RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	CMC4	Q3E7A9	73 aa		0.51	□□□□□ -2.33
YCS4	YLR272C	ECM12	O13529	151 aa		0.51	□□□□□ -2.33
YCS4	YLR272C	CUP1-1	P0CX80	61 aa		0.51	□□□□□ -2.33
YCS4	YLR272C	CUP1-2	P0CX81	61 aa		0.51	□□□□□ -2.33
YCS4	YLR272C	LSM6	Q06406	86 aa	Known RBP	0.51	□□□□□ -2.33
YCS4	YLR272C	YGR121W-A	Q3E816	71 aa		0.51	□□□□□ -2.33
YCS4	YLR272C	FAS1	P07149	2051 aa	Known RBP	0.51	□□□□□ -2.33
YCS4	YLR272C	UGX2	P32772	223 aa		0.51	□□□□□ -2.33
YCS4	YLR272C	LSM2	P38203	95 aa	Known RBP	0.51	□□□□□ -2.33
YCS4	YLR272C	HUR1	P45820	110 aa		0.51	□□□□□ -2.33
YCS4	YLR272C	HPA2	Q06592	156 aa		0.51	□□□□□ -2.33
YCS4	YLR272C	YOL118C	Q08259	102 aa		0.51	□□□□□ -2.33
YCS4	YLR272C	YOR304C-A	O14468	76 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	RPA12	P32529	125 aa	Known RBP	0.5	□□□□□ -2.33
YCS4	YLR272C	LCL1	Q02786	101 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	YMR103C	Q04436	120 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	WIP1	Q2V2P8	89 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	YNL042W-B	Q3E7Z2	85 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	FAB1	P34756	2278 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	AQY2	P0CD90	149 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	RPL14A	P36105	138 aa	Known RBP	0.5	□□□□□ -2.33
YCS4	YLR272C	YSY6	P38374	65 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	RPL14B	P38754	138 aa	Known RBP	0.5	□□□□□ -2.33
YCS4	YLR272C	YIL163C	P40448	117 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	YLR162W	Q06235	118 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	YPL261C	Q08976	102 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	YAL065C	O13511	128 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	YDL022C-A	P0C5L6	82 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	YCR050C	P25630	102 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	YHL042W	P38729	150 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	YEL008W	P40001	126 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	MVB12	P42939	101 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	MRPS12	P53732	153 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	ATP18	P81450	59 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	DDR2	P89113	61 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	YDR182W-A	Q3E796	67 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	YOL097W-A	Q3E7Y9	61 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	YLL006W-A	Q3E814	58 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	YIL134C-A	Q45U18	67 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	Q0032	Q9ZZX7	96 aa		0.5	□□□□□ -2.33
YCS4	YLR272C	DDR48	P18899	430 aa	Known RBP	0.49	□□□□□ -2.33
YCS4	YLR272C	COX23	P38824	151 aa		0.49	□□□□□ -2.33
YCS4	YLR272C	SNU13	P39990	126 aa	Known RBP	0.49	□□□□□ -2.33
YCS4	YLR272C	TDA2	P40045	126 aa		0.49	□□□□□ -2.33
YCS4	YLR272C	TOM7	P53507	60 aa		0.49	□□□□□ -2.33
YCS4	YLR272C	IRC21	Q04772	201 aa		0.49	□□□□□ -2.33
YCS4	YLR272C	NAT5	Q08689	176 aa		0.49	□□□□□ -2.33
YCS4	YLR272C	YOR011W-A	Q3E807	68 aa		0.49	□□□□□ -2.33
YCS4	YLR272C	YFL041W-A	Q3E817	63 aa		0.49	□□□□□ -2.33
YCS4	YLR272C	ACC1	Q00955	2233 aa	Known RBP	0.49	□□□□□ -2.33
YCS4	YLR272C	YLR157W-D	P0CE99	70 aa		0.49	□□□□□ -2.33
YCS4	YLR272C	YDR029W	Q12111	104 aa		0.49	□□□□□ -2.33
YCS4	YLR272C	TAR1	Q8TGM6	124 aa		0.49	□□□□□ -2.33
YCS4	YLR272C	SEN1	Q00416	2231 aa	Known RBP	0.49	□□□□□ -2.33
YCS4	YLR272C	YHR073W-A	P0C5N7	58 aa		0.48	□□□□□ -2.33
YCS4	YLR272C	ATX1	P38636	73 aa		0.48	□□□□□ -2.33
YCS4	YLR272C	YBR230W-A	Q3E762	66 aa		0.48	□□□□□ -2.33
YCS4	YLR272C	YJR107C-A	P0CT86	78 aa		0.48	□□□□□ -2.33
YCS4	YLR272C	COX7	P10174	60 aa		0.48	□□□□□ -2.33
YCS4	YLR272C	TOM6	P33448	61 aa		0.48	□□□□□ -2.33
YCS4	YLR272C	YDR381C-A	Q3E6R5	114 aa		0.48	□□□□□ -2.33
YCS4	YLR272C	YJL127C-B	Q3E828	52 aa		0.48	□□□□□ -2.33
YCS4	YLR272C	YLR255C	O13574	117 aa		0.47	□□□□□ -2.33
YCS4	YLR272C	AUA1	P32450	94 aa		0.47	□□□□□ -2.33
YCS4	YLR272C	EDC1	P53080	175 aa	Predicted RBP	0.47	□□□□□ -2.33
YCS4	YLR272C	YOR314W	Q12506	109 aa		0.47	□□□□□ -2.33
YCS4	YLR272C	YKL065W-A	Q2V2P2	73 aa		0.47	□□□□□ -2.33
YCS4	YLR272C	YLL066W-B	Q8TGJ7	56 aa		0.47	□□□□□ -2.33
YCS4	YLR272C	CDC39	P25655	2108 aa	Known RBP	0.47	□□□□□ -2.33
YCS4	YLR272C	RPL36B	O14455	100 aa	Known RBP	0.47	□□□□□ -2.33
YCS4	YLR272C	RPL36A	P05745	100 aa	Predicted RBP	0.47	□□□□□ -2.33
YCS4	YLR272C	YNL198C	P40166	100 aa		0.47	□□□□□ -2.33
YCS4	YLR272C	OST5	Q92316	86 aa		0.47	□□□□□ -2.33
YCS4	YLR272C	Q0017	Q9ZZX8	53 aa		0.47	□□□□□ -2.33
YCS4	YLR272C	BSC4	P53841	131 aa		0.47	□□□□□ -2.33
YCS4	YLR272C	YPL038W-A	Q3E7B4	63 aa		0.47	□□□□□ -2.33
YCS4	YLR272C	HUB1	Q6Q546	73 aa		0.47	□□□□□ -2.33
YCS4	YLR272C	KSH1	Q8TGJ3	72 aa		0.47	□□□□□ -2.33
YCS4	YLR272C	MDN1	Q12019	4910 aa	Known RBP	0.47	□□□□□ -2.33
YCS4	YLR272C	INO4	P13902	151 aa		0.46	□□□□□ -2.34
YCS4	YLR272C	YAL064W	P39711	94 aa		0.46	□□□□□ -2.34
YCS4	YLR272C	TAO3	P40468	2376 aa		0.46	□□□□□ -2.34
YCS4	YLR272C	YDR034C-A	P0C289	58 aa		0.46	□□□□□ -2.34
YCS4	YLR272C	SNA2	P56508	79 aa		0.46	□□□□□ -2.34
YCS4	YLR272C	YMR122C	Q03879	124 aa		0.46	□□□□□ -2.34
YCS4	YLR272C	POL2	P21951	2222 aa	Known RBP	0.46	□□□□□ -2.34
YCS4	YLR272C	YCR001W	P25347	104 aa		0.46	□□□□□ -2.34
YCS4	YLR272C	YML054C-A	Q3E809	52 aa		0.46	□□□□□ -2.34
YCS4	YLR272C	BEM2	P39960	2167 aa	Known RBP	0.45	□□□□□ -2.34
YCS4	YLR272C	YJL133C-A	Q3E7A3	74 aa		0.45	□□□□□ -2.34
YCS4	YLR272C	MIC10	Q96VH5	97 aa		0.45	□□□□□ -2.34
YCS4	YLR272C	BLM10	P43583	2143 aa		0.45	□□□□□ -2.34
YCS4	YLR272C	YFR009W-A	P0C5M9	85 aa		0.45	□□□□□ -2.34
YCS4	YLR272C	AIM4	P38305	123 aa	Predicted RBP	0.45	□□□□□ -2.34
YCS4	YLR272C	YGR025W	P53216	100 aa		0.45	□□□□□ -2.34
YCS4	YLR272C	SEN15	Q04675	128 aa		0.44	□□□□□ -2.34
YCS4	YLR272C	YDR119W-A	Q2V2P9	66 aa		0.44	□□□□□ -2.34
YCS4	YLR272C	SDH6	Q3E785	79 aa		0.44	□□□□□ -2.34
YCS4	YLR272C	YOR381W-A	Q3E804	55 aa		0.44	□□□□□ -2.34
YCS4	YLR272C	YOR316C-A	Q3E806	69 aa		0.44	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms