RNA–Protein interactions for RNA: ENST00000628742.2

SOX9-AS1-218, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 733 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-218ENST00000628742 SPAARA0A1B0GVQ0 90 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 E2F8A0AVK6 867 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 C10orf142B7Z368 130 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 LEFTY2O00292 366 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 SLC9A3R1O14745 358 aaPredicted RBP7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 TRAK2O60296 914 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 GREM1O60565 184 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 KAT7O95251 611 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 IGLV3-19P01714 112 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 CKMP06732 381 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 ZDHHC11BP0C7U3 371 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 HDCP19113 662 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 ITPKAP23677 461 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 CYP2F1P24903 491 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 GBP1P32455 592 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 LHX1P48742 406 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 TUBP50607 506 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 SCAPQ12770 1279 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 ENPP2Q13822 863 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 DHCR24Q15392 516 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 DDR2Q16832 855 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 SOWAHAQ2M3V2 549 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 RILPL1Q5EBL4 403 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 EOGTQ5NDL2 527 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 SLC36A4Q6YBV0 504 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 ZNF720Q7Z2F6 126 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 OSTM1Q86WC4 334 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 C12orf40Q86WS4 652 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 SLC41A1Q8IVJ1 513 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 BRSK2Q8IWQ3 736 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 ALLCQ8N6M5 410 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 FRMD1Q8N878 549 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 ARL14EPQ8N8R7 260 aaPredicted RBP7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 FSIP1Q8NA03 581 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 OVCA2Q8WZ82 227 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 PIGKQ92643 395 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 C8orf48Q96LL4 319 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 PNKPQ96T60 521 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 GABRG3Q99928 467 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 ZDHHC5Q9C0B5 715 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 RNF38Q9H0F5 515 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 TOR4AQ9NXH8 423 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 AGO2Q9UKV8 859 aaKnown RBP7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 ITGA11Q9UKX5 1188 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 LIMCH1Q9UPQ0 1083 aa7.23□□□□□ -1.25
SOX9-AS1-218ENST00000628742 FLNCQ14315 2725 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 IGHV1OR15-9A0A0B4J2B8 117 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 NPHP3-ACAD11A0A0J9YXS1 232 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 FRMD3A2A2Y4 597 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 TISP43B9A030 160 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 E9PAM4 449 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 AP5Z1O43299 807 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 ZNF217O75362 1048 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 PRPF40AO75400 957 aaKnown RBP7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 GABRG2P18507 467 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 PCSK1P29120 753 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 DHPSP49366 369 aaPredicted RBP7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 ACOT2P49753 483 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 NEK4P51957 841 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 USP46P62068 366 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 GUCY1B3Q02153 619 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 GFPT1Q06210 699 aaPredicted RBP7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 PSMD2Q13200 908 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 TAF12Q16514 161 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 CCDC142Q17RM4 750 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 C2orf27AQ580R0 203 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 SCARA3Q6AZY7 606 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 TMPRSS7Q7RTY8 843 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 TMEFF1Q8IYR6 380 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 CHCHD4Q8N4Q1 142 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 MINDY1Q8N5J2 469 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 TXNDC5Q8NBS9 432 aaKnown RBP7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 LSM14AQ8ND56 463 aaKnown RBP7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 GLIS3Q8NEA6 775 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 YTHDC1Q96MU7 727 aaKnown RBP7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 PI4K2AQ9BTU6 479 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 POLMQ9NP87 494 aaPredicted RBP7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 CRTAC1Q9NQ79 661 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 OLFML3Q9NRN5 406 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 TMEM30AQ9NV96 361 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 DDX43Q9NXZ2 648 aaKnown RBP7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 EHD2Q9NZN4 543 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 MARK1Q9P0L2 795 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 TBC1D14Q9P2M4 693 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 FBXO10Q9UK96 956 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 GTF3C4Q9UKN8 822 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 PCOLCE2Q9UKZ9 415 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 INVSQ9Y283 1065 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 PCDHGB2Q9Y5G2 931 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 MORC2Q9Y6X9 1032 aaPredicted RBP7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 TCHHQ07283 1943 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 COL6A6A6NMZ7 2263 aa7.22□□□□□ -1.25
SOX9-AS1-218ENST00000628742 CEP192Q8TEP8 1941 aa7.21□□□□□ -1.25
SOX9-AS1-218ENST00000628742 MYMKA6NI61 221 aa7.21□□□□□ -1.26
SOX9-AS1-218ENST00000628742 GFRA2O00451 464 aa7.21□□□□□ -1.26
SOX9-AS1-218ENST00000628742 PAPSS1O43252 624 aaPredicted RBP7.21□□□□□ -1.26
SOX9-AS1-218ENST00000628742 CACNG3O60359 315 aa7.21□□□□□ -1.26
SOX9-AS1-218ENST00000628742 OPHN1O60890 802 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms