RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ACOT1Q86TX2 421 aa17.74■□□□□ 0.43
PHGDH-213ENST00000641272 NUP93Q8N1F7 819 aa17.74■□□□□ 0.43
PHGDH-213ENST00000641272 JAKMIP2Q96AA8 810 aa17.74■□□□□ 0.43
PHGDH-213ENST00000641272 CCSER2Q9H7U1 834 aa17.74■□□□□ 0.43
PHGDH-213ENST00000641272 DMAP1Q9NPF5 467 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-213ENST00000641272 FAM49BQ9NUQ9 324 aa17.74■□□□□ 0.43
PHGDH-213ENST00000641272 TPRP12270 2363 aaKnown RBP17.73■□□□□ 0.43
PHGDH-213ENST00000641272 FOXD2O60548 495 aaPredicted RBP17.73■□□□□ 0.43
PHGDH-213ENST00000641272 AP1G2O75843 785 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 ADH5P11766 374 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 PFKLP17858 780 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 TIE1P35590 1138 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 PPP3CCP48454 512 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 KMT5BQ4FZB7 885 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 STPG1Q5TH74 334 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 SPOPLQ6IQ16 392 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 PAQR9Q6ZVX9 377 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 ALLCQ8N6M5 410 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 MDGA1Q8NFP4 955 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 PARD3BQ8TEW8 1205 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 WBP2Q969T9 261 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 ZC3H10Q96K80 434 aaKnown RBP17.73■□□□□ 0.43
PHGDH-213ENST00000641272 ZFRQ96KR1 1074 aaKnown RBP17.73■□□□□ 0.43
PHGDH-213ENST00000641272 EDEM2Q9BV94 578 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 CGNQ9P2M7 1197 aaKnown RBP17.73■□□□□ 0.43
PHGDH-213ENST00000641272 CHORDC1Q9UHD1 332 aaPredicted RBP17.73■□□□□ 0.43
PHGDH-213ENST00000641272 MMP17Q9ULZ9 603 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 PCDHGA5Q9Y5G8 931 aa17.73■□□□□ 0.43
PHGDH-213ENST00000641272 ABCA7Q8IZY2 2146 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 A0A1B0GVL5 298 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 RTN3O95197 1032 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-213ENST00000641272 KLF8O95600 359 aaPredicted RBP17.72■□□□□ 0.43
PHGDH-213ENST00000641272 NR3C1P04150 777 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 PFKFB1P16118 471 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 PIK3CAP42336 1068 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 LY6G5CQ5SRR4 150 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 CEP135Q66GS9 1140 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 TMEM92Q6UXU6 159 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 FUKQ8N0W3 1084 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 TXNDC5Q8NBS9 432 aaKnown RBP17.72■□□□□ 0.43
PHGDH-213ENST00000641272 PDZD8Q8NEN9 1154 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 GOLGA5Q8TBA6 731 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 SMARCD1Q96GM5 515 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 PAGE5Q96GU1 130 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 ARHGEF4Q9NR80 690 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 VPS45Q9NRW7 570 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 ACACBO00763 2458 aa17.72■□□□□ 0.43
PHGDH-213ENST00000641272 CACNA1BQ00975 2339 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 CNOT1A5YKK6 2376 aaKnown RBP17.71■□□□□ 0.43
PHGDH-213ENST00000641272 SGK1O00141 431 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 SLC9A3R1O14745 358 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-213ENST00000641272 BEST1O76090 585 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 RHOBTB1O94844 696 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 KAT7O95251 611 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 ADH1CP00326 375 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 C4BPAP04003 597 aaKnown RBP17.71■□□□□ 0.43
PHGDH-213ENST00000641272 APODP05090 189 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 SLFN14P0C7P3 912 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 PRR29P0C7W0 189 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 ADORA2BP29275 332 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 PGFP49763 221 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 NDST1P52848 882 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 HECTD3Q5T447 861 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 EMC10Q5UCC4 262 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 PMS2CLQ68D20 193 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 RNF43Q68DV7 783 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 RHBDF2Q6PJF5 856 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 ARMCX6Q7L4S7 300 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 DDX42Q86XP3 938 aaKnown RBP eCLIP17.71■□□□□ 0.433e-6■■■□□ 16.1
PHGDH-213ENST00000641272 ADGRG2Q8IZP9 1017 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 NAT16Q8N8M0 369 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 ZMIZ2Q8NF64 920 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 SLC2A14Q8TDB8 520 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 RLN3Q8WXF3 142 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 TNIP3Q96KP6 325 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 CNOT6LQ96LI5 555 aaKnown RBP17.71■□□□□ 0.43
PHGDH-213ENST00000641272 PNKPQ96T60 521 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 SMOQ99835 787 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 NACA2Q9H009 215 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 KCTD10Q9H3F6 313 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 VRTNQ9H8Y1 702 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 EBF1Q9UH73 591 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 SH3BP1Q9Y3L3 701 aa17.71■□□□□ 0.43
PHGDH-213ENST00000641272 TNRC6BQ9UPQ9 1833 aaKnown RBP17.7■□□□□ 0.42
PHGDH-213ENST00000641272 MAP1BP46821 2468 aaKnown RBP17.7■□□□□ 0.42
PHGDH-213ENST00000641272 BCLAF3A2AJT9 711 aaKnown RBP17.7■□□□□ 0.42
PHGDH-213ENST00000641272 TNFRSF10BO14763 440 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 FAM163BP0C2L3 166 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 TRIM49P0CI25 452 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 TRIM49CP0CI26 452 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 CHRM1P11229 460 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-213ENST00000641272 LIMK1P53667 647 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 MAP3K7CLP57077 242 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 CRY1Q16526 586 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 GPRIN1Q7Z2K8 1008 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 RASSF3Q86WH2 238 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 BBS7Q8IWZ6 715 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 IL17RCQ8NAC3 791 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 ERLEC1Q96DZ1 483 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 MMRN2Q9H8L6 949 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms