RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 ADGRE3Q9BY15 652 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 CLPBQ9H078 707 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 AXIN2Q9Y2T1 843 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 RHOBTB3O94955 611 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 KRT6AP02538 564 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 PDIA5Q14554 519 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 PLA2G4FQ68DD2 849 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 V9GYQ6 96 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 CCT8L1PA6NM43 557 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 NCK2O43639 380 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 EGFRP00533 1210 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 DCAF6Q58WW2 860 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 CCNJLQ8IV13 435 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 PIH1D3Q9NQM4 214 aaKnown RBP13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 IL12RB1P42701 662 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 HUNKP57058 714 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 ATAD3BQ5T9A4 648 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 USP17L6PQ6QN14 398 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 KLHL17Q6TDP4 642 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 C3orf62Q6ZUJ4 267 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 PADI4Q9UM07 663 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 AAR2Q9Y312 384 aaKnown RBP13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 RWDD3Q9Y3V2 267 aa13.62□□□□□ -0.23
SYNGAP1-208ENST00000629380 FAM25AB3EWG3 89 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 FAM25CB3EWG5 89 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 FAM25GB3EWG6 89 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 IGF2BP3O00425 579 aaKnown RBP eCLIP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 VPS4BO75351 444 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 PDE5AO76074 875 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 EYA4O95677 639 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 GPC1P35052 558 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 CDK20Q8IZL9 346 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 C1orf131Q8NDD1 294 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 TMEM237Q96Q45 408 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 TRIM51Q9BSJ1 452 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 MLPHQ9BV36 600 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 CHD2O14647 1828 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 CHRNA5P30532 468 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 RAD23AP54725 363 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 SLC18A3Q16572 532 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 TDRD10Q5VZ19 366 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 CASP12Q6UXS9 341 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 CELF1Q92879 486 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 SMAD5Q99717 465 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 ATP6V1B1P15313 513 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 MRPS25P82663 173 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 CDC16Q13042 620 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 TIGD7Q6NT04 549 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 EPHX4Q8IUS5 362 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 STARD8Q92502 1023 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 RAVER2Q9HCJ3 691 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 MIEF1Q9NQG6 463 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 LRG1P02750 347 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 TCN1P20061 433 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 BNC2Q6ZN30 1099 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 CYFIP1Q7L576 1253 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 TBC1D16Q8TBP0 767 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 SEC16BQ96JE7 1060 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 SERAC1Q96JX3 654 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 TRIP11Q15643 1979 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 TMEM120BA0PK00 339 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 PRR23AA6NEV1 266 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 CELF2O95319 508 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 ZNF682O95780 498 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 SLC11A2P49281 568 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 PRR5LQ6MZQ0 368 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 ULK2Q8IYT8 1036 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 AGAP3Q96P47 875 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 STRBPQ96SI9 672 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 NEK6Q9HC98 313 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 MAGEA13PA6NCF6 341 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 TMEM114B3SHH9 223 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 DYNC1LI2O43237 492 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 PRKAB2O43741 272 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 S100A9P06702 114 aaKnown RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 AMPD2Q01433 879 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 MAD2L1Q13257 205 aaPredicted RBP13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 GNA13Q14344 377 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 CAMK1DQ8IU85 385 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 NAT9Q9BTE0 207 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 ITIH6Q6UXX5 1313 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 LSP1P33241 339 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 RNF180Q86T96 592 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 SVOPQ8N4V2 548 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 KCTD17Q8N5Z5 321 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 GPRC5AQ8NFJ5 357 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 IL17RAQ96F46 866 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 BDH2Q9BUT1 245 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 LY9Q9HBG7 655 aa13.61□□□□□ -0.23
SYNGAP1-208ENST00000629380 SCARF1Q14162 830 aa13.6□□□□□ -0.23
SYNGAP1-208ENST00000629380 C2CD6Q53TS8 623 aa13.6□□□□□ -0.23
SYNGAP1-208ENST00000629380 GLB1LQ6UWU2 654 aa13.6□□□□□ -0.23
SYNGAP1-208ENST00000629380 SIK3Q9Y2K2 1263 aa13.6□□□□□ -0.23
SYNGAP1-208ENST00000629380 CACNA1CQ13936 2221 aa13.6□□□□□ -0.23
SYNGAP1-208ENST00000629380 P4HA2O15460 535 aa13.6□□□□□ -0.23
SYNGAP1-208ENST00000629380 TSC22D2O75157 780 aa13.6□□□□□ -0.23
SYNGAP1-208ENST00000629380 SETD9Q8NE22 299 aa13.6□□□□□ -0.23
SYNGAP1-208ENST00000629380 EVA1BQ9NVM1 165 aa13.6□□□□□ -0.23
SYNGAP1-208ENST00000629380 PDGFRAP16234 1089 aa13.6□□□□□ -0.23
SYNGAP1-208ENST00000629380 AP1S2P56377 157 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms