RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	SCN4B	Q8IWT1	228 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	SYCE1	Q8N0S2	351 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	MRPL43	Q8N983	215 aa	Known RBP	10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	JOSD2	Q8TAC2	188 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	FNIP1	Q8TF40	1166 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	IRGQ	Q8WZA9	623 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	BTBD6	Q96KE9	485 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	SPATA17	Q96L03	361 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	KLHL5	Q96PQ7	755 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	SEPT5	Q99719	369 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	EMILIN2	Q9BXX0	1053 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	ULBP1	Q9BZM6	244 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	NKX2-4	Q9H2Z4	354 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	GOLPH3	Q9H4A6	298 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	NGRN	Q9NPE2	291 aa	Known RBP	10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	RRAGD	Q9NQL2	400 aa	Predicted RBP	10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	ENTPD7	Q9NQZ7	604 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	ASNSD1	Q9NWL6	643 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	JRKL	Q9Y4A0	524 aa		10.07	□□□□□ -0.8
CACNA1A-223	ENST00000636058	PLXNA3	P51805	1871 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	GREB1	Q4ZG55	1949 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	FAM92A	A1XBS5	289 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	C2CD4B	A6NLJ0	364 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	HIDE1	A8MVS5	230 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	DPYSL4	O14531	572 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	HSF2BP	O75031	334 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	SOAT2	O75908	522 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	PROSC	O94903	275 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	ADH1A	P07327	375 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	GLI1	P08151	1106 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	USP17L7	P0C7H9	530 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	ATF6	P18850	670 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	MAN1A1	P33908	653 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	FLT3	P36888	993 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	RPL10A	P62906	217 aa	Known RBP	10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	GPM6B	Q13491	265 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	EFHC1	Q5JVL4	640 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	MEI1	Q5TIA1	1274 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	SDHAF4	Q5VUM1	108 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	PLPP4	Q5VZY2	271 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	PPP2R2D	Q66LE6	453 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	PDE12	Q6L8Q7	609 aa	Known RBP	10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	TRNP1	Q6NT89	227 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	LILRA6	Q6PI73	481 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	NT5DC3	Q86UY8	548 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	TCEAL8	Q8IYN2	117 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	NUP93	Q8N1F7	819 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	EMC1	Q8N766	993 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	NIPA2	Q8N8Q9	360 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	SCAMP5	Q8TAC9	235 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	NDRG1	Q92597	394 aa	Known RBP	10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	NAPG	Q99747	312 aa	Predicted RBP	10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	CYP4F11	Q9HBI6	524 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	COMMD8	Q9NX08	183 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	IL37	Q9NZH6	218 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	IP6K2	Q9UHH9	426 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	ALG6	Q9Y672	507 aa		10.06	□□□□□ -0.8
CACNA1A-223	ENST00000636058	ATG2A	Q2TAZ0	1938 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	MYO16	Q9Y6X6	1858 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	CTAGE9	A4FU28	777 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	YJEFN3	A6XGL0	299 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	TMEM110-MUSTN1	A8MSY1	372 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058		E7ENQ6	273 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	ENC1	O14682	589 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	TGM5	O43548	720 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	DAB1	O75553	588 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	GRAP2	O75791	330 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	RTN3	O95197	1032 aa	Predicted RBP	10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	FTCD	O95954	541 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	C1R	P00736	705 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	ATP1A1	P05023	1023 aa	Known RBP	10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	FYN	P06241	537 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	GPD1	P21695	349 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	COMT	P21964	271 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	CASQ1	P31415	396 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	CA8	P35219	290 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	IRS1	P35568	1242 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	SLC1A1	P43005	524 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	ZNF143	P52747	638 aa	Predicted RBP	10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	RNASE9	P60153	205 aa	Known RBP	10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	USP46	P62068	366 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	YWHAZ	P63104	245 aa	Known RBP	10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	SMAD3	P84022	425 aa	Known RBP	10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	PIGH	Q14442	188 aa	Predicted RBP	10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	CHRDL2	Q6WN34	429 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	DENND5B	Q6ZUT9	1274 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	HFE2	Q6ZVN8	426 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	BEND5	Q7L4P6	421 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	PEX26	Q7Z412	305 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	STKLD1	Q8NE28	680 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	KIF18A	Q8NI77	898 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	GPR152	Q8TDT2	470 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	UBE2Q2	Q8WVN8	375 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	RXFP2	Q8WXD0	754 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	ZNF592	Q92610	1267 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	SLC2A13	Q96QE2	648 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	TLR10	Q9BXR5	811 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	FBXO44	Q9H4M3	255 aa		10.05	□□□□□ -0.8
CACNA1A-223	ENST00000636058	CERS4	Q9HA82	394 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms