RNA–Protein interactions for RNA: YGR271W

SLH1, Transcript of Putative RNA helicase related to Ski2p, yeastyeast

Gene SLH1, Length 5,904 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLH1YGR271W BRR2P32639 2163 aaKnown RBP2.1□□□□□ -2.07
SLH1YGR271W YMR122CQ03879 124 aa2.1□□□□□ -2.07
SLH1YGR271W YHR213WP0CI67 198 aa2.09□□□□□ -2.07
SLH1YGR271W TOS6P48560 102 aa2.09□□□□□ -2.07
SLH1YGR271W YPL080CQ02826 108 aa2.09□□□□□ -2.07
SLH1YGR271W YJR085CP47131 105 aaKnown RBP2.09□□□□□ -2.07
SLH1YGR271W TOM7P53507 60 aa2.09□□□□□ -2.07
SLH1YGR271W YLL006W-AQ3E814 58 aa2.09□□□□□ -2.08
SLH1YGR271W YHR032W-AP0C5N6 59 aa2.08□□□□□ -2.08
SLH1YGR271W COX19Q3E731 98 aa2.08□□□□□ -2.08
SLH1YGR271W TAR1Q8TGM6 124 aa2.08□□□□□ -2.08
SLH1YGR271W YDR034C-AP0C289 58 aa2.08□□□□□ -2.08
SLH1YGR271W YAL067W-AQ8TGK6 75 aa2.08□□□□□ -2.08
SLH1YGR271W NCE101Q02820 53 aa2.08□□□□□ -2.08
SLH1YGR271W TMA10Q06177 86 aa2.07□□□□□ -2.08
SLH1YGR271W YNL146C-AQ3E7Z1 64 aa2.07□□□□□ -2.08
SLH1YGR271W FLO9P39712 1322 aa2.07□□□□□ -2.08
SLH1YGR271W PDR5P33302 1511 aaKnown RBP2.07□□□□□ -2.08
SLH1YGR271W YJL027CP47063 138 aaPredicted RBP2.07□□□□□ -2.08
SLH1YGR271W TOM1Q03280 3268 aa2.07□□□□□ -2.08
SLH1YGR271W HFA1P32874 2273 aa2.07□□□□□ -2.08
SLH1YGR271W YIL086CP40503 102 aa2.07□□□□□ -2.08
SLH1YGR271W CDD1Q06549 142 aa2.07□□□□□ -2.08
SLH1YGR271W YER078W-AQ3E7A2 54 aa2.06□□□□□ -2.08
SLH1YGR271W SEN1Q00416 2231 aaKnown RBP2.06□□□□□ -2.08
SLH1YGR271W YDR524C-BQ3E6R4 66 aa2.06□□□□□ -2.08
SLH1YGR271W YNL190WP53872 204 aa2.06□□□□□ -2.08
SLH1YGR271W RPB9P27999 122 aa2.06□□□□□ -2.08
SLH1YGR271W YAR064WP39563 99 aa2.06□□□□□ -2.08
SLH1YGR271W YML122CQ03207 126 aa2.06□□□□□ -2.08
SLH1YGR271W HUG1Q6Q5K6 68 aa2.06□□□□□ -2.08
SLH1YGR271W COX23P38824 151 aa2.05□□□□□ -2.08
SLH1YGR271W SEC16P48415 2195 aaKnown RBP2.05□□□□□ -2.08
SLH1YGR271W YIL177CP40434 1758 aa2.05□□□□□ -2.08
SLH1YGR271W YJL225CP40889 1758 aa2.05□□□□□ -2.08
SLH1YGR271W BPH1P25356 2167 aa2.05□□□□□ -2.08
SLH1YGR271W MDN1Q12019 4910 aaKnown RBP2.05□□□□□ -2.08
SLH1YGR271W EDC1P53080 175 aaPredicted RBP2.04□□□□□ -2.08
SLH1YGR271W YGL014C-AP0C5N1 53 aa2.04□□□□□ -2.08
SLH1YGR271W YML100W-AQ8TGT0 57 aa2.04□□□□□ -2.08
SLH1YGR271W YHL037CP38733 133 aa2.04□□□□□ -2.08
SLH1YGR271W TDA8Q6B2U8 126 aa2.04□□□□□ -2.08
SLH1YGR271W TAO3P40468 2376 aa2.04□□□□□ -2.08
SLH1YGR271W RRP5Q05022 1729 aaKnown RBP2.03□□□□□ -2.08
SLH1YGR271W RPS30AP0CX33 63 aaKnown RBP2.03□□□□□ -2.08
SLH1YGR271W RPS30BP0CX34 63 aaKnown RBP2.03□□□□□ -2.08
SLH1YGR271W YOR316C-AQ3E806 69 aa2.03□□□□□ -2.08
SLH1YGR271W ACC1Q00955 2233 aaKnown RBP2.03□□□□□ -2.08
SLH1YGR271W YGL235WP53071 178 aa2.03□□□□□ -2.08
SLH1YGR271W GSC2P40989 1895 aa2.03□□□□□ -2.08
SLH1YGR271W YGR121W-AQ3E816 71 aa2.03□□□□□ -2.08
SLH1YGR271W YGR146C-AQ8TGT9 53 aa2.03□□□□□ -2.08
SLH1YGR271W YBR027CP38220 110 aa2.02□□□□□ -2.09
SLH1YGR271W YBL081WP38180 368 aaKnown RBP2.02□□□□□ -2.09
SLH1YGR271W YGR018CP53211 109 aa2.02□□□□□ -2.09
SLH1YGR271W YLR162WQ06235 118 aa2.02□□□□□ -2.09
SLH1YGR271W YOR034C-AQ3E735 80 aa2.02□□□□□ -2.09
SLH1YGR271W YRF1-3P0CX14 1859 aa2.01□□□□□ -2.09
SLH1YGR271W YRF1-7P0CX15 1859 aa2.01□□□□□ -2.09
SLH1YGR271W YRF1-6P53819 1859 aa2.01□□□□□ -2.09
SLH1YGR271W YER145C-AA0A023PYF4 145 aa2.01□□□□□ -2.09
SLH1YGR271W YER188C-AP0C0V2 99 aa2.01□□□□□ -2.09
SLH1YGR271W YJL197C-AP0C5P0 93 aa2.01□□□□□ -2.09
SLH1YGR271W RPC10P40422 70 aa2.01□□□□□ -2.09
SLH1YGR271W YGL193CP53097 103 aa2.01□□□□□ -2.09
SLH1YGR271W YDR274CP87283 123 aa2.01□□□□□ -2.09
SLH1YGR271W YHR050W-AQ05451 56 aa2□□□□□ -2.09
SLH1YGR271W BEM2P39960 2167 aaKnown RBP2□□□□□ -2.09
SLH1YGR271W FIG2P25653 1609 aa2□□□□□ -2.09
SLH1YGR271W VPS13Q07878 3144 aa1.99□□□□□ -2.09
SLH1YGR271W YJR128WP47162 119 aa1.99□□□□□ -2.09
SLH1YGR271W POL2P21951 2222 aaKnown RBP1.99□□□□□ -2.09
SLH1YGR271W SED1Q01589 338 aa1.99□□□□□ -2.09
SLH1YGR271W YDR115WQ04598 105 aa1.99□□□□□ -2.09
SLH1YGR271W YOR394C-AQ8TGJ0 55 aa1.99□□□□□ -2.09
SLH1YGR271W RPL29P05747 59 aaPredicted RBP1.98□□□□□ -2.09
SLH1YGR271W URB1P34241 1764 aaKnown RBP1.98□□□□□ -2.09
SLH1YGR271W GLT1Q12680 2145 aaKnown RBP1.98□□□□□ -2.09
SLH1YGR271W NOP10Q6Q547 58 aaPredicted RBP1.97□□□□□ -2.09
SLH1YGR271W YLR255CO13574 117 aa1.96□□□□□ -2.09
SLH1YGR271W YPL278CQ08990 100 aa1.96□□□□□ -2.09
SLH1YGR271W RPL43AP0CX25 92 aaKnown RBP1.96□□□□□ -2.1
SLH1YGR271W RPL43BP0CX26 92 aa1.96□□□□□ -2.1
SLH1YGR271W PRP8P33334 2413 aaKnown RBP1.96□□□□□ -2.1
SLH1YGR271W RPL39P04650 51 aa1.96□□□□□ -2.1
SLH1YGR271W YGL260WP53056 76 aa1.96□□□□□ -2.1
SLH1YGR271W FKS3Q04952 1785 aa1.95□□□□□ -2.1
SLH1YGR271W WWM1P43582 211 aaKnown RBP1.95□□□□□ -2.1
SLH1YGR271W YBR200W-AQ3E755 54 aa1.95□□□□□ -2.1
SLH1YGR271W RIM15P43565 1770 aa1.94□□□□□ -2.1
SLH1YGR271W YOL164W-AQ3E7A5 60 aa1.94□□□□□ -2.1
SLH1YGR271W YOL013W-AP0C272 63 aaPredicted RBP1.94□□□□□ -2.1
SLH1YGR271W LAA1P39526 2014 aa1.94□□□□□ -2.1
SLH1YGR271W YNR077CP53758 84 aa1.93□□□□□ -2.1
SLH1YGR271W YDL022C-AP0C5L6 82 aa1.93□□□□□ -2.1
SLH1YGR271W UTP20P35194 2493 aaKnown RBP1.92□□□□□ -2.1
SLH1YGR271W YER084WP40057 128 aa1.92□□□□□ -2.1
SLH1YGR271W YLR157W-EP0CF00 54 aa1.92□□□□□ -2.1
SLH1YGR271W URA2P07259 2214 aaKnown RBP1.91□□□□□ -2.1
SLH1YGR271W NUP192P47054 1683 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms