RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 OCEL1Q9H607 264 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 PIDD1Q9HB75 910 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 FBXL21Q9UKT6 434 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 ATP10AO60312 1499 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 IFT140Q96RY7 1462 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 THOC2Q8NI27 1593 aaKnown RBP4.46□□□□□ -1.7
SCN3A-209ENST00000639244 STAT5BP51692 787 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 CENPCQ03188 943 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 SNX17Q15036 470 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 LSM12Q3MHD2 195 aaKnown RBP4.46□□□□□ -1.7
SCN3A-209ENST00000639244 THEM4Q5T1C6 240 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 RNF219Q5W0B1 726 aaPredicted RBP4.46□□□□□ -1.7
SCN3A-209ENST00000639244 HAUS3Q68CZ6 603 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 SLC6A19Q695T7 634 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 TMTC1Q8IUR5 882 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 OR8H3Q8N146 312 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 NOA1Q8NC60 698 aaKnown RBP4.46□□□□□ -1.7
SCN3A-209ENST00000639244 RAB7BQ96AH8 199 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 VPS33AQ96AX1 596 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 TMEM79Q9BSE2 394 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 TM9SF3Q9HD45 589 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 ZNF112Q9UJU3 913 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 KCNH4Q9UQ05 1017 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 CRYL1Q9Y2S2 319 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 INPPL1O15357 1258 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 ZBTB24O43167 697 aaPredicted RBP4.46□□□□□ -1.7
SCN3A-209ENST00000639244 OPHN1O60890 802 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 TYK2P29597 1187 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 CD79BP40259 229 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 PSMC5P62195 406 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 MAP3K12Q12852 859 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 CYP27C1Q4G0S4 372 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 KRT40Q6A162 431 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 XKR5Q6UX68 686 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 RFX6Q8HWS3 928 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 CCDC197Q8NCU1 140 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 DGCR14Q96DF8 476 aaKnown RBP4.46□□□□□ -1.7
SCN3A-209ENST00000639244 C19orf60Q96EN9 201 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 BMP2KQ9NSY1 1161 aaPredicted RBP4.46□□□□□ -1.7
SCN3A-209ENST00000639244 TRPM5Q9NZQ8 1165 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 SIRPGQ9P1W8 387 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 UXTQ9UBK9 157 aaPredicted RBP4.46□□□□□ -1.7
SCN3A-209ENST00000639244 MED12LQ86YW9 2145 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 NSD2O96028 1365 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 RAPGEF2Q9Y4G8 1499 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 TRAV20A0A0B4J274 112 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 SMAD6O43541 496 aaKnown RBP4.46□□□□□ -1.7
SCN3A-209ENST00000639244 MYO1DO94832 1006 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 GSTM1P09488 218 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 RRM2P31350 389 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 GNG11P61952 73 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 CDC20Q12834 499 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 SMCO1Q147U7 214 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 STARD3Q14849 445 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 FAM47CQ5HY64 1035 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 FAM102BQ5T8I3 360 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 LRIG3Q6UXM1 1119 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 COPS6Q7L5N1 327 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 TREML1Q86YW5 311 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 MAP4K3Q8IVH8 894 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 ULK2Q8IYT8 1036 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 GPRASP2Q96D09 838 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 STRBPQ96SI9 672 aaKnown RBP4.46□□□□□ -1.7
SCN3A-209ENST00000639244 GPR61Q9BZJ8 451 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 SARS2Q9NP81 518 aaKnown RBP4.46□□□□□ -1.7
SCN3A-209ENST00000639244 DDX19AQ9NUU7 478 aaKnown RBP4.46□□□□□ -1.7
SCN3A-209ENST00000639244 ZSCAN32Q9NX65 697 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 GDAP2Q9NXN4 497 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 A0A1W2PQ67 120 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 LOC390937A0A1W2PQ73 354 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 A0A1W2PRG6 482 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 FANCGO15287 622 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 CLOCKO15516 846 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 SMPD2O60906 423 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 CIB2O75838 187 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 SUN1O94901 812 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 ADH1CP00326 375 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 GHRP10912 638 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 MPP1Q00013 466 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 SLFN12LQ6IEE8 588 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 NIPAL1Q6NVV3 410 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 ARMCX5Q6P1M9 558 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 KDM7AQ6ZMT4 941 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 C15orf52Q6ZUT6 534 aaKnown RBP4.46□□□□□ -1.7
SCN3A-209ENST00000639244 CCNJLQ8IV13 435 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 CTAGE3PQ8IX95 158 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 DNAJC11Q9NVH1 559 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 MAP3K15Q6ZN16 1313 aa4.46□□□□□ -1.7
SCN3A-209ENST00000639244 A0A1B0GVL5 298 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 FOXP2O15409 715 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 GOSR1O95249 250 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 GNA14O95837 355 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 OPN1LWP04000 364 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 CYP3A4P08684 503 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 ESRRAP11474 423 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 MAPK8P45983 427 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SGCAQ16586 387 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 GLE1Q53GS7 698 aaKnown RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 TMEM132EQ6IEE7 984 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 RETSATQ6NUM9 610 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms