aa1.65□□□□□ -2.15
HRD1YOL013C COX9P07255 59 aa1.65□□□□□ -2.15
HRD1YOL013C PAU8P0CE92 120 aa1.64□□□□□ -2.15
HRD1YOL013C PAU11P0CE93 120 aa1.64□□□□□ -2.15
HRD1YOL013C TOM6P33448 61 aa1.64□□□□□ -2.15
HRD1YOL013C PAU13P38725 120 aa1.64□□□□□ -2.15
HRD1YOL013C PAU4P53427 120 aa1.64□□□□□ -2.15
HRD1YOL013C PAU10Q03050 120 aa1.64□□□□□ -2.15
HRD1YOL013C YDR119W-AQ2V2P9 66 aa1.64□□□□□ -2.15
HRD1YOL013C PAU9Q3E770 120 aa1.64□□□□□ -2.15
HRD1YOL013C COA2Q3E823 68 aa1.64□□□□□ -2.15
HRD1YOL013C HUG1Q6Q5K6 68 aa1.64□□□□□ -2.15
HRD1YOL013C RPS11AP0CX47 156 aaKnown RBP1.64□□□□□ -2.15
HRD1YOL013C RPS11BP0CX48 156 aaKnown RBP1.64□□□□□ -2.15
HRD1YOL013C SEN1Q00416 2231 aaKnown RBP1.64□□□□□ -2.15
HRD1YOL013C HUA1P40325 198 aa1.63□□□□□ -2.15
HRD1YOL013C YOR072WQ08486 104 aa1.63□□□□□ -2.15
HRD1YOL013C SIP18P50263 79 aa1.62□□□□□ -2.15
HRD1YOL013C COX12Q01519 83 aa1.62□□□□□ -2.15
HRD1YOL013C YLR146W-AQ2V2P1 62 aa1.62□□□□□ -2.15
HRD1YOL013C VMA9Q3E7B6 73 aa1.62□□□□□ -2.15
HRD1YOL013C MVB12P42939 101 aa1.61□□□□□ -2.15
HRD1YOL013C YDR381C-AQ3E6R5 114 aa1.61□□□□□ -2.15
HRD1YOL013C CUP1-1P0CX80 61 aa1.61□□□□□ -2.15
HRD1YOL013C CUP1-2P0CX81 61 aa1.61□□□□□ -2.15
HRD1YOL013C YMR007WQ03675 126 aa1.61□□□□□ -2.15
HRD1YOL013C YPR108W-AQ3E7B3 70 aa1.61□□□□□ -2.15
HRD1YOL013C YMR105W-AQ8TGS8 64 aa1.61□□□□□ -2.15
HRD1YOL013C PAU1P0CE88 120 aa1.6□□□□□ -2.15
HRD1YOL013C PAU14P0CE89 120 aa1.6□□□□□ -2.15
HRD1YOL013C AIM19P40502 157 aa1.6□□□□□ -2.15
HRD1YOL013C YOR032W-AQ8TGS1 66 aa1.6□□□□□ -2.15
HRD1YOL013C MPC2P38857 129 aa1.59□□□□□ -2.15
HRD1YOL013C YGR025WP53216 100 aa1.59□□□□□ -2.15
HRD1YOL013C BSC4P53841 131 aa1.59□□□□□ -2.15
HRD1YOL013C COX19Q3E731 98 aa1.59□□□□□ -2.15
HRD1YOL013C BPH1P25356 2167 aa1.59□□□□□ -2.16
HRD1YOL013C YER188C-AP0C0V2 99 aa1.58□□□□□ -2.16
HRD1YOL013C YHR173CP38864 112 aa1.58□□□□□ -2.16
HRD1YOL013C HHY1P39982 102 aa1.58□□□□□ -2.16
HRD1YOL013C YIL102CP40488 101 aa1.58□□□□□ -2.16
HRD1YOL013C PAU20Q08322 120 aa1.58□□□□□ -2.16
HRD1YOL013C YDR010CQ12426 110 aa1.58□□□□□ -2.16
HRD1YOL013C YIL156W-BQ2V2P4 73 aa1.58□□□□□ -2.16
HRD1YOL013C SHU1P38751 150 aa1.57□□□□□ -2.16
HRD1YOL013C YJR128WP47162 119 aa1.57□□□□□ -2.16
HRD1YOL013C TOM7P53507 60 aa1.57□□□□□ -2.16
HRD1YOL013C GCN1P33892 2672 aaKnown RBP1.57□□□□□ -2.16
HRD1YOL013C PRP8P33334 2413 aaKnown RBP1.56□□□□□ -2.16
HRD1YOL013C PAI3P01094 68 aa1.56□□□□□ -2.16
HRD1YOL013C PAU23Q07987 124 aa1.56□□□□□ -2.16
HRD1YOL013C PAU17Q12370 124 aa1.56□□□□□ -2.16
HRD1YOL013C RPL43AP0CX25 92 aaKnown RBP1.55□□□□□ -2.16
HRD1YOL013C RPL43BP0CX26 92 aa1.55□□□□□ -2.16
HRD1YOL013C YMR141CP40211 102 aa1.55□□□□□ -2.16
HRD1YOL013C YOR314WQ12506 109 aa1.55□□□□□ -2.16
HRD1YOL013C NOP10Q6Q547 58 aaPredicted RBP1.55□□□□□ -2.16
HRD1YOL013C Q0297Q9ZZV8 51 aa1.55□□□□□ -2.16
HRD1YOL013C YBR292CP38357 123 aa1.55□□□□□ -2.16
HRD1YOL013C DYN1P36022 4092 aa1.54□□□□□ -2.16
HRD1YOL013C YGR121W-AQ3E816 71 aa1.54□□□□□ -2.16
HRD1YOL013C SWM2P40342 146 aa1.53□□□□□ -2.16
HRD1YOL013C QCR9P22289 66 aa1.52□□□□□ -2.17
HRD1YOL013C YOR105WQ08504 108 aa1.52□□□□□ -2.17
HRD1YOL013C TOR1P35169 2470 aa1.52□□□□□ -2.17
HRD1YOL013C YAL065CO13511 128 aa1.51□□□□□ -2.17
HRD1YOL013C FPR2P32472 135 aa1.51□□□□□ -2.17
HRD1YOL013C SSS1P35179 80 aa1.51□□□□□ -2.17
HRD1YOL013C YGL258W-AQ3E740 77 aa1.51□□□□□ -2.17
HRD1YOL013C YIL134C-AQ45U18 67 aa1.51□□□□□ -2.17
HRD1YOL013C MEC1P38111 2368 aa1.51□□□□□ -2.17
HRD1YOL013C YKL065W-AQ2V2P2 73 aa1.51□□□□□ -2.17
HRD1YOL013C URA2P07259 2214 aaKnown RBP1.5□□□□□ -2.17
HRD1YOL013C YNL042W-BQ3E7Z2 85 aa1.5□□□□□ -2.17
HRD1YOL013C YMR122W-AQ3E842 84 aa1.5□□□□□ -2.17
HRD1YOL013C YHR213W-BQ8TGK1 99 aa1.5□□□□□ -2.17
HRD1YOL013C NUM1Q00402 2748 aa1.5□□□□□ -2.17
HRD1YOL013C YDL022C-AP0C5L6 82 aa1.49□□□□□ -2.17
HRD1YOL013C YOR011W-AQ3E807 68 aa1.49□□□□□ -2.17
HRD1YOL013C AUA1P32450 94 aa1.48□□□□□ -2.17
HRD1YOL013C ATX1P38636 73 aa1.48□□□□□ -2.17
HRD1YOL013C YBR201C-AQ2V2Q3 67 aa1.48□□□□□ -2.17
HRD1YOL013C YOR034C-AQ3E735 80 aa1.48□□□□□ -2.17
HRD1YOL013C YGR035W-AQ45U48 73 aa1.48□□□□□ -2.17
HRD1YOL013C HOR7Q05827 59 aa1.47□□□□□ -2.17
HRD1YOL013C YFL041W-AQ3E817 63 aa1.47□□□□□ -2.17
HRD1YOL013C Q0032Q9ZZX7 96 aa1.47□□□□□ -2.17
HRD1YOL013C RPL37AP49166 88 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms