RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C CCW14O13547 238 aa1.46□□□□□ -2.18
RRP42YDL111C HMRA2P0CY13 119 aa1.46□□□□□ -2.18
RRP42YDL111C HUR1P45820 110 aa1.46□□□□□ -2.18
RRP42YDL111C ICS3P47034 131 aa1.46□□□□□ -2.18
RRP42YDL111C NCE101Q02820 53 aa1.46□□□□□ -2.18
RRP42YDL111C YMR321CQ04898 105 aa1.46□□□□□ -2.18
RRP42YDL111C UBC4P15731 148 aa1.45□□□□□ -2.18
RRP42YDL111C YSY6P38374 65 aa1.45□□□□□ -2.18
RRP42YDL111C YMR141CP40211 102 aa1.45□□□□□ -2.18
RRP42YDL111C YIR020CP40575 100 aa1.45□□□□□ -2.18
RRP42YDL111C VPS55P47111 140 aa1.45□□□□□ -2.18
RRP42YDL111C YOR343CQ12484 108 aa1.45□□□□□ -2.18
RRP42YDL111C YDR381C-AQ3E6R5 114 aa1.45□□□□□ -2.18
RRP42YDL111C ROX3P25046 220 aa1.44□□□□□ -2.18
RRP42YDL111C AIM19P40502 157 aa1.44□□□□□ -2.18
RRP42YDL111C TOS6P48560 102 aa1.44□□□□□ -2.18
RRP42YDL111C MIX14Q04341 121 aa1.44□□□□□ -2.18
RRP42YDL111C YMR175W-AQ3E766 64 aa1.44□□□□□ -2.18
RRP42YDL111C YGR240C-AQ3E786 66 aa1.44□□□□□ -2.18
RRP42YDL111C SPI1P40092 148 aa1.43□□□□□ -2.18
RRP42YDL111C TOM7P53507 60 aa1.43□□□□□ -2.18
RRP42YDL111C YOR008C-AQ3E7B9 74 aa1.43□□□□□ -2.18
RRP42YDL111C MPC2P38857 129 aa1.42□□□□□ -2.18
RRP42YDL111C YDR182W-AQ3E796 67 aa1.42□□□□□ -2.18
RRP42YDL111C YLR342W-AQ3E810 57 aa1.42□□□□□ -2.18
RRP42YDL111C MIC10Q96VH5 97 aa1.42□□□□□ -2.18
RRP42YDL111C BRR2P32639 2163 aaKnown RBP1.42□□□□□ -2.18
RRP42YDL111C RPL37BP51402 88 aaKnown RBP1.41□□□□□ -2.18
RRP42YDL111C ICY1Q04329 127 aa1.41□□□□□ -2.18
RRP42YDL111C YOL118CQ08259 102 aa1.41□□□□□ -2.18
RRP42YDL111C YKL065W-AQ2V2P2 73 aa1.41□□□□□ -2.18
RRP42YDL111C YOR192C-CQ3E736 78 aa1.41□□□□□ -2.18
RRP42YDL111C PMD1P32634 1753 aa1.41□□□□□ -2.18
RRP42YDL111C YAL065CO13511 128 aa1.4□□□□□ -2.19
RRP42YDL111C YDL022C-AP0C5L6 82 aa1.4□□□□□ -2.19
RRP42YDL111C YBL071CP38185 102 aa1.4□□□□□ -2.19
RRP42YDL111C YHL005CP38752 130 aa1.4□□□□□ -2.19
RRP42YDL111C RSM18P40033 138 aa1.4□□□□□ -2.19
RRP42YDL111C YOR314WQ12506 109 aa1.4□□□□□ -2.19
RRP42YDL111C BLM10P43583 2143 aa1.39□□□□□ -2.19
RRP42YDL111C YJR107C-AP0CT86 78 aa1.39□□□□□ -2.19
RRP42YDL111C MRPS12P53732 153 aa1.39□□□□□ -2.19
RRP42YDL111C BPH1P25356 2167 aa1.38□□□□□ -2.19
RRP42YDL111C YHR214C-DP0CX93 97 aa1.38□□□□□ -2.19
RRP42YDL111C SHU1P38751 150 aa1.38□□□□□ -2.19
RRP42YDL111C IMP2P46972 177 aa1.38□□□□□ -2.19
RRP42YDL111C ERI1P62651 68 aaKnown RBP1.38□□□□□ -2.19
RRP42YDL111C YCL048W-AQ2V2Q2 79 aa1.38□□□□□ -2.19
RRP42YDL111C YDR246W-AQ3E763 66 aa1.38□□□□□ -2.19
RRP42YDL111C YER188C-AP0C0V2 99 aa1.37□□□□□ -2.19
RRP42YDL111C YJR128WP47162 119 aa1.37□□□□□ -2.19
RRP42YDL111C RRT15Q3E811 62 aa1.37□□□□□ -2.19
RRP42YDL111C NOP10Q6Q547 58 aaPredicted RBP1.37□□□□□ -2.19
RRP42YDL111C YOR032W-AQ8TGS1 66 aa1.37□□□□□ -2.19
RRP42YDL111C POL2P21951 2222 aaKnown RBP1.37□□□□□ -2.19
RRP42YDL111C RPS27AP35997 82 aaKnown RBP1.36□□□□□ -2.19
RRP42YDL111C RPS27BP38711 82 aa1.36□□□□□ -2.19
RRP42YDL111C YNL190WP53872 204 aa1.36□□□□□ -2.19
RRP42YDL111C HUB1Q6Q546 73 aa1.36□□□□□ -2.19
RRP42YDL111C RPL43AP0CX25 92 aaKnown RBP1.35□□□□□ -2.19
RRP42YDL111C RPL43BP0CX26 92 aa1.35□□□□□ -2.19
RRP42YDL111C LCL1Q02786 101 aa1.35□□□□□ -2.19
RRP42YDL111C YOR034C-AQ3E735 80 aa1.35□□□□□ -2.19
RRP42YDL111C RPL38P49167 78 aaKnown RBP1.34□□□□□ -2.19
RRP42YDL111C ATP18P81450 59 aa1.34□□□□□ -2.19
RRP42YDL111C YDR524C-BQ3E6R4 66 aa1.34□□□□□ -2.19
RRP42YDL111C YBR200W-AQ3E755 54 aa1.34□□□□□ -2.19
RRP42YDL111C YGR121W-AQ3E816 71 aa1.34□□□□□ -2.19
RRP42YDL111C YGR035W-AQ45U48 73 aa1.34□□□□□ -2.19
RRP42YDL111C YOL166W-AQ8TGJ1 51 aa1.34□□□□□ -2.19
RRP42YDL111C SEC16P48415 2195 aaKnown RBP1.34□□□□□ -2.2
RRP42YDL111C RPS30AP0CX33 63 aaKnown RBP1.33□□□□□ -2.2
RRP42YDL111C RPS30BP0CX34 63 aaKnown RBP1.33□□□□□ -2.2
RRP42YDL111C MRPL38P35996 138 aaPredicted RBP1.33□□□□□ -2.2
RRP42YDL111C YIL086CP40503 102 aa1.33□□□□□ -2.2
RRP42YDL111C EDC1P53080 175 aaPredicted RBP1.33□□□□□ -2.2
RRP42YDL111C SEN1Q00416 2231 aaKnown RBP1.32□□□□□ -2.2
RRP42YDL111C YFR009W-AP0C5M9 85 aa1.32□□□□□ -2.2
RRP42YDL111C SIP18P50263 79 aa1.32□□□□□ -2.2
RRP42YDL111C PMP3P87284 55 aa1.32□□□□□ -2.2
RRP42YDL111C YMR105W-AQ8TGS8 64 aa1.32□□□□□ -2.2
RRP42YDL111C RPL29P05747 59 aaPredicted RBP1.31□□□□□ -2.2
RRP42YDL111C YCR095W-AQ3E787 52 aa1.31□□□□□ -2.2
RRP42YDL111C YLL006W-AQ3E814 58 aa1.31□□□□□ -2.2
RRP42YDL111C YLR307C-AQ3E825 87 aa1.31□□□□□ -2.2
RRP42YDL111C SPC1P46965 94 aa1.3□□□□□ -2.2
RRP42YDL111C SNA2P56508 79 aa1.3□□□□□ -2.2
RRP42YDL111C SDH6Q3E785 79 aa1.3□□□□□ -2.2
RRP42YDL111C YMR001C-AQ8TGS9 76 aa1.3□□□□□ -2.2
RRP42YDL111C YIL046W-AQ3E7Z4 54 aa1.29□□□□□ -2.2
RRP42YDL111C YMR122W-AQ3E842 84 aa1.29□□□□□ -2.2
RRP42YDL111C YPR010C-AA5Z2X5 72 aa1.28□□□□□ -2.2
RRP42YDL111C RPL39P04650 51 aa1.28□□□□□ -2.2
RRP42YDL111C YLR157W-DP0CE99 70 aa1.28□□□□□ -2.2
RRP42YDL111C RPS11AP0CX47 156 aaKnown RBP1.28□□□□□ -2.2
RRP42YDL111C RPS11BP0CX48 156 aaKnown RBP1.28□□□□□ -2.2
RRP42YDL111C BSC4P53841 131 aa1.28□□□□□ -2.2
RRP42YDL111C ATP17Q06405 101 aa1.28□□□□□ -2.2
RRP42YDL111C YNL042W-BQ3E7Z2 85 aa1.28□□□□□ -2.2
RRP42YDL111C YOR011W-AQ3E807 68 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms