RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 PCBP1Q15365 356 aaKnown RBP eCLIP9.35□□□□□ -0.91
NECAP1-217ENST00000639276 QPCTQ16769 361 aa9.35□□□□□ -0.91
NECAP1-217ENST00000639276 MSS51Q4VC12 460 aa9.35□□□□□ -0.91
NECAP1-217ENST00000639276 PPP6R3Q5H9R7 873 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-217ENST00000639276 RNASEH2BQ5TBB1 312 aaKnown RBP9.35□□□□□ -0.91
NECAP1-217ENST00000639276 UNC93AQ86WB7 457 aa9.35□□□□□ -0.91
NECAP1-217ENST00000639276 ANKMY2Q8IV38 441 aa9.35□□□□□ -0.91
NECAP1-217ENST00000639276 CRYBG2Q8N1P7 616 aa9.35□□□□□ -0.91
NECAP1-217ENST00000639276 NME8Q8N427 588 aa9.35□□□□□ -0.91
NECAP1-217ENST00000639276 ZCCHC9Q8N567 271 aaKnown RBP9.35□□□□□ -0.91
NECAP1-217ENST00000639276 TTC39CQ8N584 583 aa9.35□□□□□ -0.91
NECAP1-217ENST00000639276 ANKRD52Q8NB46 1076 aa9.35□□□□□ -0.91
NECAP1-217ENST00000639276 C3orf58Q8NDZ4 430 aa9.35□□□□□ -0.91
NECAP1-217ENST00000639276 MRRFQ96E11 262 aaKnown RBP9.35□□□□□ -0.91
NECAP1-217ENST00000639276 CCT8L2Q96SF2 557 aa9.35□□□□□ -0.91
NECAP1-217ENST00000639276 FAM129AQ9BZQ8 928 aa9.35□□□□□ -0.91
NECAP1-217ENST00000639276 TMPRSS4Q9NRS4 437 aa9.35□□□□□ -0.91
NECAP1-217ENST00000639276 GDAP2Q9NXN4 497 aa9.35□□□□□ -0.91
NECAP1-217ENST00000639276 LAMA2P24043 3122 aaKnown RBP9.34□□□□□ -0.91
NECAP1-217ENST00000639276 CYB561D2O14569 222 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 HUS1O60921 280 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 ENDOD1O94919 500 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 RBP3P10745 1247 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 GNAT1P11488 350 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 SDC4P31431 198 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-217ENST00000639276 CLCNKBP51801 687 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 GJA9P57773 515 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 PITX1P78337 314 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-217ENST00000639276 CACNB2Q08289 660 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-217ENST00000639276 IRF5Q13568 498 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 STILQ15468 1287 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 TNFAIP8L3Q5GJ75 292 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 FNBP1LQ5T0N5 605 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 ARHGAP17Q68EM7 881 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 CTU1Q7Z7A3 348 aaKnown RBP9.34□□□□□ -0.91
NECAP1-217ENST00000639276 NLRP14Q86W24 1093 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 CCDC13Q8IYE1 715 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 ARFGAP2Q8N6H7 521 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 NETO2Q8NC67 525 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 RNF169Q8NCN4 708 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 MYCBPAPQ8TBZ2 947 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 RSAD2Q8WXG1 361 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 CPT1BQ92523 772 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 PPP1R10Q96QC0 940 aaKnown RBP9.34□□□□□ -0.91
NECAP1-217ENST00000639276 MTG1Q9BT17 334 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-217ENST00000639276 SNRNP25Q9BV90 132 aaKnown RBP9.34□□□□□ -0.91
NECAP1-217ENST00000639276 TMEM109Q9BVC6 243 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 MAK16Q9BXY0 300 aaKnown RBP9.34□□□□□ -0.91
NECAP1-217ENST00000639276 MLXIPLQ9NP71 852 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 HEY1Q9Y5J3 304 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 I3L4J1 428 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 APOC4-APOC2K7ER74 178 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 CA12O43570 354 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 APOC2P02655 101 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 ASGR1P07306 291 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 MMP13P45452 471 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 INHBEP58166 350 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 BST2Q10589 180 aaKnown RBP9.34□□□□□ -0.91
NECAP1-217ENST00000639276 KRT81Q14533 505 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 ACAP1Q15027 740 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 PAN2Q504Q3 1202 aaKnown RBP9.34□□□□□ -0.91
NECAP1-217ENST00000639276 TAF2Q6P1X5 1199 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 PAQR9Q6ZVX9 377 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 ZBED8Q8IZ13 594 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 FUKQ8N0W3 1084 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 PYROXD2Q8N2H3 581 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 PQLC3Q8N755 202 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 B3GALNT2Q8NCR0 500 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 ZNF473Q8WTR7 871 aaKnown RBP9.34□□□□□ -0.91
NECAP1-217ENST00000639276 PRCCQ92733 491 aaPredicted RBP9.34□□□□□ -0.91
NECAP1-217ENST00000639276 ZNF560Q96MR9 790 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 PCDH9Q9HC56 1237 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 FAM105AQ9NUU6 356 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 EFR3BQ9Y2G0 817 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 NR2E3Q9Y5X4 410 aa9.34□□□□□ -0.91
NECAP1-217ENST00000639276 SCN10AQ9Y5Y9 1956 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 SYNJ2BP-COX16A0A087WUM0 186 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 CASTOR2A6NHX0 329 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 TRAPPC3O43617 180 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 MGEA5O60502 916 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 AGTP01019 485 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 BCAT1P54687 386 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 PDIA2Q13087 525 aaKnown RBP9.33□□□□□ -0.92
NECAP1-217ENST00000639276 LRRC14Q15048 493 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 KCNA10Q16322 511 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 DARS2Q6PI48 645 aaKnown RBP9.33□□□□□ -0.92
NECAP1-217ENST00000639276 LIMS2Q7Z4I7 341 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 PIGZQ86VD9 579 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 CCDC185Q8N715 623 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 PLD5Q8N7P1 536 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 BBOF1Q8ND07 529 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 PCDH19Q8TAB3 1148 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 MGARPQ8TDB4 240 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 RNF157Q96PX1 679 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 TSPYL2Q9H2G4 693 aaPredicted RBP9.33□□□□□ -0.92
NECAP1-217ENST00000639276 RSAD1Q9HA92 442 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 PCDH18Q9HCL0 1135 aa9.33□□□□□ -0.92
NECAP1-217ENST00000639276 CWC15Q9P013 229 aaKnown RBP9.33□□□□□ -0.92
NECAP1-217ENST00000639276 COX16Q9P0S2 106 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms