RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C LIP1Q03579 150 aa2.54□□□□□ -2
SPT4YGR063C VAM10Q08474 114 aa2.54□□□□□ -2
SPT4YGR063C SEC16P48415 2195 aaKnown RBP2.54□□□□□ -2
SPT4YGR063C GLT1Q12680 2145 aaKnown RBP2.54□□□□□ -2
SPT4YGR063C YPR010C-AA5Z2X5 72 aa2.53□□□□□ -2
SPT4YGR063C YMR122W-AQ3E842 84 aa2.53□□□□□ -2
SPT4YGR063C YOL085CQ99345 113 aa2.53□□□□□ -2
SPT4YGR063C ACC1Q00955 2233 aaKnown RBP2.52□□□□□ -2.01
SPT4YGR063C RPS11AP0CX47 156 aaKnown RBP2.52□□□□□ -2.01
SPT4YGR063C RPS11BP0CX48 156 aaKnown RBP2.52□□□□□ -2.01
SPT4YGR063C EDC2P40023 145 aaPredicted RBP2.52□□□□□ -2.01
SPT4YGR063C YGL149WP53116 101 aa2.52□□□□□ -2.01
SPT4YGR063C YOL014WQ08110 124 aa2.52□□□□□ -2.01
SPT4YGR063C YCR095W-AQ3E787 52 aa2.52□□□□□ -2.01
SPT4YGR063C YNL146C-AQ3E7Z1 64 aa2.52□□□□□ -2.01
SPT4YGR063C RPL39P04650 51 aa2.51□□□□□ -2.01
SPT4YGR063C YCR001WP25347 104 aa2.51□□□□□ -2.01
SPT4YGR063C QCR10P37299 77 aa2.51□□□□□ -2.01
SPT4YGR063C YBR219CP38317 127 aa2.51□□□□□ -2.01
SPT4YGR063C YIL102CP40488 101 aa2.5□□□□□ -2.01
SPT4YGR063C SPC1P46965 94 aa2.5□□□□□ -2.01
SPT4YGR063C YGR025WP53216 100 aa2.5□□□□□ -2.01
SPT4YGR063C MRX7P53869 86 aa2.5□□□□□ -2.01
SPT4YGR063C PMP3P87284 55 aa2.5□□□□□ -2.01
SPT4YGR063C YDL241WQ07738 123 aa2.5□□□□□ -2.01
SPT4YGR063C YNL042W-BQ3E7Z2 85 aa2.5□□□□□ -2.01
SPT4YGR063C YOL013W-AP0C272 63 aaPredicted RBP2.49□□□□□ -2.01
SPT4YGR063C MRPS8Q03799 155 aa2.49□□□□□ -2.01
SPT4YGR063C ATP17Q06405 101 aa2.49□□□□□ -2.01
SPT4YGR063C SDH6Q3E785 79 aa2.49□□□□□ -2.01
SPT4YGR063C YHR213W-BQ8TGK1 99 aa2.49□□□□□ -2.01
SPT4YGR063C YLR157W-DP0CE99 70 aa2.48□□□□□ -2.01
SPT4YGR063C YPR013CQ12145 317 aa2.48□□□□□ -2.01
SPT4YGR063C YIL156W-BQ2V2P4 73 aa2.48□□□□□ -2.01
SPT4YGR063C YNL162W-AQ3E7A8 72 aa2.48□□□□□ -2.01
SPT4YGR063C YLR307C-AQ3E825 87 aa2.48□□□□□ -2.01
SPT4YGR063C YMR001C-AQ8TGS9 76 aa2.48□□□□□ -2.01
SPT4YGR063C BRR2P32639 2163 aaKnown RBP2.48□□□□□ -2.01
SPT4YGR063C YER145C-AA0A023PYF4 145 aa2.47□□□□□ -2.01
SPT4YGR063C YJL197C-AP0C5P0 93 aa2.47□□□□□ -2.01
SPT4YGR063C YHR125WP38831 101 aa2.47□□□□□ -2.01
SPT4YGR063C BSC4P53841 131 aa2.47□□□□□ -2.01
SPT4YGR063C SOM1Q05676 74 aa2.47□□□□□ -2.01
SPT4YGR063C YDR010CQ12426 110 aa2.47□□□□□ -2.01
SPT4YGR063C SEN1Q00416 2231 aaKnown RBP2.47□□□□□ -2.01
SPT4YGR063C AQY2P0CD90 149 aa2.46□□□□□ -2.02
SPT4YGR063C YBR027CP38220 110 aa2.46□□□□□ -2.02
SPT4YGR063C MVB12P42939 101 aa2.46□□□□□ -2.02
SPT4YGR063C ECM19Q06011 112 aa2.46□□□□□ -2.02
SPT4YGR063C YJL133C-AQ3E7A3 74 aa2.46□□□□□ -2.02
SPT4YGR063C YFR032C-BQ8TGU2 87 aa2.46□□□□□ -2.02
SPT4YGR063C YAR023CD6VPM8 179 aa2.45□□□□□ -2.02
SPT4YGR063C WWM1P43582 211 aaKnown RBP2.45□□□□□ -2.02
SPT4YGR063C HOR7Q05827 59 aa2.45□□□□□ -2.02
SPT4YGR063C YBR230W-AQ3E762 66 aa2.45□□□□□ -2.02
SPT4YGR063C SNA2P56508 79 aa2.44□□□□□ -2.02
SPT4YGR063C YOR011W-AQ3E807 68 aa2.44□□□□□ -2.02
SPT4YGR063C YJL127C-BQ3E828 52 aa2.44□□□□□ -2.02
SPT4YGR063C YBR182C-AQ8TGU6 64 aa2.44□□□□□ -2.02
SPT4YGR063C YBL039W-BP0C268 59 aa2.43□□□□□ -2.02
SPT4YGR063C YCL048W-AQ2V2Q2 79 aa2.43□□□□□ -2.02
SPT4YGR063C YNL122CP53921 115 aaPredicted RBP2.42□□□□□ -2.02
SPT4YGR063C DDR2P89113 61 aa2.42□□□□□ -2.02
SPT4YGR063C RDS3Q06835 107 aaPredicted RBP2.42□□□□□ -2.02
SPT4YGR063C AUA1P32450 94 aa2.41□□□□□ -2.02
SPT4YGR063C RPC10P40422 70 aa2.41□□□□□ -2.02
SPT4YGR063C FYV12Q08559 129 aa2.41□□□□□ -2.02
SPT4YGR063C YBL008W-AQ3E821 79 aa2.41□□□□□ -2.02
SPT4YGR063C FAB1P34756 2278 aa2.41□□□□□ -2.02
SPT4YGR063C RTC6O14464 93 aa2.4□□□□□ -2.03
SPT4YGR063C YAR064WP39563 99 aa2.4□□□□□ -2.03
SPT4YGR063C BPH1P25356 2167 aa2.4□□□□□ -2.03
SPT4YGR063C LCL2Q08045 131 aa2.39□□□□□ -2.03
SPT4YGR063C YGR240C-AQ3E786 66 aa2.39□□□□□ -2.03
SPT4YGR063C YGL014C-AP0C5N1 53 aa2.38□□□□□ -2.03
SPT4YGR063C IGD1P43598 195 aa2.38□□□□□ -2.03
SPT4YGR063C IRA2P19158 3079 aa2.35□□□□□ -2.03
SPT4YGR063C SGF11Q03067 99 aa2.35□□□□□ -2.03
SPT4YGR063C YOL097W-AQ3E7Y9 61 aa2.35□□□□□ -2.03
SPT4YGR063C TAR1Q8TGM6 124 aa2.35□□□□□ -2.03
SPT4YGR063C Q0032Q9ZZX7 96 aa2.35□□□□□ -2.03
SPT4YGR063C YOR072WQ08486 104 aa2.34□□□□□ -2.03
SPT4YGR063C YDL012CQ12489 107 aa2.34□□□□□ -2.03
SPT4YGR063C TOM1Q03280 3268 aa2.34□□□□□ -2.03
SPT4YGR063C YPL278CQ08990 100 aa2.32□□□□□ -2.04
SPT4YGR063C RPL33AP05744 107 aaKnown RBP2.31□□□□□ -2.04
SPT4YGR063C RPL33BP41056 107 aaKnown RBP2.31□□□□□ -2.04
SPT4YGR063C YHR007C-AQ07074 71 aa2.31□□□□□ -2.04
SPT4YGR063C YLR255CO13574 117 aa2.3□□□□□ -2.04
SPT4YGR063C YDR210WQ03482 75 aa2.3□□□□□ -2.04
SPT4YGR063C YBR201C-AQ2V2Q3 67 aa2.3□□□□□ -2.04
SPT4YGR063C COX8P04039 78 aa2.29□□□□□ -2.04
SPT4YGR063C YDR115WQ04598 105 aa2.29□□□□□ -2.04
SPT4YGR063C YER175W-AQ8TGU4 54 aa2.29□□□□□ -2.04
SPT4YGR063C VPS13Q07878 3144 aa2.29□□□□□ -2.04
SPT4YGR063C GIS2P53849 153 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04 RIP-Chip
SPT4YGR063C YGL041C-BQ3E750 60 aa2.28□□□□□ -2.04
SPT4YGR063C YGR146C-AQ8TGT9 53 aa2.28□□□□□ -2.04
SPT4YGR063C YCR041WP37265 110 aa2.26□□□□□ -2.05
SPT4YGR063C CSF1Q12150 2958 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms