RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W YIL102CP40488 101 aa0.69□□□□□ -2.3
SMC1YFL008W YFL019CP43576 117 aa0.69□□□□□ -2.3
SMC1YFL008W RPL38P49167 78 aaKnown RBP0.69□□□□□ -2.3
SMC1YFL008W HOR7Q05827 59 aa0.69□□□□□ -2.3
SMC1YFL008W ATP17Q06405 101 aa0.69□□□□□ -2.3
SMC1YFL008W YMR175W-AQ3E766 64 aa0.69□□□□□ -2.3
SMC1YFL008W YAR023CD6VPM8 179 aa0.69□□□□□ -2.3
SMC1YFL008W ATP15P21306 62 aa0.69□□□□□ -2.3
SMC1YFL008W YEL067CP39978 195 aa0.69□□□□□ -2.3
SMC1YFL008W EDC2P40023 145 aaPredicted RBP0.69□□□□□ -2.3
SMC1YFL008W GAT4P40569 121 aa0.69□□□□□ -2.3
SMC1YFL008W SIP18P50263 79 aa0.69□□□□□ -2.3
SMC1YFL008W YPR013CQ12145 317 aa0.69□□□□□ -2.3
SMC1YFL008W YDR524C-BQ3E6R4 66 aa0.69□□□□□ -2.3
SMC1YFL008W YBL008W-AQ3E821 79 aa0.69□□□□□ -2.3
SMC1YFL008W RPL29P05747 59 aaPredicted RBP0.69□□□□□ -2.3
SMC1YFL008W YER188C-AP0C0V2 99 aa0.69□□□□□ -2.3
SMC1YFL008W YBL039W-BP0C268 59 aa0.69□□□□□ -2.3
SMC1YFL008W MRPL38P35996 138 aaPredicted RBP0.69□□□□□ -2.3
SMC1YFL008W YBR219CP38317 127 aa0.69□□□□□ -2.3
SMC1YFL008W YAL064WP39711 94 aa0.69□□□□□ -2.3
SMC1YFL008W YFR035CP43608 114 aa0.69□□□□□ -2.3
SMC1YFL008W YGR025WP53216 100 aa0.69□□□□□ -2.3
SMC1YFL008W TOM7P53507 60 aa0.69□□□□□ -2.3
SMC1YFL008W YDR274CP87283 123 aa0.69□□□□□ -2.3
SMC1YFL008W YMR122CQ03879 124 aa0.69□□□□□ -2.3
SMC1YFL008W YLR162WQ06235 118 aa0.69□□□□□ -2.3
SMC1YFL008W YLR157W-DP0CE99 70 aa0.68□□□□□ -2.3
SMC1YFL008W RPS11AP0CX47 156 aaKnown RBP0.68□□□□□ -2.3
SMC1YFL008W RPS11BP0CX48 156 aaKnown RBP0.68□□□□□ -2.3
SMC1YFL008W COX23P38824 151 aa0.68□□□□□ -2.3
SMC1YFL008W YNR077CP53758 84 aa0.68□□□□□ -2.3
SMC1YFL008W OLI1P61829 76 aa0.68□□□□□ -2.3
SMC1YFL008W YGL041C-BQ3E750 60 aa0.68□□□□□ -2.3
SMC1YFL008W YIL046W-AQ3E7Z4 54 aa0.68□□□□□ -2.3
SMC1YFL008W YEL008WP40001 126 aa0.68□□□□□ -2.3
SMC1YFL008W YPR153WQ06537 140 aa0.68□□□□□ -2.3
SMC1YFL008W YBR230W-AQ3E762 66 aa0.68□□□□□ -2.3
SMC1YFL008W YLL006W-AQ3E814 58 aa0.68□□□□□ -2.3
SMC1YFL008W TDA8Q6B2U8 126 aa0.68□□□□□ -2.3
SMC1YFL008W YHR213WP0CI67 198 aa0.68□□□□□ -2.3
SMC1YFL008W RPS30AP0CX33 63 aaKnown RBP0.68□□□□□ -2.3
SMC1YFL008W RPS30BP0CX34 63 aaKnown RBP0.68□□□□□ -2.3
SMC1YFL008W YNL190WP53872 204 aa0.68□□□□□ -2.3
SMC1YFL008W YNL122CP53921 115 aaPredicted RBP0.68□□□□□ -2.3
SMC1YFL008W DDR2P89113 61 aa0.68□□□□□ -2.3
SMC1YFL008W SGF11Q03067 99 aa0.68□□□□□ -2.3
SMC1YFL008W SOM1Q05676 74 aa0.68□□□□□ -2.3
SMC1YFL008W YGR240C-AQ3E786 66 aa0.68□□□□□ -2.3
SMC1YFL008W YNL146C-AQ3E7Z1 64 aa0.68□□□□□ -2.3
SMC1YFL008W MRX7P53869 86 aa0.67□□□□□ -2.3
SMC1YFL008W YOR192C-CQ3E736 78 aa0.67□□□□□ -2.3
SMC1YFL008W YBR200W-AQ3E755 54 aa0.67□□□□□ -2.3
SMC1YFL008W YMR122W-AQ3E842 84 aa0.67□□□□□ -2.3
SMC1YFL008W YMR001C-AQ8TGS9 76 aa0.67□□□□□ -2.3
SMC1YFL008W AQY2P0CD90 149 aa0.67□□□□□ -2.3
SMC1YFL008W MVB12P42939 101 aa0.67□□□□□ -2.3
SMC1YFL008W VAM10Q08474 114 aa0.67□□□□□ -2.3
SMC1YFL008W NOP10Q6Q547 58 aaPredicted RBP0.67□□□□□ -2.3
SMC1YFL008W SED1Q01589 338 aa0.67□□□□□ -2.3
SMC1YFL008W YOL160WQ08321 113 aa0.67□□□□□ -2.3
SMC1YFL008W YDR010CQ12426 110 aa0.67□□□□□ -2.3
SMC1YFL008W YJL127C-BQ3E828 52 aa0.67□□□□□ -2.3
SMC1YFL008W MRPS12P53732 153 aa0.66□□□□□ -2.3
SMC1YFL008W YBR201C-AQ2V2Q3 67 aa0.66□□□□□ -2.3
SMC1YFL008W YJL133C-AQ3E7A3 74 aa0.66□□□□□ -2.3
SMC1YFL008W YNL042W-BQ3E7Z2 85 aa0.66□□□□□ -2.3
SMC1YFL008W Q0032Q9ZZX7 96 aa0.66□□□□□ -2.3
SMC1YFL008W YOL013W-AP0C272 63 aaPredicted RBP0.66□□□□□ -2.3
SMC1YFL008W RPS27AP35997 82 aaKnown RBP0.66□□□□□ -2.3
SMC1YFL008W YBR027CP38220 110 aa0.66□□□□□ -2.3
SMC1YFL008W RPS27BP38711 82 aa0.66□□□□□ -2.3
SMC1YFL008W YOL014WQ08110 124 aa0.66□□□□□ -2.3
SMC1YFL008W YPL278CQ08990 100 aa0.66□□□□□ -2.3
SMC1YFL008W YOR011W-AQ3E807 68 aa0.66□□□□□ -2.3
SMC1YFL008W YGR121W-AQ3E816 71 aa0.66□□□□□ -2.3
SMC1YFL008W YGR035W-AQ45U48 73 aa0.66□□□□□ -2.3
SMC1YFL008W YHR213W-BQ8TGK1 99 aa0.66□□□□□ -2.3
SMC1YFL008W RPC10P40422 70 aa0.66□□□□□ -2.3
SMC1YFL008W YIL086CP40503 102 aa0.66□□□□□ -2.3
SMC1YFL008W YFR032C-BQ8TGU2 87 aa0.66□□□□□ -2.3
SMC1YFL008W YFR009W-AP0C5M9 85 aa0.65□□□□□ -2.31
SMC1YFL008W YJL197C-AP0C5P0 93 aa0.65□□□□□ -2.31
SMC1YFL008W YHR125WP38831 101 aa0.65□□□□□ -2.31
SMC1YFL008W EDC1P53080 175 aaPredicted RBP0.65□□□□□ -2.31
SMC1YFL008W FYV12Q08559 129 aa0.65□□□□□ -2.31
SMC1YFL008W YDR246W-AQ3E763 66 aa0.65□□□□□ -2.31
SMC1YFL008W YOR376W-AQ3E805 51 aa0.65□□□□□ -2.31
SMC1YFL008W YGL014C-AP0C5N1 53 aa0.65□□□□□ -2.31
SMC1YFL008W CUP1-1P0CX80 61 aa0.65□□□□□ -2.31
SMC1YFL008W CUP1-2P0CX81 61 aa0.65□□□□□ -2.31
SMC1YFL008W YAR064WP39563 99 aa0.65□□□□□ -2.31
SMC1YFL008W HUA1P40325 198 aa0.65□□□□□ -2.31
SMC1YFL008W YOR072WQ08486 104 aa0.65□□□□□ -2.31
SMC1YFL008W RRT15Q3E811 62 aa0.65□□□□□ -2.31
SMC1YFL008W YOL166W-AQ8TGJ1 51 aa0.65□□□□□ -2.31
SMC1YFL008W CDC39P25655 2108 aaKnown RBP0.65□□□□□ -2.31
SMC1YFL008W COX8P04039 78 aa0.65□□□□□ -2.31
SMC1YFL008W YHR007C-AQ07074 71 aa0.65□□□□□ -2.31
SMC1YFL008W COX7P10174 60 aa0.64□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms