RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W YCR095W-AQ3E787 52 aa2.28□□□□□ -2.04
SOF1YLL011W YGR240C-AQ3E786 66 aa2.27□□□□□ -2.05
SOF1YLL011W AUA1P32450 94 aa2.26□□□□□ -2.05
SOF1YLL011W ICY1Q04329 127 aa2.26□□□□□ -2.05
SOF1YLL011W LCL2Q08045 131 aa2.26□□□□□ -2.05
SOF1YLL011W YMR175W-AQ3E766 64 aa2.26□□□□□ -2.05
SOF1YLL011W YDR210WQ03482 75 aa2.26□□□□□ -2.05
SOF1YLL011W HOR7Q05827 59 aa2.26□□□□□ -2.05
SOF1YLL011W YOL013W-AP0C272 63 aaPredicted RBP2.25□□□□□ -2.05
SOF1YLL011W YCR001WP25347 104 aa2.25□□□□□ -2.05
SOF1YLL011W YOR072WQ08486 104 aa2.24□□□□□ -2.05
SOF1YLL011W RPS22BQ3E7Y3 130 aaKnown RBP2.24□□□□□ -2.05
SOF1YLL011W MRPL38P35996 138 aaPredicted RBP2.23□□□□□ -2.05
SOF1YLL011W MGR2Q02889 113 aa2.23□□□□□ -2.05
SOF1YLL011W MRPL31P14063 131 aaPredicted RBP2.22□□□□□ -2.05
SOF1YLL011W PDX3P38075 228 aaKnown RBP2.22□□□□□ -2.05
SOF1YLL011W CWP2P43497 92 aa2.22□□□□□ -2.05
SOF1YLL011W SNA2P56508 79 aa2.21□□□□□ -2.06
SOF1YLL011W YBL071CP38185 102 aa2.2□□□□□ -2.06
SOF1YLL011W COX9P07255 59 aa2.2□□□□□ -2.06
SOF1YLL011W PAU6P0CE90 120 aa2.2□□□□□ -2.06
SOF1YLL011W PAU18P0CE91 120 aa2.2□□□□□ -2.06
SOF1YLL011W YCR085WP25650 117 aa2.2□□□□□ -2.06
SOF1YLL011W MPC2P38857 129 aa2.2□□□□□ -2.06
SOF1YLL011W SPC1P46965 94 aa2.2□□□□□ -2.06
SOF1YLL011W POC4Q12245 148 aaPredicted RBP2.2□□□□□ -2.06
SOF1YLL011W YPL038W-AQ3E7B4 63 aa2.2□□□□□ -2.06
SOF1YLL011W MRP17P28778 131 aa2.19□□□□□ -2.06
SOF1YLL011W YOR192C-CQ3E736 78 aa2.19□□□□□ -2.06
SOF1YLL011W YLR255CO13574 117 aa2.18□□□□□ -2.06
SOF1YLL011W RPA12P32529 125 aaKnown RBP2.17□□□□□ -2.06
SOF1YLL011W YIL102CP40488 101 aa2.17□□□□□ -2.06
SOF1YLL011W LCL1Q02786 101 aa2.17□□□□□ -2.06
SOF1YLL011W HUG1Q6Q5K6 68 aa2.17□□□□□ -2.06
SOF1YLL011W NHP2P32495 156 aaPredicted RBP2.16□□□□□ -2.06
SOF1YLL011W MVB12P42939 101 aa2.15□□□□□ -2.06
SOF1YLL011W MRX7P53869 86 aa2.15□□□□□ -2.06
SOF1YLL011W COX12Q01519 83 aa2.15□□□□□ -2.06
SOF1YLL011W YNR034W-AQ3E841 98 aa2.14□□□□□ -2.07
SOF1YLL011W HUA1P40325 198 aa2.13□□□□□ -2.07
SOF1YLL011W YPR108W-AQ3E7B3 70 aa2.12□□□□□ -2.07
SOF1YLL011W RPS11AP0CX47 156 aaKnown RBP2.11□□□□□ -2.07
SOF1YLL011W RPS11BP0CX48 156 aaKnown RBP2.11□□□□□ -2.07
SOF1YLL011W AIM19P40502 157 aa2.11□□□□□ -2.07
SOF1YLL011W TOM6P33448 61 aa2.09□□□□□ -2.07
SOF1YLL011W YMR007WQ03675 126 aa2.09□□□□□ -2.07
SOF1YLL011W PAU1P0CE88 120 aa2.08□□□□□ -2.08
SOF1YLL011W PAU14P0CE89 120 aa2.08□□□□□ -2.08
SOF1YLL011W PAU8P0CE92 120 aa2.08□□□□□ -2.08
SOF1YLL011W PAU11P0CE93 120 aa2.08□□□□□ -2.08
SOF1YLL011W PAU13P38725 120 aa2.08□□□□□ -2.08
SOF1YLL011W HHY1P39982 102 aa2.08□□□□□ -2.08
SOF1YLL011W PAU10Q03050 120 aa2.08□□□□□ -2.08
SOF1YLL011W PAU9Q3E770 120 aa2.08□□□□□ -2.08
SOF1YLL011W YJR128WP47162 119 aa2.07□□□□□ -2.08
SOF1YLL011W PAU4P53427 120 aa2.07□□□□□ -2.08
SOF1YLL011W SGF11Q03067 99 aa2.07□□□□□ -2.08
SOF1YLL011W PAU20Q08322 120 aa2.07□□□□□ -2.08
SOF1YLL011W COX19Q3E731 98 aa2.07□□□□□ -2.08
SOF1YLL011W YGL258W-AQ3E740 77 aa2.07□□□□□ -2.08
SOF1YLL011W YHR213W-AQ8TGT4 77 aa2.07□□□□□ -2.08
SOF1YLL011W SHU1P38751 150 aa2.06□□□□□ -2.08
SOF1YLL011W BSC4P53841 131 aa2.06□□□□□ -2.08
SOF1YLL011W YPR145C-AQ2V2P0 78 aa2.06□□□□□ -2.08
SOF1YLL011W YOR011W-AQ3E807 68 aa2.06□□□□□ -2.08
SOF1YLL011W YHR213W-BQ8TGK1 99 aa2.05□□□□□ -2.08
SOF1YLL011W LSM2P38203 95 aaKnown RBP2.04□□□□□ -2.08
SOF1YLL011W YDR381C-AQ3E6R5 114 aa2.04□□□□□ -2.08
SOF1YLL011W YBR292CP38357 123 aa2.03□□□□□ -2.08
SOF1YLL011W YDR119W-AQ2V2P9 66 aa2.03□□□□□ -2.08
SOF1YLL011W FPR2P32472 135 aa2.02□□□□□ -2.09
SOF1YLL011W YMR141CP40211 102 aa2.02□□□□□ -2.09
SOF1YLL011W YGR025WP53216 100 aa2.01□□□□□ -2.09
SOF1YLL011W YER188C-AP0C0V2 99 aa2□□□□□ -2.09
SOF1YLL011W YDR010CQ12426 110 aa2□□□□□ -2.09
SOF1YLL011W PAU23Q07987 124 aa1.98□□□□□ -2.09
SOF1YLL011W PAU17Q12370 124 aa1.98□□□□□ -2.09
SOF1YLL011W YOR314WQ12506 109 aa1.98□□□□□ -2.09
SOF1YLL011W YOR034C-AQ3E735 80 aa1.97□□□□□ -2.09
SOF1YLL011W TOM7P53507 60 aa1.96□□□□□ -2.1
SOF1YLL011W YKL065W-AQ2V2P2 73 aa1.96□□□□□ -2.1
SOF1YLL011W PAI3P01094 68 aa1.95□□□□□ -2.1
SOF1YLL011W YHR173CP38864 112 aa1.95□□□□□ -2.1
SOF1YLL011W YOR105WQ08504 108 aa1.95□□□□□ -2.1
SOF1YLL011W COA2Q3E823 68 aa1.95□□□□□ -2.1
SOF1YLL011W SWM2P40342 146 aa1.94□□□□□ -2.1
SOF1YLL011W YIL156W-BQ2V2P4 73 aa1.94□□□□□ -2.1
SOF1YLL011W YNL042W-BQ3E7Z2 85 aa1.94□□□□□ -2.1
SOF1YLL011W NOP10Q6Q547 58 aaPredicted RBP1.94□□□□□ -2.1
SOF1YLL011W YLL066W-BQ8TGJ7 56 aa1.94□□□□□ -2.1
SOF1YLL011W RPL37AP49166 88 aaKnown RBP1.94□□□□□ -2.1
SOF1YLL011W YAL065CO13511 128 aa1.93□□□□□ -2.1
SOF1YLL011W SPI1P40092 148 aa1.93□□□□□ -2.1
SOF1YLL011W YDR034C-AP0C289 58 aa1.92□□□□□ -2.1
SOF1YLL011W YGR121W-AQ3E816 71 aa1.92□□□□□ -2.1
SOF1YLL011W YMR122W-AQ3E842 84 aa1.91□□□□□ -2.1
SOF1YLL011W YLR146W-AQ2V2P1 62 aa1.9□□□□□ -2.11
SOF1YLL011W YBR201C-AQ2V2Q3 67 aa1.9□□□□□ -2.11
SOF1YLL011W Q0032Q9ZZX7 96 aa1.9□□□□□ -2.11
SOF1YLL011W YPR010C-AA5Z2X5 72 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 162.2 ms