RNA–Protein interactions for RNA: YDL033C

SLM3, Transcript of tRNA-specific 2-thiouridylase, yeastyeast

Gene SLM3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLM3YDL033C ICY1Q04329 127 aa5.71□□□□□ -1.5
SLM3YDL033C RSM18P40033 138 aa5.7□□□□□ -1.5
SLM3YDL033C YNL277W-AQ3E7Z0 62 aa5.7□□□□□ -1.5
SLM3YDL033C YBR219CP38317 127 aa5.69□□□□□ -1.5
SLM3YDL033C SFT1P43682 97 aa5.69□□□□□ -1.5
SLM3YDL033C TDA8Q6B2U8 126 aa5.69□□□□□ -1.5
SLM3YDL033C YFR009W-AP0C5M9 85 aa5.68□□□□□ -1.5
SLM3YDL033C YDR182W-AQ3E796 67 aa5.68□□□□□ -1.5
SLM3YDL033C RPL36BO14455 100 aaKnown RBP5.67□□□□□ -1.5
SLM3YDL033C RPL36AP05745 100 aaPredicted RBP5.67□□□□□ -1.5
SLM3YDL033C CRC1Q12289 327 aa5.66□□□□□ -1.5
SLM3YDL033C NOP10Q6Q547 58 aaPredicted RBP5.66□□□□□ -1.5
SLM3YDL033C RPL26AP05743 127 aaKnown RBP5.65□□□□□ -1.5
SLM3YDL033C RPL29P05747 59 aaPredicted RBP5.65□□□□□ -1.5
SLM3YDL033C RPL26BP53221 127 aaKnown RBP5.65□□□□□ -1.5
SLM3YDL033C RPS11AP0CX47 156 aaKnown RBP5.64□□□□□ -1.51
SLM3YDL033C RPS11BP0CX48 156 aaKnown RBP5.64□□□□□ -1.51
SLM3YDL033C YPS5P53057 165 aa5.64□□□□□ -1.51
SLM3YDL033C AUA1P32450 94 aa5.62□□□□□ -1.51
SLM3YDL033C YLR162WQ06235 118 aa5.62□□□□□ -1.51
SLM3YDL033C YOR381W-AQ3E804 55 aa5.62□□□□□ -1.51
SLM3YDL033C YMR122W-AQ3E842 84 aa5.62□□□□□ -1.51
SLM3YDL033C YHL005CP38752 130 aa5.61□□□□□ -1.51
SLM3YDL033C ICS3P47034 131 aa5.61□□□□□ -1.51
SLM3YDL033C YDL241WQ07738 123 aa5.61□□□□□ -1.51
SLM3YDL033C YBR126W-AQ8TGU7 68 aa5.61□□□□□ -1.51
SLM3YDL033C MVB12P42939 101 aa5.6□□□□□ -1.51
SLM3YDL033C SPT4P32914 102 aaPredicted RBP5.59□□□□□ -1.51
SLM3YDL033C SMD1Q02260 146 aaPredicted RBP5.59□□□□□ -1.51
SLM3YDL033C YOR268CQ08734 132 aa5.59□□□□□ -1.51
SLM3YDL033C RRT15Q3E811 62 aa5.59□□□□□ -1.51
SLM3YDL033C YDR274CP87283 123 aa5.58□□□□□ -1.52
SLM3YDL033C YKL065W-AQ2V2P2 73 aa5.58□□□□□ -1.52
SLM3YDL033C YGR121W-AQ3E816 71 aa5.58□□□□□ -1.52
SLM3YDL033C YOL166W-AQ8TGJ1 51 aa5.58□□□□□ -1.52
SLM3YDL033C COX23P38824 151 aa5.57□□□□□ -1.52
SLM3YDL033C TAR1Q8TGM6 124 aa5.57□□□□□ -1.52
SLM3YDL033C MIC10Q96VH5 97 aa5.57□□□□□ -1.52
SLM3YDL033C EDC2P40023 145 aaPredicted RBP5.55□□□□□ -1.52
SLM3YDL033C YGR240C-AQ3E786 66 aa5.55□□□□□ -1.52
SLM3YDL033C RPS30AP0CX33 63 aaKnown RBP5.54□□□□□ -1.52
SLM3YDL033C RPS30BP0CX34 63 aaKnown RBP5.54□□□□□ -1.52
SLM3YDL033C FYV5P25585 152 aa5.54□□□□□ -1.52
SLM3YDL033C YIL102CP40488 101 aa5.54□□□□□ -1.52
SLM3YDL033C YBL039W-BP0C268 59 aa5.53□□□□□ -1.52
SLM3YDL033C AQY2P0CD90 149 aa5.53□□□□□ -1.52
SLM3YDL033C YOL014WQ08110 124 aa5.53□□□□□ -1.52
SLM3YDL033C SPC1P46965 94 aa5.52□□□□□ -1.53
SLM3YDL033C YNL162W-AQ3E7A8 72 aa5.52□□□□□ -1.53
SLM3YDL033C PEX22P39718 180 aa5.51□□□□□ -1.53
SLM3YDL033C MMS2P53152 137 aa5.51□□□□□ -1.53
SLM3YDL033C LIP1Q03579 150 aa5.51□□□□□ -1.53
SLM3YDL033C YHR213W-BQ8TGK1 99 aa5.51□□□□□ -1.53
SLM3YDL033C YPR010C-AA5Z2X5 72 aa5.5□□□□□ -1.53
SLM3YDL033C RPC10P40422 70 aa5.5□□□□□ -1.53
SLM3YDL033C YMR122CQ03879 124 aa5.5□□□□□ -1.53
SLM3YDL033C YBR230W-AQ3E762 66 aa5.5□□□□□ -1.53
SLM3YDL033C YJL127C-BQ3E828 52 aa5.5□□□□□ -1.53
SLM3YDL033C OST5Q92316 86 aa5.5□□□□□ -1.53
SLM3YDL033C HHF1P02309 103 aaKnown RBP5.49□□□□□ -1.53
SLM3YDL033C YJL133C-AQ3E7A3 74 aa5.48□□□□□ -1.53
SLM3YDL033C YAR023CD6VPM8 179 aa5.47□□□□□ -1.53
SLM3YDL033C YER188C-AP0C0V2 99 aa5.46□□□□□ -1.54
SLM3YDL033C HOT13P36078 116 aa5.46□□□□□ -1.54
SLM3YDL033C RDS3Q06835 107 aaPredicted RBP5.46□□□□□ -1.54
SLM3YDL033C YAL064WP39711 94 aa5.45□□□□□ -1.54
SLM3YDL033C YCR001WP25347 104 aa5.44□□□□□ -1.54
SLM3YDL033C YPR153WQ06537 140 aa5.43□□□□□ -1.54
SLM3YDL033C YNL042W-BQ3E7Z2 85 aa5.43□□□□□ -1.54
SLM3YDL033C HUB1Q6Q546 73 aa5.43□□□□□ -1.54
SLM3YDL033C ECM19Q06011 112 aa5.41□□□□□ -1.54
SLM3YDL033C YOL013W-AP0C272 63 aaPredicted RBP5.4□□□□□ -1.54
SLM3YDL033C YBL081WP38180 368 aaKnown RBP5.4□□□□□ -1.54
SLM3YDL033C IGD1P43598 195 aa5.4□□□□□ -1.54
SLM3YDL033C YBR182C-AQ8TGU6 64 aa5.4□□□□□ -1.54
SLM3YDL033C SDH6Q3E785 79 aa5.39□□□□□ -1.55
SLM3YDL033C YLR307C-AQ3E825 87 aa5.39□□□□□ -1.55
SLM3YDL033C Q0032Q9ZZX7 96 aa5.38□□□□□ -1.55
SLM3YDL033C RPL33AP05744 107 aaKnown RBP5.37□□□□□ -1.55
SLM3YDL033C RPL33BP41056 107 aaKnown RBP5.37□□□□□ -1.55
SLM3YDL033C YEL045CP32616 141 aa5.36□□□□□ -1.55
SLM3YDL033C YLR157W-DP0CE99 70 aa5.35□□□□□ -1.55
SLM3YDL033C YCR095W-AQ3E787 52 aa5.35□□□□□ -1.55
SLM3YDL033C YOR376W-AQ3E805 51 aa5.35□□□□□ -1.55
SLM3YDL033C SGF11Q03067 99 aa5.34□□□□□ -1.55
SLM3YDL033C DDR2P89113 61 aa5.33□□□□□ -1.56
SLM3YDL033C YMR001C-AQ8TGS9 76 aa5.33□□□□□ -1.56
SLM3YDL033C YML100W-AQ8TGT0 57 aa5.33□□□□□ -1.56
SLM3YDL033C DIF1O13577 133 aa5.32□□□□□ -1.56
SLM3YDL033C YOR072WQ08486 104 aa5.32□□□□□ -1.56
SLM3YDL033C YHR125WP38831 101 aa5.31□□□□□ -1.56
SLM3YDL033C YHR007C-AQ07074 71 aa5.31□□□□□ -1.56
SLM3YDL033C YAR064WP39563 99 aa5.3□□□□□ -1.56
SLM3YDL033C BSC4P53841 131 aa5.3□□□□□ -1.56
SLM3YDL033C GIS2P53849 153 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
SLM3YDL033C YDR115WQ04598 105 aa5.3□□□□□ -1.56
SLM3YDL033C YDR010CQ12426 110 aa5.3□□□□□ -1.56
SLM3YDL033C YGL034CP53186 121 aa5.29□□□□□ -1.56
SLM3YDL033C YGL041C-BQ3E750 60 aa5.29□□□□□ -1.56
SLM3YDL033C SNA2P56508 79 aa5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 52.1 ms