RNA–Protein interactions for RNA: ENST00000641715.1

SAMMSON-221, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-221ENST00000641715 OVCA2Q8WZ82 227 aa12.47□□□□□ -0.41
SAMMSON-221ENST00000641715 MSANTD3Q96H12 275 aa12.47□□□□□ -0.41
SAMMSON-221ENST00000641715 TMEM176AQ96HP8 235 aa12.47□□□□□ -0.41
SAMMSON-221ENST00000641715 HEXIM2Q96MH2 286 aaKnown RBP12.47□□□□□ -0.41
SAMMSON-221ENST00000641715 SRRTQ9BXP5 876 aaKnown RBP12.47□□□□□ -0.41
SAMMSON-221ENST00000641715 LINC00597Q9H2U6 94 aa12.47□□□□□ -0.41
SAMMSON-221ENST00000641715 DUS2Q9NX74 493 aaKnown RBP12.47□□□□□ -0.41
SAMMSON-221ENST00000641715 WNT6Q9Y6F9 365 aa12.47□□□□□ -0.41
SAMMSON-221ENST00000641715 PROB1E7EW31 1015 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 LEFTY2O00292 366 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 PMM2O15305 246 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 LAMTOR5O43504 91 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 ZDHHC11BP0C7U3 371 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 SP9P0CG40 484 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 CUL2Q13617 745 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 PDGFRLQ15198 375 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 SNX30Q5VWJ9 437 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 TRIM59Q8IWR1 403 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 TTC39CQ8N584 583 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 JAKMIP2Q96AA8 810 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 MED15Q96RN5 788 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 DUSP16Q9BY84 665 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 CHRDQ9H2X0 955 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 FAM124BQ9H5Z6 455 aaPredicted RBP12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 RBM12Q9NTZ6 932 aaKnown RBP12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 COMMD8Q9NX08 183 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 SMPD4Q9NXE4 827 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 GMIPQ9P107 970 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 CPQQ9Y646 472 aa12.46□□□□□ -0.42
SAMMSON-221ENST00000641715 MYO16Q9Y6X6 1858 aa12.45□□□□□ -0.42
SAMMSON-221ENST00000641715 FANCMQ8IYD8 2048 aa12.45□□□□□ -0.42
SAMMSON-221ENST00000641715 COCHO43405 550 aa12.45□□□□□ -0.42
SAMMSON-221ENST00000641715 MARSP56192 900 aaKnown RBP12.45□□□□□ -0.42
SAMMSON-221ENST00000641715 GAS6Q14393 721 aa12.45□□□□□ -0.42
SAMMSON-221ENST00000641715 EML3Q32P44 896 aa12.45□□□□□ -0.42
SAMMSON-221ENST00000641715 LMO3Q8TAP4 145 aa12.45□□□□□ -0.42
SAMMSON-221ENST00000641715 DNAI2Q9GZS0 605 aa12.45□□□□□ -0.42
SAMMSON-221ENST00000641715 CLSTN2Q9H4D0 955 aa12.45□□□□□ -0.42
SAMMSON-221ENST00000641715 FBXO44Q9H4M3 255 aa12.45□□□□□ -0.42
SAMMSON-221ENST00000641715 CCSER2Q9H7U1 834 aa12.45□□□□□ -0.42
SAMMSON-221ENST00000641715 ECT2Q9H8V3 914 aa12.45□□□□□ -0.42
SAMMSON-221ENST00000641715 RWDD2AQ9UIY3 292 aa12.45□□□□□ -0.42
SAMMSON-221ENST00000641715 ZNF292O60281 2723 aa12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 ATG2BQ96BY7 2078 aa12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 GNA14O95837 355 aa12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 MBL2P11226 248 aaPredicted RBP12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 ACO1P21399 889 aaKnown RBP12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 GJA4P35212 333 aa12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 IFNAR2P48551 515 aa12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 CSTF1Q05048 431 aaKnown RBP12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 KCNH2Q12809 1159 aa12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 CCINQ13939 588 aa12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 HECTD3Q5T447 861 aa12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 NAIF1Q69YI7 327 aaPredicted RBP12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 UBR7Q8N806 425 aa12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 ATP2A3Q93084 1043 aa12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 ZFRQ96KR1 1074 aaKnown RBP12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 PNPLA8Q9NP80 782 aa12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 LMBRD1Q9NUN5 540 aa12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 FBXO4Q9UKT5 387 aa12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 R4GN57 208 aa12.44□□□□□ -0.42
SAMMSON-221ENST00000641715 PTPRZ1P23471 2315 aaPredicted RBP12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 TRDMT1O14717 391 aaKnown RBP12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 SCAMP3O14828 347 aaKnown RBP12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 P4HA2O15460 535 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 CYP26A1O43174 497 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 TBXAS1P24557 533 aaPredicted RBP12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 TUBP50607 506 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 KIF11P52732 1056 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 LRRC32Q14392 662 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 ZNF528Q3MIS6 628 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 TMEM196Q5HYL7 178 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 DGKKQ5KSL6 1271 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 ARHGAP17Q68EM7 881 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 TSSK4Q6SA08 328 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 MAMSTRQ6ZN01 415 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 Q6ZS52 159 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 ASCL5Q7RTU5 278 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 ADGRG2Q8IZP9 1017 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 CPA6Q8N4T0 437 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 KAT5Q92993 513 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 FBRSL1Q9HCM7 1045 aaKnown RBP12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 PRMT8Q9NR22 394 aaPredicted RBP12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 TLR8Q9NR97 1041 aaKnown RBP12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 OSER1Q9NX31 292 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 CFAP97Q9P2B7 532 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 SCML2Q9UQR0 700 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 MYOFQ9NZM1 2061 aa12.43□□□□□ -0.42
SAMMSON-221ENST00000641715 GFRA3O60609 400 aa12.42□□□□□ -0.42
SAMMSON-221ENST00000641715 FGFR1OPO95684 399 aaKnown RBP12.42□□□□□ -0.42
SAMMSON-221ENST00000641715 TBX18O95935 607 aa12.42□□□□□ -0.42
SAMMSON-221ENST00000641715 AFPP02771 609 aaKnown RBP12.42□□□□□ -0.42
SAMMSON-221ENST00000641715 CCDC192P0DO97 292 aa12.42□□□□□ -0.42
SAMMSON-221ENST00000641715 GALK1P51570 392 aa12.42□□□□□ -0.42
SAMMSON-221ENST00000641715 YWHAEP62258 255 aaKnown RBP12.42□□□□□ -0.42
SAMMSON-221ENST00000641715 CETN1Q12798 172 aa12.42□□□□□ -0.42
SAMMSON-221ENST00000641715 FSTL4Q6MZW2 842 aa12.42□□□□□ -0.42
SAMMSON-221ENST00000641715 TTC30AQ86WT1 665 aa12.42□□□□□ -0.42
SAMMSON-221ENST00000641715 IRF2BP1Q8IU81 584 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms