RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 FBXL6Q8N531 539 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 CSGALNACT1Q8TDX6 532 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 KCTD13Q8WZ19 329 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 KREMEN1Q96MU8 473 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 TRIM62Q9BVG3 475 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 NACA2Q9H009 215 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 KCNH6Q9H252 994 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 LRRC4Q9HBW1 653 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 TMEM30AQ9NV96 361 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 TAB2Q9NYJ8 693 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 ARIH1Q9Y4X5 557 aaPredicted RBP14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 TECTAO75443 2155 aa14.77□□□□□ -0.05
SNRPA1-216ENST00000626000 LGALS16A8MUM7 142 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 SLC9A3R1O14745 358 aaPredicted RBP14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 SART1O43290 800 aaKnown RBP14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 ABL1P00519 1130 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 OAS1P00973 400 aaKnown RBP14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 CFHP08603 1231 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 RALAP11233 206 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 GDI1P31150 447 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 VIPR2P41587 438 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 IFRD2Q12894 506 aaPredicted RBP14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 HSP90AA4PQ58FG1 418 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 PIGZQ86VD9 579 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 SIX5Q8N196 739 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 SIX6OS1Q8N1H7 587 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 AOPEPQ8N6M6 819 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 USP13Q92995 863 aaPredicted RBP14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 HSFY1Q96LI6 401 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 C8orf33Q9H7E9 229 aaPredicted RBP14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 CYLDQ9NQC7 956 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 CLIC5Q9NZA1 410 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 DNAJC12Q9UKB3 198 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 CEP83Q9Y592 693 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 USP3Q9Y6I4 520 aa14.76□□□□□ -0.05
SNRPA1-216ENST00000626000 HELZP42694 1942 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 SYCE3A1L190 88 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 HHLA1C9JL84 531 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 NCAM2O15394 837 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 NARSO43776 548 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 BEST1O76090 585 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 PRAMEF12O95522 483 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 GNA15P30679 374 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 MAGEA9P43362 315 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 ACADSBP45954 432 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 COPB1P53618 953 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 USP4Q13107 963 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 NCAPHQ15003 741 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 MLF2Q15773 248 aaPredicted RBP14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 RAB41Q5JT25 222 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 SCAMP5Q8TAC9 235 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 STK32AQ8WU08 396 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 GOLGA1Q92805 767 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 KAT5Q92993 513 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 NOX5Q96PH1 765 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 LRFN3Q9BTN0 628 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 FUCA2Q9BTY2 467 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 RPP25Q9BUL9 199 aaKnown RBP14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 OSBPL6Q9BZF3 934 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 VPS16Q9H269 839 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 CNGB3Q9NQW8 809 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 MYO16Q9Y6X6 1858 aa14.75□□□□□ -0.05
SNRPA1-216ENST00000626000 GOLGA6L19H0YKK7 550 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 M0QYV0 167 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 TLR5O60602 858 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 FBXO21O94952 628 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 UCHL3P15374 230 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 ATP5C1P36542 298 aaKnown RBP14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 USP8P40818 1118 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 STARD6P59095 220 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 PDE4CQ08493 712 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 NR1H3Q13133 447 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 GRM2Q14416 872 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 MTF1Q14872 753 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 ARHGAP44Q17R89 818 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 ZSCAN23Q3MJ62 389 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 PKDCCQ504Y2 493 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 SLC44A4Q53GD3 710 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 KLHDC7AQ5VTJ3 777 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 PM20D1Q6GTS8 502 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 TTC30AQ86WT1 665 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 ARL14EPQ8N8R7 260 aaPredicted RBP14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 IRGQQ8WZA9 623 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 ATP2A3Q93084 1043 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 OTUB2Q96DC9 234 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 ERGIC2Q96RQ1 377 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 STK33Q9BYT3 514 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 PLA2G2FQ9BZM2 168 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 SIX2Q9NPC8 291 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 C11orf16Q9NQ32 467 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 OLA1Q9NTK5 396 aaKnown RBP14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 GMIPQ9P107 970 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 TBC1D14Q9P2M4 693 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 HCN4Q9Y3Q4 1203 aa14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 KIF26AQ9ULI4 1882 aaPredicted RBP14.74□□□□□ -0.05
SNRPA1-216ENST00000626000 C2orf78A6NCI8 922 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 NRG2O14511 850 aaPredicted RBP14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 THAP12O43422 761 aa14.73□□□□□ -0.05
SNRPA1-216ENST00000626000 ZBED1O96006 694 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms