RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 LINC00597Q9H2U6 94 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 CFAP97Q9P2B7 532 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 TBC1D14Q9P2M4 693 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 HMGXB4Q9UGU5 601 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 PCDHA5Q9Y5H7 936 aa20.07■□□□□ 0.8
CLN6-221ENST00000637494 TNFRSF10BO14763 440 aa20.06■□□□□ 0.8
CLN6-221ENST00000637494 RNF40O75150 1001 aa20.06■□□□□ 0.8
CLN6-221ENST00000637494 EGFP01133 1207 aa20.06■□□□□ 0.8
CLN6-221ENST00000637494 HOXA6P31267 233 aa20.06■□□□□ 0.8
CLN6-221ENST00000637494 ID4P47928 161 aa20.06■□□□□ 0.8
CLN6-221ENST00000637494 TUBP50607 506 aa20.06■□□□□ 0.8
CLN6-221ENST00000637494 LRRC63Q05C16 580 aa20.06■□□□□ 0.8
CLN6-221ENST00000637494 SIM2Q14190 667 aaPredicted RBP20.06■□□□□ 0.8
CLN6-221ENST00000637494 DCAF17Q5H9S7 520 aaPredicted RBP20.06■□□□□ 0.8
CLN6-221ENST00000637494 FILIP1Q7Z7B0 1213 aa20.06■□□□□ 0.8
CLN6-221ENST00000637494 C12orf29Q8N999 325 aa20.06■□□□□ 0.8
CLN6-221ENST00000637494 EEF2KMTQ96G04 330 aa20.06■□□□□ 0.8
CLN6-221ENST00000637494 HNRNPABQ99729 332 aaKnown RBP20.06■□□□□ 0.8
CLN6-221ENST00000637494 SMOQ99835 787 aa20.06■□□□□ 0.8
CLN6-221ENST00000637494 APOBEC3GQ9HC16 384 aaKnown RBP20.06■□□□□ 0.8
CLN6-221ENST00000637494 CSNK1G1Q9HCP0 422 aa20.06■□□□□ 0.8
CLN6-221ENST00000637494 TLR8Q9NR97 1041 aaKnown RBP20.06■□□□□ 0.8
CLN6-221ENST00000637494 RAB20Q9NX57 234 aa20.06■□□□□ 0.8
CLN6-221ENST00000637494 SH3BP1Q9Y3L3 701 aa20.06■□□□□ 0.8
CLN6-221ENST00000637494 K7ESF4 209 aa20.05■□□□□ 0.8
CLN6-221ENST00000637494 PSMA7O14818 248 aa20.05■□□□□ 0.8
CLN6-221ENST00000637494 CILPO75339 1184 aa20.05■□□□□ 0.8
CLN6-221ENST00000637494 SNX30Q5VWJ9 437 aa20.05■□□□□ 0.8
CLN6-221ENST00000637494 LAIR1Q6GTX8 287 aa20.05■□□□□ 0.8
CLN6-221ENST00000637494 CEP68Q76N32 757 aa20.05■□□□□ 0.8
CLN6-221ENST00000637494 DCLK2Q8N568 766 aa20.05■□□□□ 0.8
CLN6-221ENST00000637494 ACDQ96AP0 544 aa20.05■□□□□ 0.8
CLN6-221ENST00000637494 IL37Q9NZH6 218 aa20.05■□□□□ 0.8
CLN6-221ENST00000637494 GMIPQ9P107 970 aa20.05■□□□□ 0.8
CLN6-221ENST00000637494 MYO15AQ9UKN7 3530 aa20.04■□□□□ 0.8
CLN6-221ENST00000637494 E2F8A0AVK6 867 aa20.04■□□□□ 0.8
CLN6-221ENST00000637494 COCHO43405 550 aa20.04■□□□□ 0.8
CLN6-221ENST00000637494 ADH1CP00326 375 aa20.04■□□□□ 0.8
CLN6-221ENST00000637494 ZXDBP98169 803 aa20.04■□□□□ 0.8
CLN6-221ENST00000637494 GOLGA8FQ08AF8 430 aa20.04■□□□□ 0.8
CLN6-221ENST00000637494 GOLGA8DPQ0D2H9 430 aa20.04■□□□□ 0.8
CLN6-221ENST00000637494 WDR5BQ86VZ2 330 aa20.04■□□□□ 0.8
CLN6-221ENST00000637494 ELOA2Q8IYF1 753 aaPredicted RBP20.04■□□□□ 0.8
CLN6-221ENST00000637494 ZMIZ2Q8NF64 920 aa20.04■□□□□ 0.8
CLN6-221ENST00000637494 JAKMIP2Q96AA8 810 aa20.04■□□□□ 0.8
CLN6-221ENST00000637494 OTUB2Q96DC9 234 aa20.04■□□□□ 0.8
CLN6-221ENST00000637494 FAM124BQ9H5Z6 455 aaPredicted RBP20.04■□□□□ 0.8
CLN6-221ENST00000637494 PNPLA8Q9NP80 782 aa20.04■□□□□ 0.8
CLN6-221ENST00000637494 ARMCX3Q9UH62 379 aaPredicted RBP20.04■□□□□ 0.8
CLN6-221ENST00000637494 FAM92AA1XBS5 289 aa20.03■□□□□ 0.8
CLN6-221ENST00000637494 SLC8A3P57103 927 aa20.03■□□□□ 0.8
CLN6-221ENST00000637494 MCCD1P59942 119 aaPredicted RBP20.03■□□□□ 0.8
CLN6-221ENST00000637494 ANKRD40Q6AI12 368 aa20.03■□□□□ 0.8
CLN6-221ENST00000637494 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.03■□□□□ 0.8
CLN6-221ENST00000637494 ADGRG2Q8IZP9 1017 aa20.03■□□□□ 0.8
CLN6-221ENST00000637494 CAMKK1Q8N5S9 505 aa20.03■□□□□ 0.8
CLN6-221ENST00000637494 RPLP0P6Q8NHW5 317 aa20.03■□□□□ 0.8
CLN6-221ENST00000637494 SPATA20Q8TB22 786 aa20.03■□□□□ 0.8
CLN6-221ENST00000637494 ERCC4Q92889 916 aaPredicted RBP20.03■□□□□ 0.8
CLN6-221ENST00000637494 DHTKD1Q96HY7 919 aaPredicted RBP20.03■□□□□ 0.8
CLN6-221ENST00000637494 HEXIM2Q96MH2 286 aaKnown RBP20.03■□□□□ 0.8
CLN6-221ENST00000637494 TWNKQ96RR1 684 aa20.03■□□□□ 0.8
CLN6-221ENST00000637494 CCSER2Q9H7U1 834 aa20.03■□□□□ 0.8
CLN6-221ENST00000637494 METTL14Q9HCE5 456 aaKnown RBP20.03■□□□□ 0.8
CLN6-221ENST00000637494 FBRSL1Q9HCM7 1045 aaKnown RBP20.03■□□□□ 0.8
CLN6-221ENST00000637494 CCDC163A0A0D9SF12 145 aa20.02■□□□□ 0.8
CLN6-221ENST00000637494 BEST1O76090 585 aa20.02■□□□□ 0.8
CLN6-221ENST00000637494 CYP17A1P05093 508 aa20.02■□□□□ 0.8
CLN6-221ENST00000637494 ZDHHC11BP0C7U3 371 aa20.02■□□□□ 0.8
CLN6-221ENST00000637494 ACO1P21399 889 aaKnown RBP20.02■□□□□ 0.8
CLN6-221ENST00000637494 YWHAEP62258 255 aaKnown RBP20.02■□□□□ 0.8
CLN6-221ENST00000637494 DMWDQ09019 674 aa20.02■□□□□ 0.8
CLN6-221ENST00000637494 DHCR24Q15392 516 aa20.02■□□□□ 0.8
CLN6-221ENST00000637494 LPAL2Q16609 132 aa20.02■□□□□ 0.8
CLN6-221ENST00000637494 ZNF394Q53GI3 561 aa20.02■□□□□ 0.8
CLN6-221ENST00000637494 BTBD8Q5XKL5 378 aa20.02■□□□□ 0.8
CLN6-221ENST00000637494 CLEC20AQ6ZU45 233 aa20.02■□□□□ 0.8
CLN6-221ENST00000637494 TADA2BQ86TJ2 420 aa20.02■□□□□ 0.8
CLN6-221ENST00000637494 USP18Q9UMW8 372 aa20.02■□□□□ 0.8
CLN6-221ENST00000637494 SCML2Q9UQR0 700 aa20.02■□□□□ 0.8
CLN6-221ENST00000637494 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.01■□□□□ 0.79
CLN6-221ENST00000637494 TLR5O60602 858 aa20.01■□□□□ 0.79
CLN6-221ENST00000637494 SDHBP21912 280 aa20.01■□□□□ 0.79
CLN6-221ENST00000637494 ATP5C1P36542 298 aaKnown RBP20.01■□□□□ 0.79
CLN6-221ENST00000637494 PREPLQ4J6C6 727 aaPredicted RBP20.01■□□□□ 0.79
CLN6-221ENST00000637494 PKN3Q6P5Z2 889 aa20.01■□□□□ 0.79
CLN6-221ENST00000637494 SEMA4DQ92854 862 aa20.01■□□□□ 0.79
CLN6-221ENST00000637494 TMEM176AQ96HP8 235 aa20.01■□□□□ 0.79
CLN6-221ENST00000637494 PNKPQ96T60 521 aa20.01■□□□□ 0.79
CLN6-221ENST00000637494 DUSP16Q9BY84 665 aa20.01■□□□□ 0.79
CLN6-221ENST00000637494 CISHQ9NSE2 258 aa20.01■□□□□ 0.79
CLN6-221ENST00000637494 C2orf42Q9NWW7 574 aa20.01■□□□□ 0.79
CLN6-221ENST00000637494 LSM7Q9UK45 103 aaKnown RBP20.01■□□□□ 0.79
CLN6-221ENST00000637494 FAM186AA6NE01 2351 aa20.01■□□□□ 0.79
CLN6-221ENST00000637494 VPS13AQ96RL7 3174 aa20.01■□□□□ 0.79
CLN6-221ENST00000637494 PTPRZ1P23471 2315 aaPredicted RBP20.01■□□□□ 0.79
CLN6-221ENST00000637494 BICDL2A1A5D9 508 aa20■□□□□ 0.79
CLN6-221ENST00000637494 HRO43593 1189 aa20■□□□□ 0.79
CLN6-221ENST00000637494 APODP05090 189 aa20■□□□□ 0.79
CLN6-221ENST00000637494 RETP07949 1114 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms