RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 LRRC52Q8N7C0 313 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 ELAC2Q9BQ52 826 aaKnown RBP17.73■□□□□ 0.43
PHGDH-229ENST00000641891 MAK16Q9BXY0 300 aaKnown RBP17.73■□□□□ 0.43
PHGDH-229ENST00000641891 FAM124BQ9H5Z6 455 aaPredicted RBP17.73■□□□□ 0.43
PHGDH-229ENST00000641891 RASA4BC9J798 803 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 RASA4O43374 803 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 PIAS1O75925 651 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 MYL3P08590 195 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 LMO2P25791 158 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 PSEN2P49810 448 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 KRT81Q14533 505 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 EFTUD2Q15029 972 aaKnown RBP eCLIP17.73■□□□□ 0.433e-6■■■■□ 23.9
PHGDH-229ENST00000641891 CCDC121Q6ZUS5 278 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 LRRN4Q8WUT4 740 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 KBTBD7Q8WVZ9 684 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 KIF9Q9HAQ2 790 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 HESX1Q9UBX0 185 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 CAPN7Q9Y6W3 813 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 TRIP12Q14669 1992 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-229ENST00000641891 SMIM28A0A1B0GU29 152 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 TCP11X1B4DZS4 312 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 DPYSL4O14531 572 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 MAP3K6O95382 1288 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 IL4RP24394 825 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 ADAM17P78536 824 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 BASP1P80723 227 aaKnown RBP17.72■□□□□ 0.43
PHGDH-229ENST00000641891 ROR1Q01973 937 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 SOX4Q06945 474 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-229ENST00000641891 NOMO1Q15155 1222 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 DARS2Q6PI48 645 aaKnown RBP17.72■□□□□ 0.43
PHGDH-229ENST00000641891 PIGWQ7Z7B1 504 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 PCGF5Q86SE9 256 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 TMEM110Q86TL2 294 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 CCDC197Q8NCU1 140 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 PDCD11Q14690 1871 aaKnown RBP17.72■□□□□ 0.43
PHGDH-229ENST00000641891 IGF2BP3O00425 579 aaKnown RBP eCLIP17.72■□□□□ 0.43
PHGDH-229ENST00000641891 SPAG7O75391 227 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 SSTR1P30872 391 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 ATXN1P54253 815 aaKnown RBP17.72■□□□□ 0.43
PHGDH-229ENST00000641891 PKN2Q16513 984 aaKnown RBP17.72■□□□□ 0.43
PHGDH-229ENST00000641891 UBXN11Q5T124 520 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 RNF157Q96PX1 679 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 SNRNP25Q9BV90 132 aaKnown RBP17.72■□□□□ 0.43
PHGDH-229ENST00000641891 UBN1Q9NPG3 1134 aa17.72■□□□□ 0.43
PHGDH-229ENST00000641891 UBQLN1Q9UMX0 589 aaKnown RBP17.72■□□□□ 0.43
PHGDH-229ENST00000641891 PIRO00625 290 aa17.71■□□□□ 0.43
PHGDH-229ENST00000641891 ATP2C2O75185 946 aa17.71■□□□□ 0.43
PHGDH-229ENST00000641891 CPP00450 1065 aa17.71■□□□□ 0.43
PHGDH-229ENST00000641891 SDC4P31431 198 aa17.71■□□□□ 0.43
PHGDH-229ENST00000641891 ARL4CP56559 192 aa17.71■□□□□ 0.43
PHGDH-229ENST00000641891 FBXO47Q5MNV8 452 aa17.71■□□□□ 0.43
PHGDH-229ENST00000641891 TRABD2AQ86V40 505 aa17.71■□□□□ 0.43
PHGDH-229ENST00000641891 P3H4Q92791 437 aa17.71■□□□□ 0.43
PHGDH-229ENST00000641891 MAGEB5Q9BZ81 275 aa17.71■□□□□ 0.43
PHGDH-229ENST00000641891 PCDH18Q9HCL0 1135 aa17.71■□□□□ 0.43
PHGDH-229ENST00000641891 FGFR1OP2Q9NVK5 253 aa17.71■□□□□ 0.43
PHGDH-229ENST00000641891 XPO7Q9UIA9 1087 aaKnown RBP17.71■□□□□ 0.43
PHGDH-229ENST00000641891 GOLGA6L7A0A1B0GV03 622 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 H7C0C1 242 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 LCP1P13796 627 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 CYP2B6P20813 491 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 ATP5OP48047 213 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 HDAC4P56524 1084 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 CDC42EP1Q00587 391 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 RIBC1Q8N443 379 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-229ENST00000641891 PQLC3Q8N755 202 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 PLD5Q8N7P1 536 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 ARRDC4Q8NCT1 418 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-229ENST00000641891 CKAP2Q8WWK9 683 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 KPNA7A9QM74 516 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 HAS3O00219 553 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 DNM1LO00429 736 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 FSBPO95073 299 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 SETSIPP0DME0 302 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 BBS9Q3SYG4 887 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 CST9Q5W186 159 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 FBXW10Q5XX13 1052 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 ARHGAP17Q68EM7 881 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 UNC93AQ86WB7 457 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 FBXO36Q8NEA4 188 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 PCDH19Q8TAB3 1148 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 PYROXD1Q8WU10 500 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 RRAGCQ9HB90 399 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 SAMD15Q9P1V8 674 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 RABGEF1Q9UJ41 708 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 HEY1Q9Y5J3 304 aa17.7■□□□□ 0.42
PHGDH-229ENST00000641891 NDC80O14777 642 aa17.69■□□□□ 0.42
PHGDH-229ENST00000641891 GNL1P36915 607 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-229ENST00000641891 TFDP2Q14188 446 aa17.69■□□□□ 0.42
PHGDH-229ENST00000641891 ZKSCAN8Q15776 578 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-229ENST00000641891 TTC31Q49AM3 519 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-229ENST00000641891 ANKRD20A8PQ5CZ79 823 aa17.69■□□□□ 0.42
PHGDH-229ENST00000641891 FAM47CQ5HY64 1035 aa17.69■□□□□ 0.42
PHGDH-229ENST00000641891 TDRPQ86YL5 185 aa17.69■□□□□ 0.42
PHGDH-229ENST00000641891 CCT6BQ92526 530 aa17.69■□□□□ 0.42
PHGDH-229ENST00000641891 NKIRAS1Q9NYS0 192 aa17.69■□□□□ 0.42
PHGDH-229ENST00000641891 ZMYND8Q9ULU4 1186 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-229ENST00000641891 ACTL7BQ9Y614 415 aa17.69■□□□□ 0.42
PHGDH-229ENST00000641891 CENPFP49454 3210 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms