RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W BET1P22804 142 aa1.21□□□□□ -2.22
VPS41YDR080W YKL044WP36092 106 aa1.21□□□□□ -2.22
VPS41YDR080W POP3P53833 195 aaPredicted RBP1.21□□□□□ -2.22
VPS41YDR080W LSO2Q3E772 92 aaKnown RBP1.21□□□□□ -2.22
VPS41YDR080W PAU23Q07987 124 aa1.21□□□□□ -2.22
VPS41YDR080W FYV7Q12247 151 aa1.21□□□□□ -2.22
VPS41YDR080W FYV4P38783 130 aaPredicted RBP1.2□□□□□ -2.22
VPS41YDR080W OST2P46964 130 aa1.2□□□□□ -2.22
VPS41YDR080W YML108WQ03759 105 aa1.2□□□□□ -2.22
VPS41YDR080W YHR139C-AO13536 103 aa1.2□□□□□ -2.22
VPS41YDR080W YDL022C-AP0C5L6 82 aa1.2□□□□□ -2.22
VPS41YDR080W ATG8P38182 117 aaRIP-Chip data1.2□□□□□ -2.22not detected
VPS41YDR080W YAR1P46683 200 aa1.2□□□□□ -2.22
VPS41YDR080W CYT2Q00873 224 aa1.2□□□□□ -2.22
VPS41YDR080W YHR073W-AP0C5N7 58 aa1.2□□□□□ -2.22
VPS41YDR080W YGL230CP53074 147 aa1.2□□□□□ -2.22
VPS41YDR080W HHO1P53551 258 aa1.2□□□□□ -2.22
VPS41YDR080W RSM18P40033 138 aa1.18□□□□□ -2.22
VPS41YDR080W YGR164WP53291 111 aa1.18□□□□□ -2.22
VPS41YDR080W YPL080CQ02826 108 aa1.18□□□□□ -2.22
VPS41YDR080W ZEO1Q08245 113 aa1.18□□□□□ -2.22
VPS41YDR080W YDL157CQ12082 118 aa1.18□□□□□ -2.22
VPS41YDR080W YHR130CP38834 111 aa1.17□□□□□ -2.22
VPS41YDR080W RSM19P53733 91 aaPredicted RBP1.17□□□□□ -2.22
VPS41YDR080W POP7P38291 140 aa1.17□□□□□ -2.22
VPS41YDR080W YER134CP40081 178 aa1.17□□□□□ -2.22
VPS41YDR080W CNL1Q06333 122 aa1.17□□□□□ -2.22
VPS41YDR080W SEC11P15367 167 aa1.17□□□□□ -2.22
VPS41YDR080W CWC27Q02770 301 aa1.17□□□□□ -2.22
VPS41YDR080W CGR1P53188 120 aa1.16□□□□□ -2.22
VPS41YDR080W YNR077CP53758 84 aa1.16□□□□□ -2.22
VPS41YDR080W DSE2P38844 325 aa1.16□□□□□ -2.22
VPS41YDR080W YLR162WQ06235 118 aa1.16□□□□□ -2.22
VPS41YDR080W NSE4P43124 402 aa1.15□□□□□ -2.22
VPS41YDR080W COF1Q03048 143 aaKnown RBP1.15□□□□□ -2.22
VPS41YDR080W YBR016WP38216 128 aa1.14□□□□□ -2.23
VPS41YDR080W GTT1P40582 234 aa1.14□□□□□ -2.23
VPS41YDR080W RUB1Q03919 77 aa1.14□□□□□ -2.23
VPS41YDR080W TSC3Q3E790 80 aa1.14□□□□□ -2.23
VPS41YDR080W MPC3P53311 146 aa1.14□□□□□ -2.23
VPS41YDR080W COA6Q3E846 104 aa1.14□□□□□ -2.23
VPS41YDR080W MIC10Q96VH5 97 aa1.14□□□□□ -2.23
VPS41YDR080W MRPL44P19956 98 aa1.13□□□□□ -2.23
VPS41YDR080W YER187WP40102 141 aa1.13□□□□□ -2.23
VPS41YDR080W LSM8P47093 109 aaKnown RBP1.13□□□□□ -2.23
VPS41YDR080W YML054C-AQ3E809 52 aa1.13□□□□□ -2.23
VPS41YDR080W YLR255CO13574 117 aa1.12□□□□□ -2.23
VPS41YDR080W YPR153WQ06537 140 aa1.11□□□□□ -2.23
VPS41YDR080W YJL133C-AQ3E7A3 74 aa1.11□□□□□ -2.23
VPS41YDR080W YOR304C-AO14468 76 aa1.1□□□□□ -2.23
VPS41YDR080W YHR213W-BQ8TGK1 99 aa1.1□□□□□ -2.23
VPS41YDR080W COX23P38824 151 aa1.1□□□□□ -2.23
VPS41YDR080W HUR1P45820 110 aa1.1□□□□□ -2.23
VPS41YDR080W ATP18P81450 59 aa1.1□□□□□ -2.23
VPS41YDR080W RPL37AP49166 88 aaKnown RBP1.09□□□□□ -2.23
VPS41YDR080W EDC1P53080 175 aaPredicted RBP1.09□□□□□ -2.23
VPS41YDR080W ISD11Q6Q560 94 aa1.09□□□□□ -2.23
VPS41YDR080W SAE3P89114 91 aa1.09□□□□□ -2.24
VPS41YDR080W YOR034C-AQ3E735 80 aa1.09□□□□□ -2.24
VPS41YDR080W MSL1P40567 111 aaPredicted RBP1.08□□□□□ -2.24
VPS41YDR080W YOR316C-AQ3E806 69 aa1.08□□□□□ -2.24
VPS41YDR080W YFR009W-AP0C5M9 85 aa1.08□□□□□ -2.24
VPS41YDR080W CUE4Q04201 117 aaPredicted RBP1.08□□□□□ -2.24
VPS41YDR080W YLR361C-AQ3E795 98 aa1.07□□□□□ -2.24
VPS41YDR080W YJR107C-AP0CT86 78 aa1.07□□□□□ -2.24
VPS41YDR080W GLC8P41818 229 aa1.07□□□□□ -2.24
VPS41YDR080W RPL36AP05745 100 aaPredicted RBP1.06□□□□□ -2.24
VPS41YDR080W ICS3P47034 131 aa1.06□□□□□ -2.24
VPS41YDR080W SSS1P35179 80 aa1.06□□□□□ -2.24
VPS41YDR080W ELC1Q03071 99 aa1.06□□□□□ -2.24
VPS41YDR080W SEN15Q04675 128 aa1.05□□□□□ -2.24
VPS41YDR080W LSM6Q06406 86 aaKnown RBP1.05□□□□□ -2.24
VPS41YDR080W SLO1Q3E784 85 aa1.05□□□□□ -2.24
VPS41YDR080W TDA2P40045 126 aa1.05□□□□□ -2.24
VPS41YDR080W LIP1Q03579 150 aa1.05□□□□□ -2.24
VPS41YDR080W YER181CP40097 107 aa1.05□□□□□ -2.24
VPS41YDR080W YBR121C-AP0C5L4 52 aa1.04□□□□□ -2.24
VPS41YDR080W YLR296WQ05898 108 aa1.04□□□□□ -2.24
VPS41YDR080W YIR021W-AQ3E739 70 aa1.04□□□□□ -2.24
VPS41YDR080W YKL183C-AQ3E765 70 aa1.04□□□□□ -2.24
VPS41YDR080W RPS28BP0C0X0 67 aaKnown RBP1.03□□□□□ -2.24
VPS41YDR080W RPS28AQ3E7X9 67 aaPredicted RBP1.03□□□□□ -2.24
VPS41YDR080W YCR050CP25630 102 aa1.03□□□□□ -2.24
VPS41YDR080W AIM4P38305 123 aaPredicted RBP1.03□□□□□ -2.24
VPS41YDR080W YHR086W-AQ3E746 53 aa1.03□□□□□ -2.24
VPS41YDR080W YDL085C-AQ3E7B7 68 aaKnown RBP1.03□□□□□ -2.24
VPS41YDR080W YAR064WP39563 99 aa1.02□□□□□ -2.25
VPS41YDR080W YIL134C-AQ45U18 67 aa1.02□□□□□ -2.25
VPS41YDR080W PAI3P01094 68 aa1.02□□□□□ -2.25
VPS41YDR080W INO4P13902 151 aa1.02□□□□□ -2.25
VPS41YDR080W SKI6P46948 246 aaPredicted RBP1.02□□□□□ -2.25
VPS41YDR080W YBL008W-AQ3E821 79 aa1.02□□□□□ -2.25
VPS41YDR080W NAT5Q08689 176 aa1.02□□□□□ -2.25
VPS41YDR080W YGR039WP53225 103 aa1.01□□□□□ -2.25
VPS41YDR080W RAD6P06104 172 aa1□□□□□ -2.25
VPS41YDR080W YPR170W-BP0C5R9 85 aa1□□□□□ -2.25
VPS41YDR080W YFL065CP43539 102 aa1□□□□□ -2.25
VPS41YDR080W YPR203WQ08994 102 aa1□□□□□ -2.25
VPS41YDR080W YOL014WQ08110 124 aa0.99□□□□□ -2.25
VPS41YDR080W YDR381C-AQ3E6R5 114 aa0.99□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms