RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 FAM58BPP0C7Q3 252 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 ATP6V1B2P21281 511 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 MUTP22033 750 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 PCSK1P29120 753 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 RAP1GAPP47736 663 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 MCL1Q07820 350 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 ARHGEF7Q14155 803 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 PRR5LQ6MZQ0 368 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 HS6ST3Q8IZP7 471 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 KIAA0895Q8NCT3 520 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 ANKRD27Q96NW4 1050 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 USP18Q9UMW8 372 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 LINC00854A0A1B0GVQ3 168 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 HEATR9A2RTY3 570 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 GRK2P25098 689 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 PWP1Q13610 501 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 MFSD14CQ5VZR4 134 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 DDIT4Q9NX09 232 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 C19orf81C9J6K1 198 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 LRRC8DQ7L1W4 858 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 TMPRSS6Q8IU80 811 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 RDM1Q8NG50 284 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 UBE2OQ9C0C9 1292 aaKnown RBP19.09■□□□□ 0.65
SCARB2-213ENST00000638680 A0A1B0GW55 424 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 DUX4L2P0CJ85 424 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 DUX4L3P0CJ86 424 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 DUX4L4P0CJ87 422 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 DUX4L5P0CJ88 424 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 DUX4L6P0CJ89 424 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 DUX4L7P0CJ90 424 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 MAPRE1Q15691 268 aaKnown RBP19.09■□□□□ 0.65
SCARB2-213ENST00000638680 TCHHL1Q5QJ38 904 aaPredicted RBP19.09■□□□□ 0.65
SCARB2-213ENST00000638680 TAS1R2Q8TE23 839 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 PRCCQ92733 491 aaPredicted RBP19.09■□□□□ 0.65
SCARB2-213ENST00000638680 DUX4Q9UBX2 424 aa19.09■□□□□ 0.65
SCARB2-213ENST00000638680 ZC3H11AO75152 810 aaKnown RBP eCLIP19.08■□□□□ 0.65
SCARB2-213ENST00000638680 KLRK1P26718 216 aa19.08■□□□□ 0.65
SCARB2-213ENST00000638680 SARSP49591 514 aaKnown RBP19.08■□□□□ 0.65
SCARB2-213ENST00000638680 SNX17Q15036 470 aa19.08■□□□□ 0.65
SCARB2-213ENST00000638680 SAC3D1A6NKF1 404 aa19.08■□□□□ 0.65
SCARB2-213ENST00000638680 SOX6P35712 828 aa19.08■□□□□ 0.65
SCARB2-213ENST00000638680 CHSY1Q86X52 802 aa19.08■□□□□ 0.65
SCARB2-213ENST00000638680 MTERF3Q96E29 417 aa19.08■□□□□ 0.65
SCARB2-213ENST00000638680 OXNAD1Q96HP4 312 aaPredicted RBP19.08■□□□□ 0.65
SCARB2-213ENST00000638680 ZNF512Q96ME7 567 aaPredicted RBP19.08■□□□□ 0.65
SCARB2-213ENST00000638680 SIKE1Q9BRV8 207 aa19.08■□□□□ 0.65
SCARB2-213ENST00000638680 PIDD1Q9HB75 910 aa19.08■□□□□ 0.65
SCARB2-213ENST00000638680 LSM7Q9UK45 103 aaKnown RBP19.08■□□□□ 0.65
SCARB2-213ENST00000638680 TCF7P36402 384 aaPredicted RBP19.08■□□□□ 0.64
SCARB2-213ENST00000638680 NPTX2P47972 431 aa19.08■□□□□ 0.64
SCARB2-213ENST00000638680 NTRK3Q16288 839 aa19.08■□□□□ 0.64
SCARB2-213ENST00000638680 LPCAT2Q7L5N7 544 aa19.08■□□□□ 0.64
SCARB2-213ENST00000638680 TSEN2Q8NCE0 465 aaKnown RBP19.08■□□□□ 0.64
SCARB2-213ENST00000638680 SLC5A5Q92911 643 aa19.08■□□□□ 0.64
SCARB2-213ENST00000638680 TLR10Q9BXR5 811 aa19.08■□□□□ 0.64
SCARB2-213ENST00000638680 AAR2Q9Y312 384 aaKnown RBP19.08■□□□□ 0.64
SCARB2-213ENST00000638680 MZF1P28698 734 aaPredicted RBP19.08■□□□□ 0.64
SCARB2-213ENST00000638680 TAF6P49848 677 aa19.08■□□□□ 0.64
SCARB2-213ENST00000638680 TCP10LQ8TDR4 215 aa19.08■□□□□ 0.64
SCARB2-213ENST00000638680 GOLGA8TH3BQL2 631 aa19.08■□□□□ 0.64
SCARB2-213ENST00000638680 FCHO1O14526 889 aa19.08■□□□□ 0.64
SCARB2-213ENST00000638680 SLC1A6P48664 564 aa19.08■□□□□ 0.64
SCARB2-213ENST00000638680 PKN1Q16512 942 aa19.08■□□□□ 0.64
SCARB2-213ENST00000638680 ZNF720Q7Z2F6 126 aa19.08■□□□□ 0.64
SCARB2-213ENST00000638680 EHD4Q9H223 541 aa19.08■□□□□ 0.64
SCARB2-213ENST00000638680 HBP1O60381 514 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 RASSF9O75901 435 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 ARP10275 920 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 VDRP11473 427 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 R3HDM1Q15032 1099 aaKnown RBP19.07■□□□□ 0.64
SCARB2-213ENST00000638680 CYP51A1Q16850 503 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 GJC2Q5T442 439 aaPredicted RBP19.07■□□□□ 0.64
SCARB2-213ENST00000638680 UGT3A1Q6NUS8 523 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 ACOT1Q86TX2 421 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.07■□□□□ 0.64
SCARB2-213ENST00000638680 GPRASP2Q96D09 838 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 CATSPER2Q96P56 530 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 GPRC5DQ9NZD1 345 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 SPASTQ9UBP0 616 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 MRNIPQ6NTE8 343 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 PPP2R3CQ969Q6 453 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 APOL2Q9BQE5 337 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 CINPQ9BW66 212 aaPredicted RBP19.07■□□□□ 0.64
SCARB2-213ENST00000638680 ERAP1Q9NZ08 941 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 NINJ2Q9NZG7 142 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 KANSL1LA0AUZ9 987 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 CES2O00748 559 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 MGAT5BQ3V5L5 792 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 XRRA1Q6P2D8 792 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 HEATR4Q86WZ0 1026 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 MICALL2Q8IY33 904 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 ZNF518BQ9C0D4 1074 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 PNMA8BQ9ULN7 279 aaPredicted RBP19.07■□□□□ 0.64
SCARB2-213ENST00000638680 SLCO1B7G3V0H7 640 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 PRIM2P49643 509 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 TRIP4Q15650 581 aaPredicted RBP19.07■□□□□ 0.64
SCARB2-213ENST00000638680 NT5DC1Q5TFE4 455 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 MOXD1Q6UVY6 613 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 LRRC74BQ6ZQY2 392 aa19.07■□□□□ 0.64
SCARB2-213ENST00000638680 EMC1Q8N766 993 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms