RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 BDNFP23560 247 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 MCM3P25205 808 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 PPM1AP35813 382 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 MATKP42679 507 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 MAGEA11P43364 429 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 MARCKSL1P49006 195 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 TAS2R40P59535 323 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 COPS2P61201 443 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 YWHAZP63104 245 aaKnown RBP7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 SLC25A11Q02978 314 aaKnown RBP7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 C2orf54Q08AI8 447 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 ZNF211Q13398 564 aaPredicted RBP7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 BTG3Q14201 252 aaPredicted RBP7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 SMC1AQ14683 1233 aaKnown RBP7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 ELF2Q15723 593 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 CCDC142Q17RM4 750 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 USP41Q3LFD5 358 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 CCDC14Q49A88 953 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 ZFYVE27Q5T4F4 411 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 KCNT2Q6UVM3 1135 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 VSTM1Q6UX27 236 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 LRRTM3Q86VH5 581 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 CPNE8Q86YQ8 564 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 EMC1Q8N766 993 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 ZMIZ2Q8NF64 920 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 C2orf15Q8WU43 125 aaKnown RBP7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 IRGQQ8WZA9 623 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 BADQ92934 168 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 TMEM169Q96HH4 297 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 IGSF21Q96ID5 467 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 RUNDC3BQ96NL0 473 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 TMEM209Q96SK2 561 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 YME1L1Q96TA2 773 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 DDX23Q9BUQ8 820 aaKnown RBP7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 RC3H2Q9HBD1 1191 aaKnown RBP7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 RRN3Q9NYV6 651 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 SMARCAL1Q9NZC9 954 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 SPG21Q9NZD8 308 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 EHD2Q9NZN4 543 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 HCSTQ9UBK5 93 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 PCDHB5Q9Y5E4 795 aa7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 V9GYY5 206 aaPredicted RBP7.9□□□□□ -1.14
PTP4A1-206ENST00000627002 KIAA0100Q14667 2235 aaKnown RBP7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 NT5C1B-RDH14C9J2C7 533 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 FSCN2O14926 492 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 PRPSAP2O60256 369 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 TBC1D4O60343 1298 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 GRAP2O75791 330 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 TRUB2O95900 331 aaKnown RBP7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 EFEMP2O95967 443 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 SOD2P04179 222 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 KRT1P04264 644 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 CPB1P15086 417 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 NOS2P35228 1153 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 PTPN7P35236 360 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 GJC1P36383 396 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 FLT3P36888 993 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 GRIK1P39086 918 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 PBX3P40426 434 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 CACNA2D1P54289 1103 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 DAOAP59103 153 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 ADCY1Q08828 1119 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 GPR17Q13304 367 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 SLC25A52Q3SY17 297 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 BOLA3Q53S33 107 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 PM20D1Q6GTS8 502 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 KIAA1841Q6NSI8 718 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 C8orf74Q6P047 294 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 FAM117BQ6P1L5 589 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 ZNF365Q70YC5 407 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 BEND5Q7L4P6 421 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 STRADAQ7RTN6 431 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 OTOP2Q7RTS6 562 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 TMEM173Q86WV6 379 aaPredicted RBP7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 SLC13A5Q86YT5 568 aaPredicted RBP7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 CCDC50Q8IVM0 306 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 GPR65Q8IYL9 337 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 RNF168Q8IYW5 571 aaPredicted RBP7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 C7orf61Q8IZ16 206 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 SLC39A11Q8N1S5 342 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 COLGALT1Q8NBJ5 622 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 NOA1Q8NC60 698 aaKnown RBP7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 CCDC26Q8TAB7 109 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 PHOSPHO2Q8TCD6 241 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 SPPL2BQ8TCT7 592 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 CLEC4CQ8WTT0 213 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 BCL7CQ8WUZ0 217 aaPredicted RBP7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 PIK3R5Q8WYR1 880 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 KHSRPQ92945 711 aaKnown RBP eCLIP7.89□□□□□ -1.152e-7■■■□□ 18.2
PTP4A1-206ENST00000627002 FAM149B1Q96BN6 582 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 PIWIL1Q96J94 861 aaKnown RBP7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 C8orf48Q96LL4 319 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 CEP295NLQ96MC4 621 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 CFAP57Q96MR6 1250 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 SLC2A13Q96QE2 648 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 KCNK16Q96T55 309 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 HERC2P3Q9BVR0 1158 aa7.89□□□□□ -1.15
PTP4A1-206ENST00000627002 ULBP1Q9BZM6 244 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms