RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W RPS11AP0CX47 156 aaKnown RBP2.45□□□□□ -2.02
PTR3YFR029W RPS11BP0CX48 156 aaKnown RBP2.45□□□□□ -2.02
PTR3YFR029W YGL041C-BQ3E750 60 aa2.45□□□□□ -2.02
PTR3YFR029W YNL146C-AQ3E7Z1 64 aa2.45□□□□□ -2.02
PTR3YFR029W YGR035W-AQ45U48 73 aa2.44□□□□□ -2.02
PTR3YFR029W QCR9P22289 66 aa2.44□□□□□ -2.02
PTR3YFR029W FPR2P32472 135 aa2.44□□□□□ -2.02
PTR3YFR029W ERI1P62651 68 aaKnown RBP2.44□□□□□ -2.02
PTR3YFR029W YIL102C-AQ2V2P5 75 aa2.44□□□□□ -2.02
PTR3YFR029W RIM15P43565 1770 aa2.43□□□□□ -2.02
PTR3YFR029W GIS2P53849 153 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
PTR3YFR029W YKL065W-AQ2V2P2 73 aa2.43□□□□□ -2.02
PTR3YFR029W YGR240C-AQ3E786 66 aa2.43□□□□□ -2.02
PTR3YFR029W BRR2P32639 2163 aaKnown RBP2.43□□□□□ -2.02
PTR3YFR029W TOM1Q03280 3268 aa2.42□□□□□ -2.02
PTR3YFR029W YDL022C-AP0C5L6 82 aa2.42□□□□□ -2.02
PTR3YFR029W SMX2P40204 77 aaKnown RBP2.42□□□□□ -2.02
PTR3YFR029W YDR246W-AQ3E763 66 aa2.42□□□□□ -2.02
PTR3YFR029W FAB1P34756 2278 aa2.42□□□□□ -2.02
PTR3YFR029W YPR096CO13587 100 aa2.4□□□□□ -2.03
PTR3YFR029W LCL1Q02786 101 aa2.4□□□□□ -2.03
PTR3YFR029W AIM19P40502 157 aa2.39□□□□□ -2.03
PTR3YFR029W YOR032W-AQ8TGS1 66 aa2.39□□□□□ -2.03
PTR3YFR029W AQY2P0CD90 149 aa2.38□□□□□ -2.03
PTR3YFR029W YKL018C-AQ3E7A7 99 aa2.38□□□□□ -2.03
PTR3YFR029W SPI1P40092 148 aa2.36□□□□□ -2.03
PTR3YFR029W MGR2Q02889 113 aa2.36□□□□□ -2.03
PTR3YFR029W MOT1P32333 1867 aa2.35□□□□□ -2.03
PTR3YFR029W YSY6P38374 65 aa2.35□□□□□ -2.03
PTR3YFR029W FLO1P32768 1537 aa2.35□□□□□ -2.03
PTR3YFR029W YHR212W-AP0CX91 67 aa2.34□□□□□ -2.03
PTR3YFR029W YNL122CP53921 115 aaPredicted RBP2.34□□□□□ -2.04
PTR3YFR029W YNL042W-BQ3E7Z2 85 aa2.34□□□□□ -2.04
PTR3YFR029W YMR122W-AQ3E842 84 aa2.34□□□□□ -2.04
PTR3YFR029W YOR034C-AQ3E735 80 aa2.33□□□□□ -2.04
PTR3YFR029W HKR1P41809 1802 aa2.33□□□□□ -2.04
PTR3YFR029W YNL190WP53872 204 aa2.32□□□□□ -2.04
PTR3YFR029W FIG2P25653 1609 aa2.32□□□□□ -2.04
PTR3YFR029W YKL023C-AQ2V2P3 75 aa2.3□□□□□ -2.04
PTR3YFR029W YBR201C-AQ2V2Q3 67 aa2.3□□□□□ -2.04
PTR3YFR029W SEC16P48415 2195 aaKnown RBP2.3□□□□□ -2.04
PTR3YFR029W EDC1P53080 175 aaPredicted RBP2.3□□□□□ -2.04
PTR3YFR029W SHU1P38751 150 aa2.29□□□□□ -2.04
PTR3YFR029W PAU7P39545 55 aa2.29□□□□□ -2.04
PTR3YFR029W YIL086CP40503 102 aa2.29□□□□□ -2.04
PTR3YFR029W YJL009WP47078 108 aa2.29□□□□□ -2.04
PTR3YFR029W YOL013W-AP0C272 63 aaPredicted RBP2.29□□□□□ -2.04
PTR3YFR029W POL2P21951 2222 aaKnown RBP2.28□□□□□ -2.04
PTR3YFR029W HFA1P32874 2273 aa2.28□□□□□ -2.04
PTR3YFR029W MVB12P42939 101 aa2.28□□□□□ -2.04
PTR3YFR029W HUG1Q6Q5K6 68 aa2.27□□□□□ -2.05
PTR3YFR029W Q0032Q9ZZX7 96 aa2.27□□□□□ -2.05
PTR3YFR029W VPS13Q07878 3144 aa2.27□□□□□ -2.05
PTR3YFR029W BLM10P43583 2143 aa2.26□□□□□ -2.05
PTR3YFR029W YCR001WP25347 104 aa2.25□□□□□ -2.05
PTR3YFR029W SGF11Q03067 99 aa2.25□□□□□ -2.05
PTR3YFR029W BEM2P39960 2167 aaKnown RBP2.25□□□□□ -2.05
PTR3YFR029W YBR032WP38223 100 aa2.25□□□□□ -2.05
PTR3YFR029W YMR007WQ03675 126 aa2.25□□□□□ -2.05
PTR3YFR029W RPS30AP0CX33 63 aaKnown RBP2.24□□□□□ -2.05
PTR3YFR029W RPS30BP0CX34 63 aaKnown RBP2.24□□□□□ -2.05
PTR3YFR029W YOR192C-CQ3E736 78 aa2.24□□□□□ -2.05
PTR3YFR029W ATP18P81450 59 aa2.21□□□□□ -2.06
PTR3YFR029W ATP17Q06405 101 aa2.21□□□□□ -2.06
PTR3YFR029W YAR064WP39563 99 aa2.2□□□□□ -2.06
PTR3YFR029W YJR128WP47162 119 aa2.2□□□□□ -2.06
PTR3YFR029W YOL166W-AQ8TGJ1 51 aa2.18□□□□□ -2.06
PTR3YFR029W TAO3P40468 2376 aa2.17□□□□□ -2.06
PTR3YFR029W YDR182W-AQ3E796 67 aa2.17□□□□□ -2.06
PTR3YFR029W YOR072WQ08486 104 aa2.17□□□□□ -2.06
PTR3YFR029W SDH6Q3E785 79 aa2.15□□□□□ -2.07
PTR3YFR029W URA2P07259 2214 aaKnown RBP2.14□□□□□ -2.07
PTR3YFR029W HHY1P39982 102 aa2.13□□□□□ -2.07
PTR3YFR029W COX7P10174 60 aa2.12□□□□□ -2.07
PTR3YFR029W YDR524C-BQ3E6R4 66 aa2.12□□□□□ -2.07
PTR3YFR029W AUA1P32450 94 aa2.12□□□□□ -2.07
PTR3YFR029W RPC10P40422 70 aa2.12□□□□□ -2.07
PTR3YFR029W YLR146W-AQ2V2P1 62 aa2.1□□□□□ -2.07
PTR3YFR029W HUB1Q6Q546 73 aa2.1□□□□□ -2.07
PTR3YFR029W YPR108W-AQ3E7B3 70 aa2.09□□□□□ -2.07
PTR3YFR029W YOL097W-AQ3E7Y9 61 aa2.09□□□□□ -2.07
PTR3YFR029W YPR117WQ06116 2489 aa2.09□□□□□ -2.08
PTR3YFR029W HUA1P40325 198 aa2.07□□□□□ -2.08
PTR3YFR029W FMP27Q06179 2628 aa2.06□□□□□ -2.08
PTR3YFR029W IRA1P18963 3092 aa2.06□□□□□ -2.08
PTR3YFR029W YIL102CP40488 101 aa2.05□□□□□ -2.08
PTR3YFR029W YBL039W-BP0C268 59 aa2.04□□□□□ -2.08
PTR3YFR029W YMR141CP40211 102 aa2.03□□□□□ -2.08
PTR3YFR029W IRA2P19158 3079 aa2.03□□□□□ -2.09
PTR3YFR029W YJR107C-AP0CT86 78 aa2.02□□□□□ -2.09
PTR3YFR029W YBR200W-AQ3E755 54 aa2.02□□□□□ -2.09
PTR3YFR029W YMR001C-AQ8TGS9 76 aa2.02□□□□□ -2.09
PTR3YFR029W RPL38P49167 78 aaKnown RBP2.01□□□□□ -2.09
PTR3YFR029W YDR034W-BQ6Q5X2 51 aa2.01□□□□□ -2.09
PTR3YFR029W CSF1Q12150 2958 aa2.01□□□□□ -2.09
PTR3YFR029W YLR157W-DP0CE99 70 aa2.01□□□□□ -2.09
PTR3YFR029W TOR2P32600 2474 aaKnown RBP2□□□□□ -2.09
PTR3YFR029W YBR072C-AQ3E794 53 aa2□□□□□ -2.09
PTR3YFR029W YHR213W-BQ8TGK1 99 aa2□□□□□ -2.09
PTR3YFR029W RPS27AP35997 82 aaKnown RBP1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms