RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W HPA2Q06592 156 aa1.08□□□□□ -2.24
UBP1YDL122W MRP17P28778 131 aa1.07□□□□□ -2.24
UBP1YDL122W MIC10Q96VH5 97 aa1.07□□□□□ -2.24
UBP1YDL122W SNN1P48232 102 aa1.07□□□□□ -2.24
UBP1YDL122W YNL122CP53921 115 aaPredicted RBP1.07□□□□□ -2.24
UBP1YDL122W SEN15Q04675 128 aa1.07□□□□□ -2.24
UBP1YDL122W YBR200W-AQ3E755 54 aa1.07□□□□□ -2.24
UBP1YDL122W YPR203WQ08994 102 aa1.06□□□□□ -2.24
UBP1YDL122W COA6Q3E846 104 aa1.06□□□□□ -2.24
UBP1YDL122W YIL163CP40448 117 aa1.06□□□□□ -2.24
UBP1YDL122W YDR210WQ03482 75 aa1.06□□□□□ -2.24
UBP1YDL122W PAU19P0CE85 124 aa1.05□□□□□ -2.24
UBP1YDL122W PAU3P25610 124 aa1.05□□□□□ -2.24
UBP1YDL122W COX23P38824 151 aa1.05□□□□□ -2.24
UBP1YDL122W IRC21Q04772 201 aa1.05□□□□□ -2.24
UBP1YDL122W YMR175W-AQ3E766 64 aa1.05□□□□□ -2.24
UBP1YDL122W ENV10Q99382 181 aa1.05□□□□□ -2.24
UBP1YDL122W AIM4P38305 123 aaPredicted RBP1.05□□□□□ -2.24
UBP1YDL122W MIC27P50945 234 aa1.05□□□□□ -2.24
UBP1YDL122W YLR342W-AQ3E810 57 aa1.05□□□□□ -2.24
UBP1YDL122W YLR363W-AQ3E747 85 aa1.04□□□□□ -2.24
UBP1YDL122W AQY2P0CD90 149 aa1.03□□□□□ -2.24
UBP1YDL122W LSM2P38203 95 aaKnown RBP1.03□□□□□ -2.24
UBP1YDL122W SWM2P40342 146 aa1.03□□□□□ -2.24
UBP1YDL122W CWP2P43497 92 aa1.03□□□□□ -2.24
UBP1YDL122W YMR082CQ04276 118 aa1.03□□□□□ -2.25
UBP1YDL122W POC4Q12245 148 aaPredicted RBP1.03□□□□□ -2.25
UBP1YDL122W COX7P10174 60 aa1.02□□□□□ -2.25
UBP1YDL122W PAU16P35994 123 aa1.02□□□□□ -2.25
UBP1YDL122W CYB5P40312 120 aa1.02□□□□□ -2.25
UBP1YDL122W PAU15P40585 124 aa1.02□□□□□ -2.25
UBP1YDL122W YJL009WP47078 108 aa1.02□□□□□ -2.25
UBP1YDL122W YLR285C-AQ3E771 56 aa1.02□□□□□ -2.25
UBP1YDL122W HMRA2P0CY13 119 aa1.01□□□□□ -2.25
UBP1YDL122W YGR121W-AQ3E816 71 aa1.01□□□□□ -2.25
UBP1YDL122W YAR064WP39563 99 aa1.01□□□□□ -2.25
UBP1YDL122W MSL1P40567 111 aaPredicted RBP1.01□□□□□ -2.25
UBP1YDL122W RSM19P53733 91 aaPredicted RBP1.01□□□□□ -2.25
UBP1YDL122W Q0032Q9ZZX7 96 aa1.01□□□□□ -2.25
UBP1YDL122W SRB6P32570 121 aa1□□□□□ -2.25
UBP1YDL122W YHL005CP38752 130 aa1□□□□□ -2.25
UBP1YDL122W ICS3P47034 131 aa1□□□□□ -2.25
UBP1YDL122W YOR072WQ08486 104 aa1□□□□□ -2.25
UBP1YDL122W YDR042CQ03205 200 aa0.99□□□□□ -2.25
UBP1YDL122W LSM6Q06406 86 aaKnown RBP0.99□□□□□ -2.25
UBP1YDL122W YGL194C-AQ2V2P6 80 aa0.99□□□□□ -2.25
UBP1YDL122W HMRA1P0CY11 126 aa0.98□□□□□ -2.25
UBP1YDL122W RPS22AP0C0W1 130 aaKnown RBP0.98□□□□□ -2.25
UBP1YDL122W YIL102CP40488 101 aa0.98□□□□□ -2.25
UBP1YDL122W RPS22BQ3E7Y3 130 aaKnown RBP0.98□□□□□ -2.25
UBP1YDL122W YOL013W-AP0C272 63 aaPredicted RBP0.97□□□□□ -2.25
UBP1YDL122W PAU5P43575 122 aa0.97□□□□□ -2.25
UBP1YDL122W MGR2Q02889 113 aa0.97□□□□□ -2.25
UBP1YDL122W SUS1Q6WNK7 96 aa0.97□□□□□ -2.25
UBP1YDL122W MRPL31P14063 131 aaPredicted RBP0.97□□□□□ -2.25
UBP1YDL122W YHR173CP38864 112 aa0.96□□□□□ -2.26
UBP1YDL122W GCV3P39726 170 aaPredicted RBP0.96□□□□□ -2.26
UBP1YDL122W YCR095W-AQ3E787 52 aa0.96□□□□□ -2.26
UBP1YDL122W YHR213W-AQ8TGT4 77 aa0.96□□□□□ -2.26
UBP1YDL122W MRPS12P53732 153 aa0.96□□□□□ -2.26
UBP1YDL122W YMR007WQ03675 126 aa0.96□□□□□ -2.26
UBP1YDL122W RSM18P40033 138 aa0.95□□□□□ -2.26
UBP1YDL122W YBL039W-BP0C268 59 aa0.95□□□□□ -2.26
UBP1YDL122W QCR9P22289 66 aa0.95□□□□□ -2.26
UBP1YDL122W MVB12P42939 101 aa0.94□□□□□ -2.26
UBP1YDL122W HUA1P40325 198 aa0.94□□□□□ -2.26
UBP1YDL122W YKL068W-AQ3E826 78 aa0.94□□□□□ -2.26
UBP1YDL122W ICY1Q04329 127 aa0.93□□□□□ -2.26
UBP1YDL122W YPL038W-AQ3E7B4 63 aa0.93□□□□□ -2.26
UBP1YDL122W YMR141CP40211 102 aa0.92□□□□□ -2.26
UBP1YDL122W YKL023C-AQ2V2P3 75 aa0.92□□□□□ -2.26
UBP1YDL122W COA2Q3E823 68 aa0.92□□□□□ -2.26
UBP1YDL122W YAL065CO13511 128 aa0.91□□□□□ -2.26
UBP1YDL122W PAU6P0CE90 120 aa0.91□□□□□ -2.26
UBP1YDL122W PAU18P0CE91 120 aa0.91□□□□□ -2.26
UBP1YDL122W YHR213W-BQ8TGK1 99 aa0.91□□□□□ -2.26
UBP1YDL122W HHY1P39982 102 aa0.91□□□□□ -2.26
UBP1YDL122W YJR128WP47162 119 aa0.91□□□□□ -2.26
UBP1YDL122W DDR2P89113 61 aa0.9□□□□□ -2.26
UBP1YDL122W YLR255CO13574 117 aa0.9□□□□□ -2.27
UBP1YDL122W MRX7P53869 86 aa0.89□□□□□ -2.27
UBP1YDL122W YNL190WP53872 204 aa0.89□□□□□ -2.27
UBP1YDL122W YCR085WP25650 117 aa0.89□□□□□ -2.27
UBP1YDL122W NHP2P32495 156 aaPredicted RBP0.89□□□□□ -2.27
UBP1YDL122W YOR105WQ08504 108 aa0.89□□□□□ -2.27
UBP1YDL122W COX19Q3E731 98 aa0.89□□□□□ -2.27
UBP1YDL122W YNR034W-AQ3E841 98 aa0.89□□□□□ -2.27
UBP1YDL122W RPA12P32529 125 aaKnown RBP0.88□□□□□ -2.27
UBP1YDL122W PAU1P0CE88 120 aa0.88□□□□□ -2.27
UBP1YDL122W PAU14P0CE89 120 aa0.88□□□□□ -2.27
UBP1YDL122W PAU8P0CE92 120 aa0.88□□□□□ -2.27
UBP1YDL122W PAU11P0CE93 120 aa0.88□□□□□ -2.27
UBP1YDL122W PAU13P38725 120 aa0.88□□□□□ -2.27
UBP1YDL122W SHU1P38751 150 aa0.88□□□□□ -2.27
UBP1YDL122W PAU10Q03050 120 aa0.88□□□□□ -2.27
UBP1YDL122W PAU9Q3E770 120 aa0.88□□□□□ -2.27
UBP1YDL122W PAU4P53427 120 aa0.87□□□□□ -2.27
UBP1YDL122W PAU20Q08322 120 aa0.87□□□□□ -2.27
UBP1YDL122W YBR292CP38357 123 aa0.87□□□□□ -2.27
UBP1YDL122W RPL37AP49166 88 aaKnown RBP0.87□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms