RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 ZMYM5Q9UJ78 669 aa11.75□□□□□ -0.53
DDX41-219ENST00000629036 CA14Q9ULX7 337 aa11.75□□□□□ -0.53
DDX41-219ENST00000629036 USP3Q9Y6I4 520 aa11.75□□□□□ -0.53
DDX41-219ENST00000629036 EML5Q05BV3 1969 aa11.75□□□□□ -0.53
DDX41-219ENST00000629036 SPTBN2O15020 2390 aa11.75□□□□□ -0.53
DDX41-219ENST00000629036 MYO18AQ92614 2054 aaKnown RBP11.74□□□□□ -0.53
DDX41-219ENST00000629036 ACACBO00763 2458 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 MAP1BP46821 2468 aaKnown RBP11.74□□□□□ -0.53
DDX41-219ENST00000629036 OTOL1A6NHN0 477 aaPredicted RBP11.74□□□□□ -0.53
DDX41-219ENST00000629036 KCNJ18B7U540 433 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 PI15O43692 258 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 RTN3O95197 1032 aaPredicted RBP11.74□□□□□ -0.53
DDX41-219ENST00000629036 PAEPP09466 180 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 GLULP15104 373 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 KIF11P52732 1056 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 SLC7A9P82251 487 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 FZD5Q13467 585 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 KCNJ12Q14500 433 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 KLHL40Q2TBA0 621 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 ARHGAP15Q53QZ3 475 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
DDX41-219ENST00000629036 CAVIN1Q6NZI2 390 aaKnown RBP11.74□□□□□ -0.53
DDX41-219ENST00000629036 SCD5Q86SK9 330 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 ARL14EPQ8N8R7 260 aaPredicted RBP11.74□□□□□ -0.53
DDX41-219ENST00000629036 SHC3Q92529 594 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 E2F7Q96AV8 911 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 ZFYVE19Q96K21 471 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 GCNAQ96QF7 691 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 FAM83CQ9BQN1 747 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 TUBGCP2Q9BSJ2 902 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 NDST4Q9H3R1 872 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 TBC1D17Q9HA65 648 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 NMUR1Q9HB89 426 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 HPS4Q9NQG7 708 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 ANO10Q9NW15 660 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 COMMD8Q9NX08 183 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 GMIPQ9P107 970 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 ARHGAP26Q9UNA1 814 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 CFAP47Q6ZTR5 3102 aa11.74□□□□□ -0.53
DDX41-219ENST00000629036 CHADO15335 359 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 CYP26A1O43174 497 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 GREM1O60565 184 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 PFKLP17858 780 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 AOC1P19801 751 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 EEF1GP26641 437 aaKnown RBP11.73□□□□□ -0.53
DDX41-219ENST00000629036 YWHAQP27348 245 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 GDI1P31150 447 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 MTIF2P46199 727 aaKnown RBP11.73□□□□□ -0.53
DDX41-219ENST00000629036 TUBP50607 506 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 KRT31Q15323 416 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 MLF2Q15773 248 aaPredicted RBP11.73□□□□□ -0.53
DDX41-219ENST00000629036 TAF12Q16514 161 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 GOLGA7BQ2TAP0 167 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 VWA3BQ502W6 1294 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 TMEM270Q6UE05 265 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 CCDC105Q8IYK2 499 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 CELF5Q8N6W0 485 aaKnown RBP11.73□□□□□ -0.53
DDX41-219ENST00000629036 ANKRD52Q8NB46 1076 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 RBBP8NLQ8NC74 664 aaPredicted RBP11.73□□□□□ -0.53
DDX41-219ENST00000629036 FLCNQ8NFG4 579 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 BPIFB1Q8TDL5 484 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 FBXO32Q969P5 355 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 WBP2Q969T9 261 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 JAKMIP2Q96AA8 810 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 HEXIM2Q96MH2 286 aaKnown RBP11.73□□□□□ -0.53
DDX41-219ENST00000629036 TRMT61BQ9BVS5 477 aaKnown RBP11.73□□□□□ -0.53
DDX41-219ENST00000629036 NAA15Q9BXJ9 866 aaKnown RBP11.73□□□□□ -0.53
DDX41-219ENST00000629036 FOXQ1Q9C009 403 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 KIF9Q9HAQ2 790 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 ACP6Q9NPH0 428 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 HEBP1Q9NRV9 189 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 TDP1Q9NUW8 608 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 FANCLQ9NW38 375 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 BAHCC1Q9P281 2608 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 APEX2Q9UBZ4 518 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 TSPAN16Q9UKR8 245 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.73□□□□□ -0.53
DDX41-219ENST00000629036 SCML2Q9UQR0 700 aa11.73□□□□□ -0.53
DDX41-219ENST00000629036 TRAV19A0A0A6YYK7 116 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 COCHO43405 550 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 VDRP11473 427 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 BRD2P25440 801 aaKnown RBP11.72□□□□□ -0.53
DDX41-219ENST00000629036 PLA2G4AP47712 749 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 PPP3CCP48454 512 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 RPL34P49207 117 aaKnown RBP11.72□□□□□ -0.53
DDX41-219ENST00000629036 CLCN5P51795 746 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 BCAT1P54687 386 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 YWHAEP62258 255 aaKnown RBP11.72□□□□□ -0.53
DDX41-219ENST00000629036 MYL5Q02045 173 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 TNK2Q07912 1038 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 PDE4CQ08493 712 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 IFRD2Q12894 506 aaPredicted RBP11.72□□□□□ -0.53
DDX41-219ENST00000629036 EXOC3L4Q17RC7 722 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 GAB4Q2WGN9 574 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 SLC44A4Q53GD3 710 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 SGO2Q562F6 1265 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 TXNDC11Q6PKC3 985 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 LCLAT1Q6UWP7 414 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 GBP6Q6ZN66 633 aa11.72□□□□□ -0.53
DDX41-219ENST00000629036 CCDC186Q7Z3E2 898 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms